Eucyclogobius newberryi (tidewater goby): 140367788
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Entry
140367788 CDS
T10929
Symbol
tnpo1
Name
(RefSeq) transportin-1
KO
K18752
transportin-1
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140367788 (tnpo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eny03019
]
140367788 (tnpo1)
03009 Ribosome biogenesis [BR:
eny03009
]
140367788 (tnpo1)
Messenger RNA biogenesis [BR:
eny03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
140367788 (tnpo1)
Ribosome biogenesis [BR:
eny03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
140367788 (tnpo1)
Pre-60S particles
140367788 (tnpo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TPR_IMB1
HEAT_GCN1
HEAT_2
Arm
TOR1L1_N
IBN_N
Vac14_Fab1_bd
TPR_IPO5
Cnd1
HEAT_EF3_N
TPR_DNAAF5
HEAT_MROH2B_C
PDS5
Adaptin_N
HEAT_GCN1_C
HEAT_Maestro
CEP104-like_TOG
MMS19_C
Ltn1_1st
Dopey_N
INTS7_N
VPS15-like_hel
HEAT_MROH2B_1st
TPR_TTI1_C
HEAT_DAAF5
FliT
Motif
Other DBs
NCBI-GeneID:
140367788
NCBI-ProteinID:
XP_072310555
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MECEWKPDQQGLQQILQLLKESQSPDTSMQRSVQQRLEQLNQYPDFNNYLIFVLTKLKTE
DEPTRSLSGLILKNNVKAHYQNFPNGVCDFIKNECLQSIGDSSPLIRATVGILITTIASK
GELQNWPELLPKLCLLLDSEDYNTCEGAFGALQKICEDSAEILDSDMLDRPLNILIPKFL
QFFRHSSPKIRSHAIACVNQFIICRTQALMLHIDPFIENLFALATDEEPEVRKNVCRALV
MLLEVRLDRLLPHMHNIIEYMLQRTQDPDENVALEACEFWLTLAEQPVCKEVLSGHLSQL
TPVLVNGMRYSEIDIILLKGDIEEDETVPDNEQDIRPRFHRSRTVAQHHEGESIEEDEDD
EDELDDTISDWNLRKCSAAALDVLANVFRDDLLVHLLPLLKELIFHSDWIVKESGVLVLG
AIAEGCMQGMITYLPELIPHLIQFLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLM
TELLQRILDSNKRVQEAACSAFATLEEEACTELVPYLAFILDTLVFAFSKYQHKNLLILY
DAIGTLADSVGHHLNKQEYIQMLMPPLIQKWNQLKDEDKDLFPLLECLSSIATALQSGFL
PYCEPVYQRCVNLVQKTLAQAMLHQSQPDQYDPPDKDFMIVALDLLSGLAEGLGETIEHL
VARSNVLTLLYQCMQDKMPEVRQSSFALLGDLTKASFQHVKPCIADFMPILGRNLNPELI
SVCNNATWAIGEISIQMGPEMQPYIAIVLQQLVEIINRPNTPKTLLENTAITIGRLGYVC
PQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPGGVVQDFIFFCDAVASW
VNPKDDLKDMFYKILHGFKNQVGEDNWKRFSDQFPMPLKERLATFYGV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgagtggaaaccagaccaacaaggacttcagcagatcctgcagcttctgaag
gagtcccagtctcctgacacgtccatgcaaagatccgtccagcaaagactagaacaattg
aaccagtatccagacttcaacaactatttaatatttgtcctgacaaagttgaaaactgaa
gatgaaccaacacgatcgctcagtggacttattctaaaaaacaatgtaaaagctcattat
cagaatttccccaacggtgtgtgtgacttcatcaagaatgaatgtctgcaaagcatcggc
gactcgtctccgctcatccgggccactgtaggtatccttatcaccactattgcctccaag
ggcgagctccagaactggccagaacttctccccaaactctgcttgcttttggattctgag
gactataatacatgtgagggagcatttggagctcttcagaaaatctgtgaagactctgca
gagatcctagacagtgatatgctggatcgcccactcaatattttgatcccaaagtttcta
caattctttaggcacagcagccctaaaattagatctcatgctattgcctgtgtaaatcaa
ttcatcatctgcagaactcaggctcttatgctgcatattgatcctttcattgagaatctg
tttgctctagcaacagacgaggaaccagaagtgaggaaaaatgtgtgcagagctcttgta
atgttattagaggttcgcctcgaccgactccttccacacatgcataacataattgagtac
atgctacagaggactcaagatccagatgaaaacgtagccttggaggcgtgtgaattctgg
ttgactctcgcagagcagccagtgtgcaaagaagtacttagtggtcacctctctcaactt
actccagtacttgtaaatgggatgaggtactctgagattgacattatattactcaaggga
gacatagaggaagatgagaccgtacctgacaatgagcaggacatcagacctcgctttcac
cgctcgcgcaccgtggcccagcatcatgagggcgagagtattgaagaagatgaggatgat
gaagatgaacttgatgacaccatttcagactggaacctgcgtaaatgttcagccgcagcc
ttggatgttttggccaatgtattcagagatgaccttttggttcaccttttgcctcttcta
aaggaacttattttccactcagactggatagtaaaagagtctggtgttttagttctgggt
gctatagctgaaggttgtatgcagggcatgattacatacttgcctgagctcatacctcac
ctcatccagtttctatctgacaagaaggctttggtgcggtccatcacctgttggaccctc
agccgctatgctcactgggttgtaagccaacctccagatacttacctaaagcctctgatg
acagaacttcttcaaagaattctagacagcaacaagcgtgttcaggaggctgcttgtagt
gcctttgcaactttggaagaggaggcatgcacagagctagtaccttaccttgcatttatt
ttggacacattagtgtttgctttcagcaaataccaacataagaatctccttatactgtat
gatgccatagggacacttgctgattcggtgggccaccacctcaataaacaggaatacatt
cagatgctgatgcccccattgattcaaaagtggaaccagctcaaagatgaagacaaagat
ctttttccattattagaatgtttgtcctccattgccactgcccttcagagtggtttcttg
ccgtactgtgaacccgtataccaacgctgtgtcaacctagtccagaagacacttgcacaa
gccatgcttcaccagtcacagccggaccagtatgaccctcctgataaggacttcatgatc
gtggctttagatcttcttagtgggctggctgaaggtttgggtgaaactattgagcacttg
gttgcccgtagcaacgttctcactctcctgtaccagtgtatgcaggacaaaatgccagaa
gttcgtcagagttcgtttgctcttctcggagatctgacaaaagccagtttccagcatgtt
aaaccgtgcattgctgattttatgcctatacttggtagaaacctaaacccagaattgatt
tcagtttgcaataatgcaacgtgggcaataggtgaaatatccattcaaatggggcctgaa
atgcagccatacattgccatagtgctgcaacagctggtggagatcattaacagacccaat
actccaaagacactactggagaacacagcaataacaattggtcgtcttggttacgtttgt
cctcaagaggtggcacccatgctacagcagtttataagaccctggtgcacatctttacga
aatataagagacaatgaggagaaggactcggctttcagaggaatttgcactatgatcagt
gtgaacccaggaggtgttgttcaggatttcatatttttctgcgatgctgtggcttcctgg
gtaaatccaaaagatgatcttaaagacatgttttataagattcttcatgggtttaagaac
caggtcggagaagacaactggaagcgtttctcagatcagttccccatgcctctaaaggaa
cggctggcgacattttatggggtgtaa
DBGET
integrated database retrieval system
