Eucyclogobius newberryi (tidewater goby): 140367899
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Entry
140367899 CDS
T10929
Symbol
taf1c
Name
(RefSeq) TATA box-binding protein-associated factor, RNA polymerase I, subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
eny Eucyclogobius newberryi (tidewater goby)
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eny03021
]
140367899 (taf1c)
Transcription machinery [BR:
eny03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
140367899 (taf1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
Cementoin
Motif
Other DBs
NCBI-GeneID:
140367899
NCBI-ProteinID:
XP_072310767
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MDREFPSVLFPGFYNTGPPVTGLGHCAGSWGSYSRVRPDGTRSFLSQHAAAGETWSHTEP
VPVPLLPPKHNLFWSSTPADPLDFSDHLQNFLVDHSADAFCPMANVLGQTMTFRKEAQKI
NMCESDFMDKLRSKDCTLSTRSAHLDACSRLLSDTLHLVPVELLGSLLHEELSQQKRDAA
FCEANTGGALDFIPLAPGASEGPLSGCLVYSSNRADKLCFQQVALTPRAVLCSDEVSSFI
LKGPAHQISSESVCGHSCVAVRSLYHCGVWSVTSAQGPHLLQALSSAEALSCTSLSPHVV
GELLVVNESGAAFLWSLGHGKQQVRTEDSNLYFNSQSSWRWCQFSAHPRVILYADRTGAE
LTDIRVQPSSSCHTLFRISRAAECRSGERLLLCHYLSPVHTFHHLVCTQYSAYIMDERVP
CVPMLKCDHMMEAPPVFCHALPSSAPHSGGTAKILLGSQRSQEVTLLQYSGGRAEACVSR
GPVQALLRPRDSLQHLSTQLPHRTKASQDRLAHLATGLAAASLRNVASEERFCVFQLLQT
GDIFYQILEKEESAGTGPSVCGQRGPPLSSDSLSVWRQWLQRLARNHHGNEKKPGHAMVK
CHLQMSQPKSRRRRQQHPGTSQHPGTSQHPGTSQHPGTSQHPGTSQHPRSAPPGLTEEVV
PLTEDVLPKEWGDDLSSRLTASWDNEEGWHAWWSERLGVNRAEKMQALRRRRRKEKEVKR
ASGLTLLAMSGSFTSSVSYQSDLSELSDWAWSDSGGAGLHSEDTPERRRLTPVPAASEET
EVLARPLVEAPSVERRPQHLQFQTPGPKPVESTREAFSWSSQGQSRSPSLSQSLSQSLSL
SSQLKKKSRMGF
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtgagtttccctcggttctgttcccgggcttctacaacaccgggcccccggtg
acgggtctgggacactgcgccggctcctggggaagctacagccgggtccgacccgacgga
acacggagcttcctgtcccagcacgctgcagctggagagacttggagccacacggagcct
gtcccggtgccgctgctcccgcccaaacacaatttattttggtcttcaacacctgccgat
cctctggacttcagtgaccacttgcagaatttcttggtggaccactctgcagacgccttc
tgtcccatggccaacgtcctgggacaaactatgacgtttagaaaagaagctcagaagatc
aacatgtgtgagagcgacttcatggacaagctccggtccaaagactgcaccctgagcacc
cgctcagctcacctggacgcctgcagccgcctgctctctgacactctgcatctcgtcccg
gtggagctgctcgggtcactgctgcacgaggagctcagtcagcagaagcgagacgctgcg
ttctgcgaggccaataccggaggggccctggacttcatccctttggcccccggggcatcg
gaggggcctctgtccgggtgtctggtctactcctccaatagagcggacaaactgtgcttc
cagcaggtggcgctcacacctcgggccgtgctctgctcagatgaagtgagcagcttcatc
ctcaaaggccccgcccaccagatcagctctgagtctgtgtgtggacacagttgtgtggcg
gtgcgttctctgtaccactgtggcgtctggagtgtgacctcagcacaggggcctcacctg
ctgcaggccctgtcttctgcagaggccctcagctgcaccagcctcagtcctcatgttgta
ggggaactgctggtggtcaatgagagcggagcggccttcctgtggagcctgggacacggg
aagcagcaggtgcgcacagaggactccaacctgtacttcaacagccagtcgtcatggcga
tggtgccagttctccgctcaccccagagtgatactttatgctgacaggacgggggcggag
cttacagacatcagggtgcagccgtcctcgtcctgccacaccctgttccgcatcagccgc
gctgcagagtgtcgcagcggagagcgccttctgctctgccactacctgagcccagtgcac
accttccaccacctcgtctgcactcagtactctgcatacatcatggatgagcgcgtcccc
tgcgtgcccatgctcaagtgtgaccacatgatggaggccccgcccgtgttctgccacgcc
ctgcccagctctgctcctcactctggaggaaccgccaagatcctgctgggctcgcagagg
tcccaggaggtgaccctactgcagtactcaggaggaagggcagaggcctgtgtgagtcga
ggccccgtccaggccctgctgaggcccagggacagtctacagcacctgtccactcagctg
ccccacaggacaaaggcgtcccaggacaggctggcccaccttgccacaggtttggccgcc
gcctctttgaggaacgtcgcgtctgaagaacgtttctgtgttttccaacttctacaaact
ggagacattttctatcaaatcctggagaaggaggagtcagcagggacgggcccttcagtc
tgcggccagaggggccccccactcagctcagactcactgtccgtctggagacagtggctc
cagagactggcgaggaatcaccacggcaacgagaagaaacctggtcacgccatggtgaaa
tgtcaccttcaaatgtcccaacccaaaagcagaaggagacggcagcagcacccggggacg
tcccagcacccggggacgtcccagcacccggggacgtcccagcacccggggacgtcccag
cacccggggacgtcccagcacccgcgctccgctccgcccggcctcaccgaggaggtggtg
ccactgactgaagatgtgctgcccaaagagtggggcgacgacctgagcagcagactgacg
gcgtcctgggacaacgaggagggctggcacgcctggtggagcgagcgtctgggcgtcaac
cgagcggagaagatgcaggcgctgaggaggaggcgcaggaaggagaaggaggtgaagagg
gccagcggactcactctgctggccatgtccggcagtttcacctcctccgtcagctaccag
tccgacctgagcgagctgagcgactgggcgtggtcagactcaggaggggcggggctacac
tctgaagacactccagagaggcggaggctcaccccggtgcccgcggcctcggaggagacg
gaggtcctggcacggcccctggtagaggcccccagcgttgaaagaagacctcagcacctt
cagtttcagaccccggggcccaaacctgtcgagtccacgagagaagccttcagctggtcc
tcacagggccagtcccggtccccgtccctgtcacagtcgctgtcccagtccctgtccctg
tcctctcagctcaagaagaagtctcggatgggattttag
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