Eucyclogobius newberryi (tidewater goby): 140369410
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Entry
140369410 CDS
T10929
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
140369410 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eny03400
]
140369410 (msh2)
DNA repair and recombination proteins [BR:
eny03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
140369410 (msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
140369410
NCBI-ProteinID:
XP_072312862
LinkDB
All DBs
Position
Unknown
AA seq
932 aa
AA seq
DB search
MAVQPKQNLSMDSAAESGFLSFYFSMSDKPDTTFRVFDRNDYYTVHGKDATFAAKELFKT
NGVLKYLGSGKRRLESVVLNKLNFETFVKDLLLVRQYRVEVFKNQSKNSKEQDWKLEYKA
SPGNLSQFEDILFGGGSGAEGCAGVVAVRYATAADGQRVVGVGYVDAAQRIMGVCEFPDN
EIFSNLESLLVQISAKECLLPQGECSSEGSKLREVVQRGGVLVSERKRADFSSKDIVQDL
NRLLRSKKGETVASNTLPELDKQVGVSCLAAVVRFLELLSDESSFNSFCLKPLELGQYMR
LDNAAVRALNLFQGSPDDTSGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMDRSKIEERLD
LVESLVCDSELRQTLQDDLLRRVPDLHRLAKKFHRHSATLQDCYRVYQAVSQVPNVIGAL
EGNSGSYVVLLEAVFLTPFRDLQNDFVKFQEMIETTLDMNQIEHHEFLVKPSFDPVLSEL
RETMDDLEKNMQSVLSGAAKDLGLEAGKTVKLESNALHGFYLRVTCKEEKSLRNNKKFTT
LDVQKNGVRFTNGKLSSLNDVYTRSREEYEEAQNAIVKEIIGIASGYVDPLQTLGDVVAQ
LDAVVSFATASVSAPIPYVRPRLLEQDGARRLELVQARHPCMEMDADTAFIPNDIRFTHG
EESFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCERAELSVIDSVLARVGAGDSQVK
GVSTFMSEMLETAAILRSATQNSLIIIDELGRGTSTYDGFGLAWAISEHISSQIGCFCLF
ATHFHELTALAGQRPGVRNLHVTALTSHDTLTMLYKVKPGVCDQSFGIHVAELACFPAAV
VAAAKEKASDLEEFQELAAEESEEGPGAKRRRTDKQVGEGLIVDFLERVRSLPVCNMADA
AVKAELKRMKEELAAKDNGYISEILKRCASVK
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaacagaacctgtccatggacagtgctgccgagagcggcttcctc
agcttttatttctctatgtccgacaaaccggacactacgttcagagtgttcgaccggaac
gactactacaccgtgcacgggaaagacgccacgtttgcagcaaaagagcttttcaaaacc
aatggagttctgaagtatctgggctcagggaagcgcagactggagagcgtggtgctgaat
aaactcaactttgagacgtttgtgaaagacctgctgctggtgcggcagtatcgagtggag
gtgttcaagaaccagagcaagaacagcaaggagcaggactggaagctggagtacaaggcg
tctcctgggaacctgagccagtttgaggacatcttgtttggcggcgggtccggagcagag
ggctgcgccggagtcgtggcggtgcgatacgccacggccgccgacggacaacgggtggtg
ggagtgggctacgtcgacgcggcgcaaaggatcatgggagtctgcgagttccccgacaac
gagatcttctcaaacctggagtcgctgctggtccagatcagcgctaaagagtgtctgctg
cctcagggcgagtgcagctctgagggcagcaaactccgagaggtggtgcagcggggcgga
gtcctggtgtctgagcggaaaagagccgacttcagcagcaaagacatcgtgcaggatctg
aaccgactgctccggtccaagaagggagagaccgtggccagcaacacgctgcccgagctc
gacaaacaggtgggcgtgtcgtgtttggctgccgtggtgcggtttttggagcttctttct
gacgagtccagcttcaactcgttctgtctgaaaccgctggagctcgggcagtacatgaga
ctggacaacgccgcggtcagggccctcaatctgttccagggctcccctgacgacaccagc
ggcgctcactcattggccggtttgttgaataaatgcaggactcctcagggccagcgcctc
gtgaaccagtggatcaaacagccactgatggacagatccaagatagaagagaggctggac
ctggtggagagtttggtgtgcgactcagagctcagacagaccctccaggacgacctgctg
cggcgcgtcccggacctccaccgtctggccaagaagttccaccgtcactcggcaacgctg
caggactgctacagggtctaccaggccgtgagccaggtccccaacgtcatcggcgcgctg
gaggggaactcaggaagttacgtggtgcttctggaggccgtgtttctcactccgtttaga
gatctgcaaaacgactttgtcaagtttcaagagatgatcgaaaccactctggacatgaac
cagatcgagcaccacgagtttctggtgaagccctcgttcgacccggtgctgagtgagctg
agggagacgatggacgacctggagaagaacatgcagagcgtcctgagcggcgccgccaaa
gacctgggccttgaagctggaaaaacggtgaagctggagtcgaacgctctccacggcttc
tacctccgagtcacgtgtaaagaggagaaaagtctgaggaacaacaagaagttcacgacc
ctggacgtgcagaagaacggcgtgcgattcacaaacggcaaactcagctccctgaacgac
gtctacaccaggagccgcgaggagtacgaggaggcccaaaacgccatcgtgaaagagatc
atcggcatcgcctcaggctacgtggaccctctccagaccctgggtgacgtggtggctcag
ctggacgcggtggtcagctttgccacggcctcggtctccgctccgatcccgtacgtcagg
ccccgcctcctggaacaggatggcgcccggcggctggagctggtccaggccagacacccg
tgtatggagatggacgccgacacggccttcatccccaacgacatccgcttcacccacgga
gaggagagcttctacatcatcacaggtccaaatatgggcggtaagtccacgtttatccgt
caggtgggcgtgatcgcgctcatggctcagatcggctgcttcgtcccgtgcgagagggcg
gagcttagcgtgatcgacagcgtcctggcccgagtgggagccggggacagtcaggtcaaa
ggagtctccaccttcatgtccgagatgctcgagacggcggccattttgcgctcggccaca
cagaactccctgatcatcatcgatgagttgggccgcggcacctccacgtacgacggcttc
ggtttggcgtgggccatctccgagcacatctcgtcccagatcggctgcttctgcctgttc
gccacgcacttccacgagctgacggcgctcgccggccagcggcccggcgtccgcaacctg
cacgtgacggccctcacctcccacgacacgctcaccatgctctacaaggtcaaaccagga
gtgtgcgaccagagcttcgggatccacgtggcggagctggcgtgtttcccggcggcggtg
gtggcggcggcaaaggagaaggcgtccgacctggaggagtttcaggagcttgcggcggaa
gagtccgaggaaggtccaggggccaagaggagacgcactgacaaacaggtcggcgaaggc
ctgatcgtggacttcctggagagggtgaggtcacttcctgtctgcaacatggccgacgcg
gcggtgaaggcggagctgaagaggatgaaggaggagctggcggctaaagacaacggctac
atctctgagatcctaaaacgatgtgcgtctgtgaaataa
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