Eucyclogobius newberryi (tidewater goby): 140369548
Help
Entry
140369548 CDS
T10929
Symbol
tnrc6ba
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
eny Eucyclogobius newberryi (tidewater goby)
Brite
Messenger RNA biogenesis [BR:
eny03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140369548 (tnrc6ba)
Chromosome and associated proteins [BR:
eny03036
]
Eukaryotic type
Gene silencing
piRNA pathway
140369548 (tnrc6ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
140369548
NCBI-ProteinID:
XP_072313017
LinkDB
All DBs
Position
Unknown
AA seq
2032 aa
AA seq
DB search
MEDKKRKKDEKRKREASQKVIEQKNKVPDLTKPTSVQSPATQSSSASPSPGPTPSASPSP
GTSGSGSAAPSQGGNNAKRLLVANGQPTSISSSSSTTGGPSATGNGTSSSGGGAQTPQQQ
PRYMPREVPPRFRCQQDHKVLLKRGQPPLSSMLLGGGGGDSPNANLAVSESGAAASTLAL
TSSSVAASTTTTSNYANSMWGVSSGSQASSQGREKVIVDGNDLEEWPSIAGSEGGGSGGS
NNNNNGMSVNSTSASGNQPSPTSSLSLPNECMQSPSGVAWGTAASQGHLGGGSAVAMSGP
SSLSKASTVPGSHDASGPMEGNSGIPGANLNPNANPSAWPALVQQDESAASGEGGPSSFQ
HQGPGGPLSANNTSLGLGMLGGQSPLSVNQSSAHQHQLHQMQSRDGKWDSESVGPNTTGG
EGPGGVVDRSGIGGDHSLVSSWRGQPSFPASNSKMGASRTDGWDTGGGTGVFAAAEGDNG
TSGWGYPGSTSGVNAWGNVGGNTNQTSGVSQGGWGSDRGAPNNDWGGGGGEVKGESASSN
SGVCTTGIPPTSASSSLSTNMSRAWDNQKGEGESGEWVGGQDAQGGSSSSGGNSRAGSGP
NSGNGRSRRPPPNADAALQTLLNRSDLDPRVLSNTGWGQTQIRQNTTWDVENLGQNKLGS
KPTSSGGGSSQFPAPRSTISESMASSAGSTGEGWESSSNSSSSGASISGRGPPTSGPNTR
NVNMPQSGPVSSTGPVIGSGALSGPTQQGTATGWGRTGTGESQEAKGWGNEEWRDARPGN
GGGWGNPGQQGEPQGGGWGEGQEEKGTGGWKELGGDARGSGWGSGQKVRTGRDWGEQERK
SNGGGWEDERKNGPGNSGGDSGGGGWGSWDENGPRRNWGAGGTGGGGSAGGGMGVIGSKS
HQGWSGGNKMHQMPNSQSGPVTGPQAQLQQQQSQPRNQHPQQALDQGVMQGAMGRKPMPP
AQNQSSGWTSGPIPSGSVGSGPEPSGWEEPSPQSISRKSDFDDGTSAWGDPTNYNFKPVN
LWDKNNPNPNGSQSQSQGQTPHQPQGPTGQPPPNRQPPALGGNFSTAHGPGKAPALGPSG
WGGTSPPSPSVDKGTAAWGKPTDAPTGWGDPEDVGGKSHPVGWGSSSPNPMKSGSKSMQD
GWGDKEGSVAASRHSSWEEEEEGGGMWNSAGSQGSGSSWGQGSNGGWGQSHSGKKPNNKG
PLKSGDSWMGPLNRQFSNMGLMNDDPGGSSMDLATNSLQDKKMDAEKRGMSMNDYNGDMR
KVGRGGVGMGYRSSGAKDAPGDAGSFYDKTMPLTNQDGFLGDEGSLNTSPIFYKPHSLFN
HTLPLRQGSHGIFGNVGGMPQSRHQPSVPPMNQSPGIRAQVPHQFVSPQVPGPVLKQMPP
PSGSVGGVGAVGGVAGVGGGVFPPQLSPQHIAMLGSIYPPHIQFQLACQLLLQQPQQQQQ
QQQQQQQLLQNQRKFTPNVRQQADPQQLARIMAVLQQQRQQQQVGGLGGSSKLSPSHLTA
GGVGHKIPMDPLSHSGLSGSVADLQQKTHGPYSGFGSGMNLSGFDLGSSVIGGPGPMKDF
GAQQSRFKWMMEGQSSPDSSHAENAFHKNGPVTPMKMPGGSPYSPYDMMVGDGLGDNWHR
TPGNKMGAKATTAPSWPPEFQPGVPWKGIDRVDPDTDPYITPAMMGNAVSPGLNDNEHQL
LDNTDSTPPLNTLLPSPGAWPFSASDSPLSNAHNSTKYTDFKTSWPPEPIGHKSWKANRG
ASQSQLSRPPPGLASQKQPSPTPWSGGAPRFVGRGWSSGSGTSGTTWSDGGPRESCWLVL
SNLTPQIDGSTLRTICMQHGPLLTFHLGLTQGTALIRYSSKQEAAKAQSALHMCVLGNTT
ILAEFVSEEDVARYIAHSQAGGAGSGGTQPGSTVSGPAAAPALGSNGSVGDRGTGGSAGA
VGVEAASTVGAGPNNSGWDGSLDSTGSSSDQTAPHGPGLGIFAHWSSNGATSGAGGVEAG
RQALWGGMGGMGGAGYHNNNLWGSPAMEDRHQMGSPASLLPGDLLGGGADSI
NT seq
6099 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaggaaaaaagacgaaaaaaggaaaagggaagcgtctcagaaggtt
atagaacaaaaaaacaaagtgccagacctgaccaagcccacgtctgttcagtctcctgcc
acccagagcagctctgcctcgcctagccctggacccaccccctctgcttcaccttcaccg
ggcacctcgggctctggtagtgctgccccctcacagggtggcaataatgccaaacgccta
ctggtggccaacggacagcccacctccatctccagttcttcctccaccacaggtggcccc
agtgccacaggaaacggcacctcaagtagcggaggtggtgcccaaacgcctcagcaacaa
ccacgctacatgccgagagaagtgccaccgcgattccgctgccagcaggaccataaagtg
ctactgaagaggggtcagccgccactgtcctctatgctgctgggaggtggtggaggggat
agccctaatgcaaacttggctgtttcagaatctggtgcagctgcctccacattagctctc
acctcatcatcagttgctgcttctactactactacttctaattatgcaaattccatgtgg
ggggtgagctcaggcagccaggcctcctctcagggcagggagaaggtcattgttgatggg
aacgatctggaggagtggcctagcatcgctggcagtgaaggaggcggtagcggcggcagc
aacaacaacaacaacgggatgtctgtgaacagcactagtgcctctggcaatcagccctca
cccacttcctctctctctttgcccaatgaatgtatgcagtcgcccagtggtgtggcatgg
ggcacggctgcctcccagggtcatcttggaggagggagcgcagttgctatgtctggtccc
tcctctctttccaaagcttccactgtgccagggagccacgacgccagtggccccatggag
ggcaatagtggaattccaggtgccaatttaaatccaaatgccaacccttcagcctggcct
gccctggtgcagcaggacgagtctgctgcttcaggagaaggaggtccgtcttccttccaa
caccagggccctggcggccccttgtctgccaacaacacttctttgggccttgggatgctg
gggggtcagtcacctttatctgtgaatcaatcaagcgcccatcagcatcaacttcaccaa
atgcaatctagagacggaaagtgggatagtgaatcagtgggaccaaatacaacaggaggg
gaaggacctggaggtgtcgtggaccgcagtggcataggaggagaccacagccttgtttct
tcttggagaggccaaccttcttttcctgcatctaactctaaaatgggtgcctccagaact
gatggctgggacactggtggtggcacaggggtgttcgcagctgctgaaggggataatgga
acctcaggttggggttacccgggttcgactagtggggttaatgcctgggggaatgttggg
ggaaacacgaatcagacctctggggtatctcagggagggtgggggtcagacagaggagcg
cccaataatgactggggaggtggagggggagaggtgaaaggtgaatctgccagtagcaac
agtggagtctgtaccactggtatcccacccacctctgcttcctcatctctgtctacaaat
atgagcagagcttgggacaatcagaagggagaaggtgaatcaggggagtgggtgggggga
caggatgcacaggggggttcttcatccagtggtggaaactccagagccgggagtgggcct
aacagcggcaatggtcgttctcgccgcccgccaccaaatgctgacgctgccttacaaacc
cttctcaaccgttcggatttggatcctagggttctgtcaaacacaggctggggacaaacg
caaatcagacaaaacacaacctgggatgttgaaaatcttggacaaaataagcttggatca
aagcccacctcttctggtggtgggtcttctcagtttcctgcacccaggtcgaccatcagt
gaatctatggcttcatctgctggttccactggagagggctgggagagcagcagcaacagt
agcagtagtggagcctctatctctgggagaggcccacccacatcaggccccaacacaaga
aatgtcaacatgccacaatctgggccagtgtcatctacagggcctgttataggttccggg
gccctgtcaggaccaacacaacagggaacggctacaggctggggcagaacagggacaggg
gagagccaagaagccaaagggtggggaaatgaagagtggagagatgccagaccaggaaat
ggaggtggatggggtaatcctggtcaacaaggtgagccacaggggggtggctggggagaa
ggtcaggaggaaaaagggaccggtgggtggaaagaactgggaggggatgcacgtggcagt
gggtggggatccgggcaaaaggtgaggacaggtagagactggggtgagcaagagcgcaaa
tcaaatggaggtggatgggaggacgagaggaaaaatgggccaggaaactcaggtggggat
tcgggtgggggtggctggggaagttgggatgaaaatggccccagaagaaactggggggcg
ggtggtacagggggtgggggtagtgctgggggtggaatgggggttattggttcaaaatct
catcaaggttggagtggaggaaacaaaatgcatcaaatgccaaacagccagtcgggccca
gtgacaggcccacaggcacaactgcaacagcaacaatcacagccccgcaatcagcaccca
cagcaagcattggaccaaggtgttatgcaaggggccatggggcgcaaacccatgcctcca
gcccagaaccaaagctcaggctggacctcaggtcccattccttctggttcagtaggaagt
ggtcctgaacccagtggttgggaagaaccatcaccgcagtccatcagcagaaagagtgac
tttgacgatgggacatcagcttggggagacccaactaattacaattttaagccggtcaac
ctgtgggacaagaacaatcctaatcctaatggctcacagtctcaaagtcagggtcagact
ccccatcaaccacaaggaccaacaggccagccgccgccaaatagacagcccccagcactt
gggggaaacttcagcactgcccatggtccaggaaaagcacctgctctaggtccttcaggt
tggggaggtacttctcctcctagcccatcagtcgacaagggcacggcagcttggggaaag
cctactgatgctcccactggttggggggatccagaagatgtaggtgggaagtcccaccct
gtcgggtggggcagttcctctcctaatcctatgaaatctgggtcaaagtctatgcaagat
ggctggggagacaaagagggatctgtggcagcgtcacgtcactcaagttgggaggaggaa
gaggaaggaggcggcatgtggaacagtgccggctcccaggggagtggatcctcttggggt
caaggaagtaatggaggctggggacagagccacagcgggaagaagcccaataacaagggt
ccattgaagtctggagactcgtggatgggccccctcaatagacagttttcaaatatggga
cttatgaatgatgatcctggtggttcatctatggatttggccaccaattccctgcaagac
aaaaaaatggatgcagagaaaagaggcatgagtatgaatgattacaatggagacatgaga
aaagtaggacgaggaggagtaggaatgggctacagatcgtctggtgccaaagatgcacct
ggagatgctggatcattctatgataagaccatgcctttgaccaatcaagatgggttccta
ggggatgagggttctctgaatacatcacccattttctacaagccccattccctcttcaac
cacacattacctcttagacaaggtagtcatggtatctttggcaatgttggcgggatgccc
caatcaaggcaccaaccaagtgtcccacccatgaaccagtccccagggattcgagcacaa
gtgcctcatcagttcgtgtcacctcaggtgccaggccctgtgctgaagcagatgccccct
cccagcgggagcgtggggggtgttggtgctgtgggaggagtggcaggagttgggggaggt
gtgttccctccacaactgtccccacagcatatcgccatgcttggcagcatttaccctcct
cacatccagtttcagctggcctgtcagctcctcctccagcaaccacagcaacagcaacaa
caacagcagcagcaacagcagcttctgcagaaccagagaaaattcacacccaatgtgcga
cagcaggctgatccacagcagctcgccaggataatggccgtgctccagcagcaaagacag
cagcagcaggtagggggactaggaggaagctccaaactgtctccctcacacctcactgca
ggtggagtgggccataaaatcccaatggatcccctgtcccactcaggactgtctggatct
gtagctgacctgcaacagaaaacacatgggccctactctggttttggttctgggatgaac
ctctcaggttttgacctgggcagctctgttataggggggccaggccctatgaaggacttt
ggggctcagcaatcacgcttcaaatggatgatggaaggccagtcatcaccagattcttct
catgctgagaacgcattccacaaaaatggtcctgtcactcccatgaaaatgccagggggc
tcgccctactcaccgtatgacatgatggttggagacgggctcggtgataactggcatcgc
acacctgggaacaaaatgggggccaaggctactactgcacccagctggcctccagagttc
cagcctggtgtgccttggaagggtattgaccgtgttgaccctgatacagatccttacata
acgccagcgatgatgggaaatgcagtgtctcctggcctcaatgacaacgagcaccagtta
ttagacaatactgattccactcctcctctcaacaccttgctgccttcacctggtgcctgg
cctttcagtgcctcagacagccctctctccaatgcacacaactctacaaagtacactgac
ttcaagactagctggcctccagaacccatcggacacaaatcgtggaaagctaatcgaggg
gctagccagagccagctgtcccgtcctcctccagggctggccagtcagaagcagccttct
cctacgccatggtccggtggtgccccacgatttgtaggcaggggctggagcagtggttcg
ggcacatctggcacaacatggagcgatggaggccctcgggaaagttgttggttggtgctg
agcaatctcacccctcagattgatggctcaaccctgaggaccatctgcatgcagcatggc
cctctgttgacctttcaccttggcctgacccagggaacagccctcatacgttacagctct
aaacaagaagcagccaaagcccagagtgcacttcacatgtgtgttttaggaaatacgacc
atcttggcagagtttgtgagcgaggaggatgtggctcgttatatcgcacattcccaggct
ggaggagcaggaagtgggggcactcagcctggttctactgtctctgggcctgcagctgcc
cctgcactggggtctaatggtagtgtgggagatagaggaacagggggcagtgcgggggca
gtgggggtagaagccgcttccacagtaggagctgggcccaacaactcgggatgggacggg
agtctggacagcacaggtagctcatcagaccagaccgccccccatgggcccgggctgggc
atcttcgcccactggagcagcaacggggcaacgtcaggtgctggaggagtggaggcagga
aggcaggctctgtgggggggcatgggtggcatgggtggagcaggttaccacaacaacaac
ctctggggctctcctgcaatggaggatcgtcatcagatgggcagccccgcctcactgctg
ccaggggacctgctgggtggaggagctgactccatttga
DBGET
integrated database retrieval system
