Eucyclogobius newberryi (tidewater goby): 140370185
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Entry
140370185 CDS
T10929
Symbol
shprh
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
eny Eucyclogobius newberryi (tidewater goby)
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eny04121
]
140370185 (shprh)
Enzymes [BR:
eny01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140370185 (shprh)
Ubiquitin system [BR:
eny04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140370185 (shprh)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
zf-C3HC4
PHD
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
GRP
Motif
Other DBs
NCBI-GeneID:
140370185
NCBI-ProteinID:
XP_072313319
LinkDB
All DBs
Position
Unknown
AA seq
1677 aa
AA seq
DB search
MSSKRKRAPPVKVDDEAKKRLEWNMLEDRKNEVILGDELDQMPTCSGFVQPTPAREDEAA
ARESATESASASADTPAALAAPSVTVRPLAALGPAWKALIGEFAVQPKWLPTDFERRTFS
LWRKERGFSLRYRRRADPEEDSGGQSGVDGEDEEDTSHGAECGLSRVSLGDLDWLLQRRV
VQLCHQTTEDGYKVGIYLLEAGLGKPEFLSEGTTRLKKANQILQKIMEHFYDFIVPEVVD
NDDEACDTELERQNIEELYDYVRRVHQRGGGATGGGGATGGGGATGGGGATGEGEGGLSF
EVQHKALVPVLRPYQRQAVNWMLTRETARNASPPKEQGLHHLWHEVATLCGKKLFYNPYT
GCLIREFPLAGVDWPGGILADEMGLGKTVEVLALILCNPRQNLQQEAYTLPEGQSVNYFV
PPPPEQKKKKAPKSEVVPPKARVNFPPVRSMLLTAMAEADKGKGVSLPSIVSYMRVSYGY
DPAKNRNHIKRTMKKLLGEKKVKQVKGRGMMGSFKLAGNFSGTQEKLLLSPPKLPKTPES
SPRKSFQRRAKDKAEVALQSALTEDDDDPEASPSAAPTEAYEERFAETLDDSNDAPNVST
SCSRATPDRSESEPKDEPDREQKETVAIAQNVQEEETEMPKRESLFPFNASNYRFECICG
ELGVVDYKPRVQCMNCDLWQHAACVNYKEESLGTTPFFCPHCLVAMTPVPTGATLIISPS
SICHQWVEEISKHIRSSSLRVLVYQGVKRHGFLQPQMLAEQDVVMTTYDVLRSELNYVDL
PHSNSEDGRRFRSQKRYMAVPSPLVAVEWWRICLDEAQMVECVTAKAAEMALRLASVNRW
CVSGTPVQRGLEDLYGLVLFLRLDPFWVKRWWEQLLYRPYRRGDTAPLYRVISQVLWRSA
KKDVIDQIQIPAQKEEVHWLRFSPVEGHFYHRQHEVCSQDALLRLRKISDWSLKLGALDR
RTVHTILGPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLKSLQKKCRSECEEAHRQLV
CALNGLAGIHIIRGEFADGAEMYREVLRSSEEHKGKLKTDSLQRLHATHNLMELLSAKHP
GIPPTLRDDKLSEEGEQLRQHYMTKYDSEVNDALSALRPVLQNIKELKRKVKLNSPWWLE
VVQKAVRSSCEEELVTRVKNELTTNYKQPVNKLSMADKFRDASGLQFILTTKLQELLKSQ
KTVQDAVKRLEGPASREVIDEATLCHLRPNRLPLNNCVFCKADELFNDYESKLFSHTVKG
QTAIFEEMIEEEEGLVDERLPTTSRGLWAASETERSLKAILAFAKSRRLDPELAEEGSTF
MELFENWKKEYKVLHEYWGVLRNHVSAIDELGMATERLRVRLPDEPKPKLLHIIEPHEVE
QNRVKLLNDQAVAKSQLQKKLGQQLYLNNLEKSQDKSTGGLNPEPCPICARPLGQEWAVL
TCGHCFCNECIAIMVEQYSVGARNRAIKCAICRQPTSHAEISYVFTAQASCHDQEIPVKG
SHSTKVEAVVRSLKKIQISDAGAKCLVFSTWQSVLDIIAKALLDNNMEFTQINGNHKFQE
NLSAFKHDAQINILLLPLHTGSNGLNIIEATHVLLVEPILNPAIELQAIGRVHRIGQTKA
TFVHRFLIKSTIEERMQTMMKTAEKSHSGASMKHSEAAVLTVADLADLFTEGGGRLE
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaaacggaagcgcgcgccgccggtgaaggtggacgacgaggccaagaagcgg
ctggagtggaacatgctcgaggaccgaaagaacgaggtcattttgggcgacgagctggac
cagatgccgacctgctccggcttcgtccagccgactccagcccgcgaagacgaagccgcc
gctcgtgaaagcgccacggagtcggcgagcgcgtccgcggacactcccgccgctctcgcc
gctccctcggtcacggtgagaccactggctgcgctcggcccggcgtggaaagctctgatc
ggggagttcgccgttcagcccaagtggctcccgacagactttgagcggaggacgttctcg
ctctggaggaaagagcgtgggttcagtttgaggtacaggagacgtgccgaccctgaggag
gactcgggcggtcagagcggagtggacggggaggacgaggaggacacgtcgcacggagcc
gagtgcggtctgagcagggtttctctgggagatctggactggcttctgcagaggagagtg
gtccagctctgccaccaaacgacagaagacggctacaaggtgggcatctacctgctggag
gccgggctcgggaagcctgagtttctgagcgaaggcacgacccgtctgaagaaggccaac
cagatcctgcagaagatcatggaacacttctacgatttcattgtacccgaagtggtggat
aacgacgacgaggcgtgcgacacggagctggagcggcagaacatcgaggagctgtacgac
tacgtccggcgcgtccaccagcgaggaggcggagcaacaggaggaggcggagcaacagga
ggaggaggagcaacaggagggggaggagcaacaggagaaggagagggcgggctgagcttc
gaggtccagcacaaggccctggtccccgtgctccggccgtaccagcgtcaggccgttaac
tggatgctaacgagggagacggccaggaacgcgtcgcccccaaaagagcaaggtttgcat
cacctttggcacgaggtggcgactttgtgtggaaagaagctgttttacaacccgtacacc
ggctgtctgatccgcgagttccctctggccggcgtggactggcccggggggattctggcc
gacgagatggggctcggcaaaactgtggaggtcttagcactcatcctgtgcaacccccga
cagaacctacagcaggaggcctacaccctgcccgaggggcagtcggtgaactactttgtt
cctcctccaccggaacagaagaagaagaaagcgccaaagtcagaggtcgtgccgccaaaa
gcaagagtgaacttcccaccggtgcgctcgatgctgctcacggcgatggcggaggcggac
aaaggcaagggcgtgtctcttccctccatcgtgtcgtacatgcgcgtctcctacggttac
gacccggccaagaaccgcaaccacatcaagaggaccatgaagaagctgctgggcgagaag
aaggtcaagcaggtcaaaggtcgcggcatgatgggctccttcaagctcgcgggcaacttc
tccggaacgcaagagaagctgctgctgtcgccaccaaagcttccgaaaacccccgagagc
tcgccgcggaagtccttccagagacgggcgaaggacaaagccgaggtggctctgcaaagc
gccctgacggaggacgacgacgatccggaggcgtcgccgtccgccgccccgaccgaagcg
tacgaggagcgcttcgccgagactttggacgactcaaacgacgcgcccaatgtctcgaca
tcgtgctcccgagcgacgcccgaccgaagcgagtccgaaccgaaagacgaacccgatcgc
gaacaaaaagagacggtggcaatcgctcaaaacgttcaagaagaggagacggagatgccc
aagcgcgagtcgctcttcccgttcaacgcgtccaattaccgcttcgagtgcatctgcggc
gagctgggcgtggtcgactacaagccgcgggtgcagtgcatgaactgtgacctctggcag
cacgccgcctgcgtcaactacaaggaggagagtctggggaccacgccgttcttctgcccg
cactgcctggtcgccatgacgcccgtgcccaccggcgccacgctcatcatctcgcccagc
tccatctgccaccagtgggtggaggagatcagcaagcacatccgctcgtcctcgctccgg
gtcctggtgtaccagggcgtgaagcgccacggcttcctgcagcctcagatgttggcggag
caggacgtcgtcatgaccacgtacgacgtgctgcgctccgagctgaactacgtggacctg
ccccacagtaacagcgaggacggacgccgcttcaggagccagaagcgctacatggccgtg
cccagccccctggtggctgtcgagtggtggcgcatctgcctggacgaggcgcagatggtg
gagtgcgtcacggccaaagccgccgaaatggctctgcgcttggcttctgtgaaccgatgg
tgcgtcagtggcactccagtccagagaggcttagaagatctgtacgggctggtgctgttc
ctcagactcgacccgttctgggtgaagcgctggtgggagcagctgctgtaccgcccctat
cgccgtggtgacaccgcccctctgtaccgcgtgatcagccaggtcctgtggaggtcagcc
aagaaggacgtcatagaccagatccagatccccgcgcagaaggaggaggtgcactggctg
cgcttctctccggtcgagggccacttctaccatcggcagcacgaggtctgctcccaggat
gcactgctgcgcctccggaagatctcggactggagcctgaagctgggcgcgctggaccga
cgcacggttcacaccatcctggggcccctgctgcggctccgacaggcctgctgccacccg
caggccgtgaggggggagttcctgcccctgcagaagagcacgatgacgatggaggagctg
ctcaagtccctgcagaagaaatgccgctccgaatgcgaggaggcccacagacaattggtg
tgcgccctcaacggcctggcagggatccacatcatcagaggcgagtttgcggatggcgcg
gagatgtaccgagaagtgctgcgctcgtccgaggagcacaaagggaaactgaaaaccgat
tctctgcagagacttcatgccacgcacaatctgatggagctgctgagcgccaaacaccct
gggatcccgcccactctgagggacgacaaactcagcgaagagggcgagcagctccggcag
cactacatgaccaagtacgactcggaggtgaacgacgccctcagcgctctgcggcccgtc
ctgcaaaacatcaaggaactcaaacgcaaagtgaagctcaactccccctggtggttggag
gtggtgcagaaagccgtccgcagcagctgtgaagaggagctggtgacgcgggtcaagaac
gagctgaccaccaactacaaacagccggtcaacaagctctccatggccgacaagttccga
gacgccagcggactgcagttcatcctcaccacgaagctccaggagttgctgaaatcccag
aagacggtgcaggacgcggtgaagcggctggaggggccggcctcgcgggaggtcatcgac
gaagccacgctctgccacctccggcccaacaggctgccgctcaacaattgtgttttttgc
aaagctgatgaacttttcaacgattatgagtccaagctgttttcccacacggtcaaaggt
cagacggccattttcgaggagatgatcgaggaggaggaggggctggtggacgagcggctg
cccaccacgagccgaggcctgtgggccgcgagcgagaccgagcgctccctcaaagccata
ctcgccttcgccaagtccagacgcctcgaccctgagctggcggaggagggcagcaccttc
atggagctctttgagaactggaagaaggagtataaggtgcttcacgagtactggggcgtg
ctgaggaaccacgtgtcggcgatcgacgagctgggcatggccacggagcgactgagggtg
cggctgcccgacgagcccaagcccaagctcctgcacatcatcgagccgcacgaggtggag
cagaaccgcgtgaagctgctgaacgatcaggccgtggccaagtcgcagctgcagaagaaa
ctggggcagcagctttacctcaacaacctggagaagtcccaggacaagtcgacggggggc
ctcaacccggagccatgcccgatctgcgcccggccgctcggacaagagtgggccgtcctc
acctgcggacactgcttctgcaacgagtgcatcgccatcatggtcgagcagtacagcgtc
ggcgccagaaacagggccatcaagtgtgccatctgccgccagcccaccagccacgccgag
atctcctacgtgttcaccgcccaggccagctgccacgaccaggaaataccggtcaagggg
agtcactccaccaaagtggaggccgtggtccgatcgctcaagaagattcagatcagcgac
gcgggcgccaaatgcctcgtcttctccacatggcagagcgtcctggacatcatcgccaag
gccctgctcgacaacaacatggagttcacacagatcaacggaaatcacaagtttcaggag
aatctgagcgcgttcaaacacgacgctcagatcaacatcctgctcctgccgcttcacacc
ggctcaaacgggctcaacatcatcgaggccacgcacgtcctcctggtggagcccatcctc
aacccggccatcgagctgcaggccatcgggcgcgtgcaccgcatcgggcagaccaaagcc
acgttcgtccacagattcctgatcaaatccaccatcgaggagcggatgcagaccatgatg
aaaacggcggagaaaagccacagcggcgcgtccatgaagcactcggaggcggcggtcctg
acggtggcggacctggcggacctgttcaccgagggcggcgggcgtctggagtga
DBGET
integrated database retrieval system
