Eucyclogobius newberryi (tidewater goby): 140372975
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Entry
140372975 CDS
T10929
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny04137
Mitophagy - animal
eny04140
Autophagy - animal
eny04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
140372975 (hif1al)
04137 Mitophagy - animal
140372975 (hif1al)
04148 Efferocytosis
140372975 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eny03000
]
140372975 (hif1al)
Transcription factors [BR:
eny03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
140372975 (hif1al)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
HIF-1
PAS_4
PAS_9
PAS_2
Motif
Other DBs
NCBI-GeneID:
140372975
NCBI-ProteinID:
XP_072315942
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MERPGAPAAAKRSRSEQRKLRSRDAARCRRSQETEVLYELALALPLPRRVSTHLDKAAIM
RVALSYLRLRHLLTLSENYRAPGQDSQDDTMDQFYPQVLGGFIVVLNEEGDIIYLSENVS
VHVGITQLELLGQNLFDFVHPCDQEELRDLFTVGSGVSRKASIKQLLERSLFLRMKNTLT
SRGRTVNLKSATWKVLHCTGHMHTQGGRRVLSLLCEPLPHPSSVEFPLDSSTLLTRHSMD
LCFTHCEGRVLELLGYESHGLIGCSAFHYIHALDLDHIHSSLQTLLSKGQVRTRQYRFLS
NHGGFVWVETQATVLHSRSGQPEAIVCLNFILSAVQQAHVVFSVEQRRSGDCRGEPPCQA
PQARAELTAEPPGESCSPSPALGPSPALGPSPALCPDLIKLSFASPKPDSEPKDPQDLCS
PALRQLLFPIFNSPPSSCSPAPLPRPQTVPSQEEPMDTSGVERFFAMGPDADKGQGQTLQ
HMDDMDLDMLAPYISMDDDFQLSALSAPEETETRGPSPLVIRSRKRGLCIDELQSHTRHK
GVAAEEELQSHKRHKGVAAEEELQSHKRHKGVAAEEELQSHKRHKGVAAEEELQSHKRHK
GVAAEEELLQSLALLGCLEECHLSGRGWNQLLTDKDPVLGGVQSERSALMTEIFLSRTPC
LSPPLSPPLSPPLSPPLSPPLSPMT
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggagaggcccggggcccctgcggccgctaaacggagccgctcagagcagaggaagctg
cgctctcgtgatgcagctcgctgtaggcggagccaggagacggaggtgttgtacgagctg
gctcttgctctgcctctgcctcgccgcgtctccacacacctggacaaggcggccatcatg
agggtcgccctgagctacctgcgactgcgccaccttctgacgctcagcgagaactacaga
gcaccaggacaggacagccaggacgacaccatggaccagttctacccacaggttctgggg
ggcttcatcgtggtcctaaatgaggaaggagacatcatctatttgagtgagaacgtgagc
gtccatgtcgggatcactcagctggagcttctgggccagaatctgtttgactttgtccat
ccttgtgaccaggaggagctgagagacctcttcaccgttggctctggtgttagccggaaa
gcaagcatcaagcagctcctagagaggagcttattcctgcgcatgaagaacacgctgacc
agcagagggcgcacagtcaacctcaagtctgccacttggaaggtcctgcactgcactgga
cacatgcatacacaagggggcaggagagtcctgagcctgctctgtgagcccctccctcac
ccctccagtgtggagttccccctggactcatccactctcctgaccagacacagcatggac
ctgtgcttcacccactgtgaaggccgagttctggagttgctgggatacgagtcacatggt
ctgattggctgctctgcattccactacatccatgcgcttgaccttgaccacatccacagc
agcctgcaaacattgctgtccaaaggccaggtccggactaggcagtatcgctttctgtcc
aatcacggagggtttgtttgggtggagacccaggccacagtgctgcacagccggagcggt
cagcccgaggccattgtctgcctcaacttcatcctcagtgctgtccagcaggcccacgtg
gtcttctcagtggagcagaggcggagtggagactgtagaggagaacccccatgtcaggcc
ccccaagccagagcagagctcactgcagagccaccaggagagtcctgcagccccagcccc
gccctgggccccagccccgccctgggccccagccccgccctgtgcccagacctcatcaaa
ttgtcctttgccagtccaaaaccggactcggagcccaaagacccccaggacctgtgcagc
cccgccctgaggcagctcctgttccctatcttcaacagccccccctcgtcctgctcgccc
gccccattgcctagaccccaaacggtcccgagccaagaggagcccatggacacaagcgga
gtggagcgcttctttgccatggggcccgatgcagataagggccagggtcaaactctacag
cacatggatgatatggacctggacatgctggctccgtacatctccatggacgatgacttc
cagctcagcgctctaagtgccccagaggagacagagactcggggcccttctccgctggtc
attagaagcaggaaaaggggcctctgcattgacgagctgcagtcacacacaaggcacaaa
ggcgtggcagcggaggaggagctacagtcacacaaaaggcacaaaggcgtggcagcggag
gaggagctacagtcacacaaaaggcacaaaggcgtggcagcggaggaggaactacagtca
cacaaaaggcacaaaggcgtggcagcggaggaggaactacagtcacacaaaaggcacaaa
ggcgtggcagcggaggaggagctgctgcagagcctggctttactgggctgcctggaggag
tgtcacctgtcagggcgtggctggaaccagctgctcacagacaaagacccagttctgggc
ggagtccagagtgagcgctcagcactgatgacggagatctttctcagtcgcactccttgc
ctgtcaccgcccctgtcaccgcccctgtcaccgcccctgtcaccgcccctgtcgccgccc
ctgtcgcccatgacctga
DBGET
integrated database retrieval system
