Eucyclogobius newberryi (tidewater goby): 140373821
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Entry
140373821 CDS
T10929
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
eny Eucyclogobius newberryi (tidewater goby)
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eny03016
]
140373821 (cdkal1)
Enzymes [BR:
eny01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
140373821 (cdkal1)
Transfer RNA biogenesis [BR:
eny03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
140373821 (cdkal1)
Prokaryotic type
Methylthiotransferases
140373821 (cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
140373821
NCBI-ProteinID:
XP_072316599
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MPSACESLIDDIEDMVSSNDPTPQERQSARKSIIPRSRKKREPLNNEELQTDSLIPGTQK
IWMKTWGCSHNNSDGEYMAGQLAASGYKMTDDPASADLWVLNSCTVKNPAEDHFRNSIKK
AQEQQKKVVVAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDG
GRRLGGARLDLPKIRKNPLIEIISVNTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCEIWLTSEDTGAYGRDISTDLPTLLWRLVEEIPEGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHVPVQSASDSVLMDMKREYCADDFRKVVDFLKERVPGVTIATDIICG
FPGEREEDFQETVELVKHYKFPSLFINQFYPRPGTPAAKMEQVPAHVKKQRTKELSQLFH
SYNPYDHKVGERQHALVTEESFDAQFYVAHNKYYEQVLVPKRSQFKGKMIEVDIYEAGKH
FMKGRPVEDSKPFTPSIAKPLQKGQVSGLSQEQMANGVHGPAAMSSSSSAAVSVSLFGCY
SVDRDALRKLGIGLALAAAILAFIVEKLY
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgccctcagcctgtgagtctttgattgatgacattgaggacatggtttcttctaatgac
ccaacacctcaggagaggcagtcggcccgtaagagcatcataccaaggtccagaaagaaa
agggagccactgaacaatgaagagcttcaaactgacagtttaattcctggcactcaaaag
atatggatgaaaacttggggctgcagccacaacaattcagatggagagtacatggctgga
cagctagccgccagtggatacaaaatgacagatgacccggcaagcgcagacttgtgggtg
ctcaacagttgtacagtgaaaaacccagcagaggatcacttcaggaactccatcaaaaag
gcccaagaacaacagaagaaggtggtggtggcaggttgtgtaccccaagctcagccaaga
atggactacctcaagggactcagcattataggggtccagcagattgatcgagtggtggaa
gtcgtagacgaggctgttaaaggacattcagttcgtttgctgggccagaaaaaagatggc
ggacgaagacttggaggagccagactagacctgcccaagatccggaaaaaccctctcatt
gaaataatctccgtcaatacaggatgtctgaatgcttgcacctactgtaagacgaaacat
gccagaggagacctagccagctaccccatagaggagctggtagagcgggcaaggcagtca
tttcaggagggcgtgtgtgagatttggctgaccagtgaagacacgggggcatacggcagg
gacattagcacagatttgcccactctgctctggagactggtggaggaaatccccgaagga
gccatgctgcgtcttggcatgaccaaccctccgtacatactggaacacttagaggaaatg
gcgaagatcctgaatcatcctcgtgtgtatgcgttcctccatgttcctgtgcagtcggcc
tcagacagtgttctgatggacatgaagagggagtactgcgccgacgacttccggaaagtg
gtggacttcctcaaagaaagagttccaggtgtaaccattgccactgatatcatctgtgga
ttccctggagagagggaggaggactttcaggaaaccgtggagctggtgaagcactacaag
ttccccagcctcttcatcaaccagttctaccctcgacctgggacgcctgccgctaaaatg
gagcaagtgcctgcacatgtgaaaaaacagcggacgaaagagctatcacaactgttccac
tcatacaacccttatgaccacaaggttggcgagaggcaacacgcgctggtgactgaggag
tcattcgatgcccagttctatgtggcgcacaacaaatactacgagcaggtgctggtgccc
aaaaggtcacagttcaaagggaagatgattgaggtggacatttatgaagcaggaaaacac
tttatgaaaggccgtccggtcgaggacagcaaacctttcactccatccatcgccaagcca
cttcagaagggacaagtttctggtctctcacaggaacagatggccaatggcgtccacggt
cccgctgctatgtcttcttcctcctctgctgctgtgtccgtctcgctgtttggctgttac
agtgttgatcgggacgcgctgaggaagctgggaattggccttgcgctggcagccgccatt
ttggccttcattgtggagaaactgtactga
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