KEGG   Eucyclogobius newberryi (tidewater goby): 140373900
Entry
140373900         CDS       T10929                                 
Symbol
seh1l
Name
(RefSeq) nucleoporin SEH1 isoform X1
  KO
K14299  nucleoporin SEH1
Organism
eny  Eucyclogobius newberryi (tidewater goby)
Pathway
eny03013  Nucleocytoplasmic transport
eny04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:eny00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    140373900 (seh1l)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    140373900 (seh1l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eny03019]
    140373900 (seh1l)
   04131 Membrane trafficking [BR:eny04131]
    140373900 (seh1l)
Messenger RNA biogenesis [BR:eny03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     140373900 (seh1l)
Membrane trafficking [BR:eny04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    140373900 (seh1l)
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 WDR90_beta-prop_4th EIF3I WDR55 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 140373900
NCBI-ProteinID: XP_072316730
LinkDB
Position
Unknown
AA seq 414 aa
MFVAKTIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKSENGEWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGQSHWIKRTTLVDSRTSVTDVK
FAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRTHPP
MFAVGSDDSNVSYGGKVQIYEYNENTRKYGKAETLMTVTDAVHDIAFAPNLGRSFHVLAI
ATKDVRIFKLVPLRKESTSSGPTKFEVQIVAQFDNHNSQVWRVSWNITSTLLASSGDDGC
VRLWKANYMDNWKCTGILKGDGSSLTGSSGQPTAMSTVMSSSLQSQSVINGMSAGRYFFP
ALDPPRVGSRYGQLLPPPSLIENCEAEPIHPQPQPHIYRHPSRALLPLPEAEGL
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgtttgtcgcaaagaccattgcagcggaccacaaggacttaattcatgatgtttcttac
gacttccacggccggaggatggcgacgtgctccagtgaccaaagtgtgaaggtgtgggat
aaaagtgagaatggagaatggcactgcacggccagctggaagacacacagtgggtccgtg
tggagagtgacgtgggctcatccagagtttggacaagttttggcttcatgctcctttgac
aggacagcagccgtgtgggaagagattgtcggagagtccaatgacaaacaaagaggacaa
agccactggataaagaggaccacattggtagacagtcgaacttcagtgacagatgtaaag
tttgctcctaaacacatgggtctgatgttgaccacctgctctgccgatggtgtggtgaga
atctatgaagcccccgatgtcatgaacctgagccagtggtccctacagcatgagatctcc
tgcaaactcagctgcagctgcatctcctggaacccctccagctcacgaacccatcctcca
atgtttgctgtggggagtgatgacagcaatgtatcgtatggtggaaaagttcaaatctac
gagtacaatgaaaatacaaggaaatatggcaaggcagaaactctaatgacagtcacagat
gctgttcatgatattgcttttgctccaaacttgggaaggtcttttcacgttcttgccatt
gcgaccaaagatgtcagaatatttaagctggtgccgttgaggaaagagagcacatcttca
ggaccaactaagtttgaggtacagattgtggctcagtttgataaccacaactcccaggtg
tggagggtaagctggaacattaccagtactttactggcttcctctggggacgatggatgt
gtgcgactatggaaagccaactacatggacaactggaagtgcacggggatcctcaaaggt
gatggcagttctctgaccggctcctctggtcagcctacagccatgagcactgtgatgagc
tcctctctccagtcccaaagtgtcatcaatggaatgtctgcaggaaggtatttctttcct
gctctggatcctcccagagttgggagcaggtatgggcagcttctgcctcctccttctctc
atagagaactgtgaagctgagcccatccatcctcaaccacagccacacatctacagacat
ccgtctagggctctgctgcctttaccagaggctgaaggactgtaa

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