Eucyclogobius newberryi (tidewater goby): 140374172
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Entry
140374172 CDS
T10929
Symbol
rorc
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
eny Eucyclogobius newberryi (tidewater goby)
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eny03000
]
140374172 (rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
eny03310
]
140374172 (rorc)
Transcription factors [BR:
eny03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
140374172 (rorc)
Nuclear receptors [BR:
eny03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
140374172 (rorc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
VPS13_M
Spt20_SEP
TFIIA
DUF6791
Motif
Other DBs
NCBI-GeneID:
140374172
NCBI-ProteinID:
XP_072317086
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MDYEGPLLPPADSLITRDAVLSKKTHLTQIEVIPCKICGDKSSGVHYGVITCEGCKGFFR
RSQLPTVSYSCSRQSNCLIDRASRNRCQHCRLQKCLAKGMSRDAVKFGRMSKSQRDSLIA
EVERHRRQQQQQQQQQQQQQQLQGQTQAALSFSSKPREEGSPQHIQPMASIYPFNGDYTA
DLHPYLMCSPSEPTMIFRGSQGSAHMDSRGFESRQSSYDLMTISPYSPLDNSYSPHPHSL
RSLDELCVTILRSHRETSQCRVEELNVLRWKLFSREEVQIYQSKSVDEMWQHCAIRLTDA
VQYVVEFAKHIPGFRILSQNDQIALLKAGSMEVVLVRMSRFFNTDNNTVYFDGKYAGTEV
FKSLACGDLILAVFEFAQSLCALKLTEQQLALFSALVLISADRPCLEDRARVQRVQRGIE
LGLTTILQRDNQESLMQKLNQRMARLRFLCSLHTEKLHWFSLRHPHTAHSLFPPLYRELF
ATDTEQQQQPNSL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggactatgaagggcccctcctgcctcccgccgacagcctcatcaccagagacgcagtt
ctgtccaagaagactcacctaacccagattgaagttatcccgtgtaagatctgtggagat
aagtcatcaggagttcattatggagtcatcacatgtgaaggctgtaagggtttcttccgg
aggagccaactgcccacggtgtcgtactcgtgctcccgtcagagtaactgcctcatcgac
cgcgccagtcgtaatcgttgccagcactgccgcctgcagaagtgcctggccaagggcatg
agccgagacgcggtgaagttcgggcgcatgtccaaaagtcagcgagattctctcatcgct
gaagtggagcgacaccgacgacagcagcagcagcagcagcagcagcagcagcagcagcag
cagctccagggccagactcaggccgctctgtcgttttcctccaaaccccgagaggagggc
tcgccacagcacatccagcccatggcctccatctatcccttcaacggagactacactgcc
gacttacacccttacctcatgtgctcccccagcgagcccaccatgatcttcagagggtcc
cagggcagcgcacacatggactccaggggttttgagtccagacagagctcgtacgacctc
atgaccatctccccttacagtccactggacaactcctacagcccccatcctcactctctg
aggagcctagacgagctgtgtgtgactattttgcgttcccaccgcgaaacaagccagtgc
cgagtggaggagttgaacgtgctgcgctggaagctgttcagccgagaggaggtccagatt
taccagagcaaatctgtggacgagatgtggcagcactgtgcgatccgactgaccgacgcg
gtgcagtacgtggtggagttcgccaaacacatcccaggtttccgtatcctcagccagaac
gaccagatcgcactcctgaaggctggctctatggaagtcgttctcgtgcgtatgagtcgt
ttctttaacacagacaacaacacggtctacttcgatgggaaatatgcaggcactgaggtc
ttcaagtctctggcttgcggtgacctgatcttggccgtgttcgagtttgctcagagtctg
tgcgcgctgaaactcactgagcagcagctcgccctcttcagcgcgttagtgctcatcagc
gcagatcgtccatgtttggaggacagagctcgagtgcagcgagtgcagagaggcatcgaa
ctgggtctgaccactattttacagcgagacaaccaggagagtttgatgcagaagttgaac
cagaggatggcgcggctgcgatttctctgcagccttcacacggagaagctgcactggttc
agtctgcgccacccgcacacggcgcactcgctgttcccgccgctgtaccgcgagctgttc
gccaccgacaccgagcagcagcagcagccaaactcgctctag
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