Eucyclogobius newberryi (tidewater goby): 140377347
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Entry
140377347 CDS
T10929
Symbol
fip1l1b
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140377347 (fip1l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eny03019
]
140377347 (fip1l1b)
Messenger RNA biogenesis [BR:
eny03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
140377347 (fip1l1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
140377347
NCBI-ProteinID:
XP_072318824
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MSAEEADKTSTADAGAGDEEEEWLYGDETEGKDEDEEAKLNAAVSAVPPAESPTDDVAEH
ATGNGVASEPSAENAAAGEDVDSDSDSDDDDDDVRVTIGDIKTGAPQYTSYGAPPVNLNI
KSTSSRPYGQVSAKLKGVDLDAPGNINGVPVLEVDVESFEEKPWRKPGADLSDYFNYGFN
EDTWKSYCEKQKRLRMGLEVSTVGSVTSKITVQQGRTGNDKDMSSLPIHTSKADFNAPVH
MYKSSGSQITSRISPTQWTCKPPQDISYFTKSSGTIDVIGGQTATISRVEGRRRHNLDGN
NIQVLSEHSTSEAEPTAAKLPTFFPPGPLPPNIPPPPFLPPPPNVSTAPPLIPPPRMPIT
VPPPGFPPPPTGPPPSMIPTLDGGHPGGYDGRSMPPYFPQGAYPPPMAGGVPPPWPPMMD
NSKPWDYYPRRDEKRDKERERPRERAHEREREREHSPSGMSYTRLDTTVSATEMQYTEYS
DEERYRYREYQERGYERHRERSSREKEERHRERRHREKEEGRHKSSRSSSSRRRHDSEEA
EGHRRHKHKKSKRSKEGKEAGEDMSADQENQEGME
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaggaagcggacaaaacaagcaccgcggacgccggcgccggagacgaagag
gaggaatggttgtacggagatgagactgagggcaaagatgaagatgaagaggccaagctg
aatgctgcagtcagtgctgttcctcctgctgaatctccaacagatgatgttgcagaacat
gcaacaggcaatggtgtggcatctgagcccagtgcagaaaatgcagctgcaggggaggat
gtagacagtgacagcgacagtgatgatgatgacgatgatgtccgcgtcaccattggagac
attaaaacgggagcaccacagtacacatcctatggagctccacctgtcaatctcaacatc
aaatccactagctccaggccatatggacaagtctcagcaaagctgaaaggagttgacttg
gatgctcctgggaatattaacggtgttcctgttttggaggttgacgtggagtcatttgaa
gagaaaccctggagaaagccaggagcggatctgtctgactactttaactacggcttcaat
gaagacacgtggaagtcttattgtgagaaacagaagagacttcgcatggggcttgaggtt
tccacagtcggctcagtgacaagtaaaattactgtacagcaaggccggactggtaatgat
aaagacatgtcaagtttgccaattcacacatccaaggcagacttcaatgctccagttcat
atgtacaagtcctctggcagccagatcaccagtaggatctctcccactcagtggacttgc
aagccgcctcaagacatttcctattttacaaaatcaagtggaactattgatgtgattggt
ggtcagacggctacgataagcagagtggagggaagacgcaggcacaatctagatggcaac
aatatacaggtactttctgaacactcgacgtctgaagctgagcccactgctgcgaagctg
cccactttcttccctccaggtcctcttcctccaaacattcccccacctccatttctccct
ccacctccaaatgtcagcacagcaccgcctctgattccccctcccagaatgcctatcaca
gttcctccacctggctttcctcccccaccgactggaccaccgccttccatgatacccact
ttagacggtgggcatcctggaggttatgatggacgctctatgcctccctatttcccacaa
ggtgcttatcctcctcctatggctggaggtgtgccacctccatggcctccaatgatggac
aattctaaaccttgggactattatcctcgtcgagatgaaaagagagacaaagaaagagaa
aggcccagggagagagcacatgagcgagagagagagcgggaacacagcccctcaggaatg
agctacaccaggttggatactactgtgtcagcaacagaaatgcaatacactgaatatagt
gatgaagagcgctatcgttaccgtgaataccaagagcgcggttacgagcggcaccgcgag
cggtcgagtcgagagaaggaggaaagacatagagagagacgacacagagagaaagaagaa
gggcgccacaagtcctcacgcagcagcagtagcagacggaggcacgacagcgaagaagcc
gaaggacacagacgacacaagcacaaaaagagcaagaggagcaaagaaggcaaggaggcc
ggagaggatatgagtgctgaccaggaaaaccaggagggaatggagtaa
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