Eucyclogobius newberryi (tidewater goby): 140377659
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Entry
140377659 CDS
T10929
Symbol
pdcd11
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
eny Eucyclogobius newberryi (tidewater goby)
Brite
Ribosome biogenesis [BR:
eny03009
]
Eukaryotic type
90S particles
Other 90S particles
140377659 (pdcd11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
140377659
NCBI-ProteinID:
XP_072319242
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All DBs
Position
Unknown
AA seq
1801 aa
AA seq
DB search
MASMEEDFPRGGTAKKPTESQIVVQRSEVDNLFQSSEQSETKKRKGGDKDDGKKIKNIKT
GKGQDDALKLNAAGNLVEILHIKNLKEGMLFLGCVKEVTDFEMTVSLTCGLKGFLSIKNI
SDSYTKLLTEHLNSDEALTEDFLSLPHLFIPGMVIRCVIAKIDLTKEGSLSIQLSVNPKM
VNKLLASSSVKTGMVLSGFVESVEDHGYIIDIGVSGSKAFLPKNAVKDKHNNPEELNVGQ
YVTSLVEKVKNEGRVVQLSIIPKTITQAFAEADQGWTLTNILPGLLVKATINKVTKHGLF
VKFLSNFSGQVDFLHMEPEKASHYKEGDEVRACVLYVDPSTRLVGLSLHSYLLPGARVHT
AHPSGIQIGQVVENCKMTVLHHASGGVLELPNKTQAFVHKNHMKEQSATANENRTLAKTE
HTCRILDFCLIDQIYFASLRESVIKKPFFRYHDIHPGQIVEGTVSVLFEHGMIVHLSDHI
KGLVPRTHLSDIVLRNPEKKYTGGMKVKCRVLSVDAENRKLSLTRKKALIESSLPLFLSY
SDARPGRVSHGYIVCVKNFGCIVRFFNNVKGLVPLNELSCESIVSPEEVFYVGQVVKIKV
LHCDVENEKLVLSFKAAVEGNVEEPLKSDFECDVGKKVDARVLKKLVRGFEVAILPDEIP
AVLPTMHLTDHLSNGPLLWESLQEGDTISNLVCFYKNKQNITLTKKPTIKWALEEGILAK
DFSEITVGLQLFGWIKNIMAYGVFVEFPYGLVGLSPKSAMTEKFIPDATTPFELGQTVIA
KVTNIDEEKRRFLVTLKMSEVISPVGDQLTRLTNGLQERRAVTEMLSLKENCDLQHQLSN
LTIGQKVKLTVDSVVDTHATFKSDGLISATIMATKNHFIGLNLSPGQKVTAVVLFVDILS
AHVHVSILPRLLSKKKSLTEGAKYASTVQFVEKDFAVISLGDTAQLAIIQTRSHLNEVVL
HDAERLKPGMTFYVEVIDRTCEALQGLPLVSWERNPDKRQRTISETQTATKGNCFGDIVR
GTVRSVKPTCIQITLENGILGSVHVSEVLELDQIGRGSFPTSTIKVGSKVTARVIGGREI
TSHRFLPFSHPKFKFNCPELTLIPNKLEASDFKPVIAKEKLGSYSVGEEITCFVSKFHPD
KKSLEITTDPNITGTVELLAIITDPKDAGHPEKLYKLGQAVQAKVVDVSLKPQRFVLSLT
GSYELAKDGVCVGVVTNVLPHGLQVKLPFGGSGTVAVTDLSDAYKHNTLESYSKDQLIKC
YLLGCENGKWHLSLRQSRINPGQKKSVKDTEVLSLDSLEPGQIIRGYVKTVIEHGVFIRL
SRRITGRAQLQKSTQYFISSHKILADHLPPNTVLTTQILSIDKKGELVDLSLLPVDTGKA
DVLPESLGLPLRLVGEKKEKHNMKRKRRLSDSQQKETQTKKIKSKKSKVDDSDSGVEVYF
REEENETKPAPGKSSAGQARLQVVGGFSWDVGLSSLKPVSVDHNGDSSDGEDQDTSSKSK
KKTRHELEQGKKDAEKALMKREIELMNPNLRPEDGAAFERLLLASPNSSLLWLQYMAHHL
QATQIEQARAVAERALKTISFREEQEKLNVWVALLNLENMYGTEESLKKVFERALQFCEP
MPVYQQLADLYAKSDKAKEADALYKTMVKKFRQNKAVWLSYGTFLLQQGQSDAASALLQR
ALKSLHSKDSVDVIAKFAQLEFRYGDVEKGSAMFDKVLTSYPKRTDLWSVFIDLMVKHGS
QKEVRVLFDRVIHLSVSVKKIKFFFKRYLEYEKKHGTAQSIQKVKEKAMEFVESKGTEAS
S
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaatggaggaggactttccacgtggaggaacagccaaaaaacccacggaaagt
caaattgtggttcaaagatcagaagtagacaatctcttccaatcaagtgaacaatcagaa
acgaagaaaagaaaagggggtgacaaagacgatggcaaaaagattaaaaacatcaaaact
ggtaaaggccaagatgatgctttgaagctcaatgctgctggcaaccttgtggagattctt
cacatcaagaatctgaaggaaggcatgctgttcctgggttgtgtgaaagaggtgactgat
tttgaaatgaccgttagtctgacctgtggccttaaaggtttcctcagcatcaaaaacatt
agtgattcatacaccaagttactcactgagcacctcaactcggatgaagctttaacagag
gattttttgtctttgccacatctgtttatccccggcatggttatcagatgtgttatagcc
aaaattgacttgactaaagagggatcactgagcattcagctttccgtcaatcccaaaatg
gttaacaagttgcttgcctcaagttctgtaaaaactggcatggttttaagtggatttgta
gagagtgtagaggaccacggatatattattgacattggagtctcgggaagtaaagctttc
cttcccaagaatgccgtaaaggacaaacacaacaatcccgaagagttaaatgtgggacag
tatgtgacttcattagtggagaaagtaaaaaatgaaggccgtgtggtgcagctttccatt
attccgaagaccatcactcaggcatttgcagaagcagaccaaggctggaccctcacaaac
atactgcctgggcttctcgtcaaagcaaccattaataaggtcaccaaacatggactattt
gtaaagtttctgtctaacttcagtggtcaggtagactttctccacatggagccagagaag
gcatcgcactacaaggaaggagatgaggtgcgcgcctgtgttctgtatgtggatccatcc
actcgtttggtagggttgagccttcatagctaccttctacctggggcccgggttcacacc
gctcatccaagtggtatacagattggtcaagttgtggagaactgcaagatgactgttctg
catcacgcctctgggggtgtattagagttgccaaacaaaacgcaagcgtttgtccataaa
aaccacatgaaggaacagagtgctacagccaatgagaacagaactctggccaagacggaa
cacacctgtaggattctggatttttgcctgatagaccagatttattttgcctctttacgc
gagagtgtaattaagaagccattttttagatatcatgacattcatcctggtcaaattgta
gaggggacagtgtcagtgctatttgaacatggaatgattgtccatctttcggaccacatt
aaaggcctggtgcctcggacccatctgtcggatattgtgctgaggaatccagagaagaag
tacacggggggcatgaaagttaaatgtcgggtgttatctgtagatgcagaaaacaggaag
ctgtctctaactagaaaaaaggctttgattgaaagctccttgcctctgttcctgagctat
tccgatgcccgcccgggacgtgtctctcatggctatattgtgtgcgtcaaaaactttggc
tgcattgttcgtttcttcaacaatgttaagggacttgttcctctaaatgagctcagctgt
gaatctattgtcagcccagaggaggtcttctatgttggacaggtagtaaagatcaaagtt
cttcattgtgacgttgagaatgagaaattggtgctctcattcaaagctgcagtggaggga
aatgtcgaagaacctctcaagtcggactttgaatgtgatgttggaaagaaagtggatgct
cgcgtgctgaaaaagcttgtccgtgggtttgaagtcgccattttacctgatgaaatccca
gctgtgctgcccacaatgcacctcactgatcacttgtccaatgggcctttgctgtgggag
agtctgcaggagggagacaccatctccaaccttgtttgtttctacaagaacaaacagaat
attactctaaccaagaaaccaaccataaaatgggctttagaagaaggaattttggccaaa
gatttctcagagataacggtgggattgcagctatttggttggattaagaacataatggcc
tatggcgtcttcgttgagttcccctatggccttgttggtctttcacccaaatctgccatg
acagaaaaatttattccagatgcgacaacaccatttgaactaggccagactgtgattgcc
aaagtaacaaacattgatgaggaaaagcgtcggtttctggtgaccctgaagatgtcagag
gtcatatcgcctgtgggagaccaactgaccaggctgaccaatggcctgcaagagagacgg
gctgtgactgaaatgttgtccctgaaagaaaactgcgatctacaacatcagctgtcaaac
ctaactattgggcaaaaagtgaagctgacagtggattctgtggtggacacccatgccacc
tttaaatcagatgggctaattagtgctacaataatggccaccaagaaccattttattggt
ctaaatttatcacctggacaaaaagtgacagcggtcgtgctttttgtagacatcttatct
gctcatgtccatgtttccatcctccctagactattgtcaaagaagaaatctttaactgaa
ggtgcaaaatatgcttcaactgtgcagtttgtcgagaaagactttgccgttatctcacta
ggggatactgcacaactggcgatcatacaaactcgcagccatttaaatgaagttgtactt
catgatgcagagaggttgaaacccggaatgaccttttatgtggaggtgatcgatcggact
tgtgaggcattgcaagggctgcccttggtgtcttgggagcgtaatccagacaagcgccaa
cgcactatctctgagacccaaacggcaacaaagggaaactgttttggagatattgtgcga
ggtacagtgcgttcagtgaagcccacatgtattcagatcacactggagaatggaatactg
ggcagtgttcacgtgtctgaagtgttagagctggaccagatcggacgagggtcttttcct
acgtccaccattaaagtaggcagtaaggtcactgccagggttataggaggaagggagatc
acaagtcacagattcttgcctttttcacatccgaagttcaaattcaattgtcctgagctc
acactaattccaaacaaacttgaagccagtgatttcaaaccagtcatagctaaggaaaaa
cttggcagctattccgttggggaagaaatcacatgctttgtttcaaagtttcatccagat
aagaagtcactggaaattaccacagaccctaatattacaggaacagttgaacttcttgcc
ataatcactgacccgaaggatgctggtcacccagagaaactgtacaaacttggccaagcg
gtccaagcaaaggttgtagatgtgagccttaaaccacagcgatttgtgttgtcactcaca
ggatcatatgaacttgcgaaagacggtgtttgtgtgggagtggtgacaaatgtgctgccc
cacggtctccaggtcaaacttccttttggtggttcaggaacagtggctgttactgatctc
tcagacgcctacaaacacaacactcttgaatcctacagcaaagaccagctcatcaaatgt
tacctcttgggatgtgaaaatggcaaatggcatttgtctttgcgtcagtcgagaataaac
cccggtcagaaaaaatctgtgaaggacaccgaggtcttgtctttggacagtctggaacct
ggacagatcattaggggctacgtcaagacggtcattgaacatggagttttcatcagatta
tccagaagaatcacaggaagagcccaacttcagaagtcaacacagtactttatttccagc
cacaagattcttgcagatcatctgcctcccaacactgttctcaccactcaaattctcagt
attgacaaaaagggggagttggttgacctctctctgctcccagtggacaccgggaaggcg
gatgtccttcccgaatcgctgggtttgccactgcggctcgtgggagagaagaaggagaaa
cacaatatgaagagaaaacgcaggctgtcagatagtcagcagaaagagactcaaactaaa
aagatcaaatccaaaaaatccaaggtggatgacagtgacagtggcgtggaagtgtacttc
agagaggaagaaaatgagaccaaacctgctcctggtaaatcgtctgcgggacaggccagg
ttacaagtggtagggggattttcttgggatgttggacttagttccctgaagccagtctct
gtagatcataacggggattccagtgatggagaagaccaagatacaagcagcaaatcaaaa
aagaagacgcggcatgagcttgagcagggaaagaaggacgctgagaaggcgctgatgaaa
cgagagattgagctcatgaacccaaacctgaggccggaggatggcgctgcatttgagcgt
ctactgttggcttcaccaaacagctctctgctctggctgcaatacatggctcaccatcta
caggccacacagatcgaacaagcccgtgctgtggccgagagggctctcaaaacaatctcc
ttcagggaagagcaggagaaactgaacgtatgggtggccctccttaacctggagaacatg
tacggcacagaggagagcctgaagaaagtgtttgagcgagcgctgcagttctgtgagccc
atgcctgtttaccagcagcttgcagacctctacgccaagtctgacaaggccaaggaggct
gatgcgctctataaaacgatggtcaaaaagtttcgtcaaaataaagcggtttggctgagc
tatgggaccttcctgcttcaacaaggacagagcgacgctgccagtgctctcctccagagg
gcacttaagagtctgcattcgaaagacagtgtagatgtgattgctaagtttgctcagctg
gagtttcgttatggtgacgtcgaaaagggcagcgccatgtttgacaaagtgttgaccagt
tacccaaaacgcactgacctctggtccgtgttcatcgatctcatggtcaaacatggatcc
cagaaggaagtcagggttctttttgaccgtgtgattcacctgagtgtttctgtgaagaag
attaagttctttttcaagcgttatctggaatatgagaagaaacatggcaccgctcagagc
atccagaaagtcaaagaaaaagccatggagtttgtggaatccaaaggcacagaagcaagc
agctaa
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integrated database retrieval system
