Eucyclogobius newberryi (tidewater goby): 140377913
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Entry
140377913 CDS
T10929
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140377913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eny03041
]
140377913
03009 Ribosome biogenesis [BR:
eny03009
]
140377913
Enzymes [BR:
eny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140377913
Spliceosome [BR:
eny03041
]
Complex A
U1 snRNP components
U1 related factors
140377913
Complex B
140377913
Ribosome biogenesis [BR:
eny03009
]
Eukaryotic type
Pre-60S particles
Helicases
140377913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
BNIP2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
140377913
NCBI-ProteinID:
XP_072319627
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MPGFSDRDRGRERGYGGGPPRFGGGAGGNRGGGPMGKFGNPGERLRKKHWNMDELPKFQK
NFYQEHPDVTCRPLLDIEQYRRSKEVTVKGRDCPKPIMKFNEATYPSYVMDIIVKQNWIE
PTPIQSQGWPVALSGKDMVGIAQTGSGKTLAYLLPAIVHIQHQPFLEHGDGPICLVLAPT
RELAQQVQQVAAEYGQASRLRSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECSK
TNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLKD
HVQINIGALQLSANHNILQIVDVCNDMEKEDKLLRLLEEIMSEKENKTIIFVETKRRCDE
LTRRMRRDGWPAMGIHGDKSQQERDWVLNEFRFGKAPILIATDVASRGLDVEDVKFVINY
DYPNSSEDYIHRIGRTARSQRTGTAYTFFTPNNMKQASDLVSVLREANQAINPKLIQMAE
DRGGRGRGGRGGYKDDRRDRYSVGGRNSYGRSTFRDSDRGFDNGPKSAFGGNKAQNGGNF
GGNGGNSGSFGNSNYSNGHSNFGAPPNQAGSFGNQNFQGPPQFGAMQRPSQNGMNHPPFP
FPAQAPQPPPPMAPYPMQPPFPQ
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgccgggattttcagaccgagaccgcggcagagaaagagggtatggtggaggccctcct
cgttttggtggtggtgcaggtggaaacaggggggggggcccaatgggaaaatttggcaac
cccggagagaggctgcgaaagaaacactggaacatggatgagcttccaaagtttcagaag
aacttttaccaggagcatccagatgtcacatgcagacctttacttgatattgagcagtat
agaagaagcaaagaagttacagttaaaggcagagattgccccaaaccaataatgaaattc
aatgaagcgacatatccaagttatgtcatggacataattgtcaaacaaaactggattgaa
ccaactccaattcagtctcaaggttggcccgttgcccttagtggcaaagacatggttggg
attgctcaaactggttctggaaaaacacttgcatatcttcttccagccattgtgcacatc
caacatcaaccatttctggagcatggtgatgggccaatatgtttagtgctggcccccact
cgtgaactggctcagcaggtgcagcaggtggcagcagagtatggccaagcatcccgtctg
aggagtacctgcatctatggaggagcgcccaaaggtccacaaattagagaccttgaaaga
ggtgtagagatttgtattgctacgccgggtcggcttatagattttctggagtgtagcaaa
accaatcttcgccgttgcacatatctggtgcttgatgaagctgaccgcatgctggatatg
ggatttgagcctcaaattcgcaagatagtggagcagatccgaccagaccgccagactctg
atgtggagtgccacctggcctaaagaagtcagacagcttgctgaagatttccttaaagac
catgttcagatcaacataggagctctccagctcagtgcaaatcacaacatcctacaaata
gtagatgtatgcaatgacatggaaaaggaggacaaactgcttcgtttacttgaagagatc
atgagtgaaaaggagaacaagactattatttttgtggagaccaaacggcgatgcgatgag
cttaccaggcggatgagaagagatggttggccagcaatgggaattcatggagataaaagt
cagcaggaacgggactgggtcctcaatgagttcagatttggcaaagctccaatcctcatt
gctaccgatgtagcttcccgaggcttagatgtggaggatgtgaaatttgtcatcaattat
gactatcccaactcctctgaggattatattcatcgcattggacgcacagcccgcagtcaa
agaacgggtactgcgtacacattcttcacccccaacaacatgaaacaagctagtgacctc
gtctctgtgctccgtgaagctaaccaggccatcaaccccaaactgattcagatggcagaa
gacagaggaggtagaggaagagggggtagaggtggctacaaggatgaccgacgggatagg
tattctgtgggcgggagaaacagttatgggaggagtacctttagagatagcgatagaggg
tttgataatgggcccaagagtgcctttggtgggaacaaggctcaaaatggtggcaacttt
gggggaaacggtggtaactctggtagttttggaaacagcaattacagtaatggacacagt
aattttggggcaccaccaaaccaagctggctcctttggtaaccaaaactttcaggggcct
ccgcagttcggagccatgcagaggccttctcagaacggcatgaatcacccgccgttccct
tttcccgctcaagccccacagccaccaccaccaatggcgccctatcccatgcaaccaccc
tttccacagtaa
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