Eucyclogobius newberryi (tidewater goby): 140380710
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Entry
140380710 CDS
T10929
Symbol
strc1
Name
(RefSeq) uncharacterized protein strc1
KO
K24636
stereocilin
Organism
eny Eucyclogobius newberryi (tidewater goby)
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
eny03037
]
140380710 (strc1)
Cilium and associated proteins [BR:
eny03037
]
Other cilia and associated proteins
Stereociliary proteins
140380710 (strc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Stereocilin
Motif
Other DBs
NCBI-GeneID:
140380710
NCBI-ProteinID:
XP_072320724
LinkDB
All DBs
Position
Unknown
AA seq
2072 aa
AA seq
DB search
MTVREDAAAPSRLPPGFLQAPSRLLQAPSRLPPGSSRLPPGSLQAPSRLPPGSLQAPPGS
LQAPSRLLAVITITCAVQHACSESKVLQRKAVSTPASLEEDIQTVINQLHSLSEPKVQIR
SGSDPLPVEGVDLNAYYRVITNLYMLLQPLLREGFMEDLPKTLVCVLSGKQDCGLEAELI
KAVSVEMGPAIIAALSSLTSPSCSPLGKSGESYSFFTTYLRMSDSTKATLTGIQDIFVNI
LTYFPVSGNLVNAVSSLVDTVVRYTLEVLFSVLEVPVDYIKIALQFGVQVPTLDEQGKCE
HGDLKQLIMWGLRHNVSWSFGTALIDILLEVALPPDPSICAYPGPNCPSPGLPFQRSLLN
SNDNIDTHRNTPLQCDPQNLAELNDTICPEIVSGLRQSSSVSVLMFCQALSSLNAKQIKL
VWSNACYVFEAAMSPLTSRTAADCPAVGTFPPPVINPTSAPLNVVPVRRVREASNLNQLA
CNYNSWLDNISVDPVLVSLCGDNQREEFVKRVCSNATLVKKLVSDSTNLWLYAYCGNSSA
DVAYMVTELCLYEQWMFQASVINPYLLEFCTILDKERLSLLICQNIGFYMLLFSSPANVH
LMPNCSQVLPMPVIPDTDVDTIDPCQYSLWQDVSLIHLNVITICAQFDANDFNREVCANQ
SFLNRLLDNKLNEWLRPHCAKAVLEIPYQSNDQRFNTTEWCDYQMWASRYVDDSVVGLCW
QHDQVAFQKNVCCNLGVFQRLLQDPRNAWLRSVCNETEEMEKAQLIQQVCKYADWTTPII
VDMTEVAVCAVADPDNFVSKVCRNDTVLKNLLANQDNTWLIQHCSNHTKVGGQGTVGFNP
SEQCLYLSWSVSLPDPVLITMCWKQDQAHFASTICPNPNLLSALTREPSSAWVASACATY
ANLTNGGTVQPHVCLAQDVVKKFNWTCSQHLILACQPGAGQNVMMQMIARCWLENVRSRM
AELLTPEVSAVLDQAASLAVVSFFALEEIQNTTYHVAENVRLDILMSVDVFLKKETDFVK
KRVLLQCFGRVLTSLMQVTRDITQEEFGFIQEYFNIPVDNLREVLSGSHITTIRMILLYY
TRHKNTLQLPEKYMSTLASVLFQTHLAADGSLFSDLASLLALVSPADIQGLPRLQNNINV
RETINLNLDRMTLDQRRAFGAWFGTVMLPINITRGQQSLIRDTGNLIAYLPFYNFQHLSA
AQLLDGLDMLQQNTLSPIQREFIAQSLIGTYKNLTAQDFLRLGNITCWADPEDLIVYKGT
EAFPVIQDLIRNCIRNGLNLPSHMLSRLLLNSTQFNDSSKLTVEQMKDTAPLMPMLGVSF
IQSLSPSQLLDALPLIKSVTFSPAQAAIIVDKLSSVMKMNSPGTLQQLGSLVLGVKSEFL
LTLTSEKLLSSLPSMAQQTPSFSPVQANAIATRLWGFLDVPSWLTEVEPLLYCTPLVSVL
PRTPQLVNNLTISVTKPWNTQQAQAIFNKVLELKPRLIKEDFESLGTAGQGVSCKVLLER
LRAKRSPSSVKAILLVLRQQPSLLHTSLKKCVADEVYQYKFFPEVLAHFGAELALAMPVS
TVKKFTVDLMQSLKALIVAEPQYFLLLSRRKQELLVDKIVQRLRMYTGVYTEEEFRSLGI
MATFVNDEILIQLDRTFFMENINFLHTFCYSATKMDIVARILQDTNTFGPVKTWTKATLS
QVGRFLFFLPTNKLQELPQELMTVARIEKLFMDQRQWEVGPIGSHCIDANERRSNFKKQQ
FVLQFFLGFLKVLSTPMLVPTCAILHSTTPSVWTSTSLTSMSSSEFVNCLELMGQDPFLP
SYHRNQLLQKVKKIHGPVSSFSPSLISQLGRIAVEMTNEELSSLQLAERNTIAVLGAVDL
WTTKQQEILFAAVLDSTKQRVSQLDSSTLVALGYIVCGAKASEIIYFNAVEFSKAVHYLG
QLKLQCTEDQLSTMVGLLNHALAFGPTPFWGTDVFIEIGIIAAGIPDFDMSSLVSAQIEG
ITPLAISVIPPAKFTVVLSHQQISMFSNEQAEAVSPTVIDALSYMQKRALAMVLTPWEDR
PVDLRGRSLGLALSHCPVCLLLGLLMLLVIPS
NT seq
6219 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgagagaagatgctgcagctccctccaggctccctccaggcttcctccaggct
ccctccaggctcctccaggctccctccaggctccctccaggctcctccaggctccctcca
ggctccctccaggctccctccaggcttcctccaggctccctccaggctcctccaggctcc
ctccaggctccctccaggctcttggccgtcatcacaataacctgcgcggtccagcatgcc
tgctcagagtccaaagtccttcagagaaaggccgtgtccactccggccagcctggaggag
gacatccagacggtgatcaatcagctccactctctgtctgaacccaaagtacagattcgc
agcggcagtgatcctctcccagtcgagggcgtggacctaaacgcttactacagagtcatc
accaatctgtatatgcttctgcagcctctactgcgagaggggttcatggaagacctccca
aagactttagtatgcgtgttatcaggaaaacaggactgcggcctggaggcagagctgatc
aaggctgtgtccgtggagatgggtccagccatcatagctgcattgagctccctgaccagt
cccagctgttctccgctgggcaaaagcggagagtcatacagcttcttcacgacgtatctg
cggatgagcgactcaactaaggcaacgctgaccgggatacaagacatctttgtgaacatc
ctgacttacttccctgtctctggaaacctggtgaatgccgtcagcagcctcgtggacact
gttgtcagatacactttagaggtgttgttttctgttctagaggtaccagtggattacata
aagatagcactgcagtttggggttcaagtgcccacactggacgaacagggaaagtgtgag
cacggtgatttgaagcagcttattatgtggggtcttcgtcacaatgtgagctggtctttc
ggcacagcacttatcgacatccttctggaggtcgctcttcccccggacccgtccatctgc
gcatatcccggccccaactgtccgagccctggactccctttccagcgctccctcctgaac
tccaacgacaacatagacacgcaccgtaacaccccgctccagtgcgacccccagaatctg
gcagagctaaacgatacgatttgtcctgaaatcgtgtcagggttgagacaatcctcttct
gtctctgtgctgatgttctgccaagccctgagctcactcaacgccaagcagataaagttg
gtgtggagcaatgcttgttatgtgtttgaagctgccatgtctccactgacgagcaggaca
gcggctgattgtcccgctgtaggcactttccccccccctgtcatcaaccctacgtctgcc
ccgctgaacgtcgtcccggtgagaagagtcagagaggcgtccaacctcaatcagctcgcc
tgcaattacaacagctggctggacaatatttcggtggaccctgtgctggtgtcgctgtgc
ggagacaaccagcgagaggagtttgttaaacgagtgtgcagcaatgcaacgctcgtaaag
aagcttgtttcggacagcaccaatctctggttgtacgcgtactgtgggaactccagcgca
gacgtggcctacatggtgaccgagctctgtctttacgagcaatggatgttccaagcttca
gtaattaacccgtacctccttgaattctgcacgatactggacaaagaacgcctctcactc
ctcatctgtcaaaacataggcttctacatgcttttgttttccagtcccgccaatgtacat
ctcatgcccaactgttcgcaggtgctgcccatgcctgtcattcctgacaccgacgtagac
acaatcgatccatgccaatactcgctttggcaagacgtgtccctgattcatctcaatgta
ataactatatgcgcacagtttgatgcaaatgattttaacagagaagtatgtgccaaccag
tcttttctgaaccggcttctggacaacaagctcaacgagtggctgagaccacactgtgca
aaagctgttttagaaataccatatcagagcaatgaccaacgctttaacacaacagagtgg
tgcgattatcaaatgtgggcgagtcgctatgtggatgactccgtggttggtttgtgttgg
cagcacgaccaagtcgcttttcagaaaaatgtctgttgcaacctaggtgtctttcaaagg
ctgctccaggaccctcgcaacgcttggctgcgatcagtgtgcaatgaaactgaagaaatg
gagaaggcgcagctcatacaacaggtttgtaagtacgccgactggaccactcccattatt
gtggacatgactgaagtagctgtttgtgctgtggccgaccctgataacttcgtctccaaa
gtttgccgcaatgacacggtgctgaaaaacctactggccaatcaggacaacacttggctc
attcaacactgctccaaccacaccaaggttggaggtcaaggcactgtagggttcaacccc
agcgagcagtgcctgtatttgtcctggagcgtctcactgccagaccctgttctcataact
atgtgctggaagcaggaccaagcccatttcgcctccaccatctgccctaatccaaatctt
ctgtccgcactgacacgagaaccgtccagcgcctgggtggcatctgcgtgtgccacttat
gccaacctcacaaacggtgggacagtgcagcctcacgtctgcttggctcaagacgtggta
aagaagttcaactggacatgctcacagcacctcattttagcctgtcaacctggggcaggg
caaaacgtgatgatgcaaatgatcgcgcgctgttggttggagaacgtgcggagccggatg
gccgagttgctgactccggaggtgagcgcggtgttggaccaggccgcgagcttggctgtg
gtctcgttctttgcgctggaggagattcagaacacgacgtatcatgtggctgagaatgtg
cgtctcgatattctgatgtctgtggatgtgtttctcaagaaggaaaccgactttgtcaag
aagcgggtgttattgcaatgctttgggagggttctcaccagcctgatgcaggtgacgcgg
gacatcacccaagaagagtttggcttcatccaggagtacttcaacataccagtggacaac
ttgcgggaggttctcagtggatctcacatcaccaccattcggatgatcctcctgtactac
accaggcacaagaacacactacagcttccagagaagtacatgtccacgctggcttcagtg
ctgttccagacgcacttggccgctgatgggagtctgttttctgacctggcctctctcttg
gctctggtcagtccagccgacatccagggtctgcccaggctccagaacaacatcaatgtg
cgagagaccatcaacctgaacttagaccggatgactctggaccagcgtcgtgcgtttggc
gcctggtttggcacagtcatgctcccgatcaacatcacccgaggtcaacaatcgctcatc
agggacaccggcaacctgatcgcttacctgcccttctacaacttccaacacctctcggct
gctcagctcctggatgggttagatatgctgcagcaaaacaccttgagtcccatacagcga
gagtttatagcacaaagcctcattgggacgtacaaaaacctgacggctcaggattttctc
aggcttggtaacatcacatgctgggccgatccagaagatctcattgtgtacaaaggaact
gaggcctttcctgttatccaggacctcatcagaaactgcatccgcaatggactcaacctg
cccagccacatgctttctcgtttgctgctgaacagtacccagtttaatgactcctcaaag
ctgacagtggagcagatgaaagacacggctcctctcatgcccatgctcggagtgagcttc
atacagagcctcagtccatcacagctactcgatgcactgcctctcatcaagtcagtcaca
ttcagcccagcacaggctgctataattgtagataagctgtcttcagttatgaaaatgaat
tcaccggggacactgcagcagcttggatcccttgttttgggagttaaaagtgaattcttg
ttgacactgacctctgaaaagctcctgtcgtcgctgccatctatggcacaacagactccc
agcttcagcccagtccaagctaatgccattgccacaaggctctggggctttttagatgtg
ccgagctggttgactgaagtagagcctctgctctactgtactcctttggtcagtgttctg
cccaggactcctcagctggtcaacaacctcaccatatcagtcacaaagccctggaacaca
cagcaggcccaagctattttcaacaaagtgcttgaattaaagccacgcttaatcaaagaa
gacttcgagagtcttgggacagcaggacaaggagtgagctgtaaagttttacttgaacga
ctgagagcaaagcgctccccttcatctgtcaaagcgatcctgctcgtcctccgacaacag
cccagtcttcttcacacctcactgaaaaaatgtgttgctgatgaggtgtaccaatataag
ttcttccctgaagttctggcacattttggagctgaactggctctggcaatgccagtgagc
actgtaaagaagttcactgtggacctcatgcagtctctcaaagctctcatcgtcgcagag
cctcagtattttcttctactgtccagacggaaacaggaacttctggtggataaaattgtt
caaagactgagaatgtacacgggcgtgtacacagaggaggagtttcgctccctggggatt
atggccacatttgtgaacgatgagatattaattcagcttgacagaacctttttcatggaa
aacatcaattttctacatactttctgttatagcgctactaaaatggacatagtagcacga
atcttgcaagatacaaatacttttggacctgtgaagacatggactaaggccacacttagt
caagtgggcaggtttctcttctttctacccaccaataaacttcaagagctcccacaggag
ctgatgactgtggcccgtattgagaagctgttcatggaccagcgacagtgggaagttggg
cccattggaagccactgtatcgatgccaatgagaggaggagcaacttcaaaaaacagcaa
tttgtcctgcagttttttctgggtttcctcaaagtactttcaacccctatgctagttcct
acctgtgcgatcctccattcaaccactccctctgtttggacatctaccagcttgaccagt
atgtcatcttctgagtttgtcaactgtttagagttaatgggtcaggacccatttttgccc
tcttatcaccgcaaccaattgttacagaaagtaaaaaaaatacatggtccagtgtcctcc
ttctccccgtccctcatctctcagcttggaagaatagcagtggaaatgacaaatgaggag
ttgagcagcctccaacttgctgaacgtaacaccattgctgttcttggggctgttgatcta
tggaccaccaaacaacaagaaattctgtttgcggctgtattagactccactaagcagcgt
gtgagccagctggactccagcactctggtggcattgggatatattgtatgtggggcaaaa
gcatctgaaattatttattttaacgcagtagagttcagtaaggcagtgcactaccttggt
cagctgaagctgcagtgtacagaagaccagttgagtactatggtcgggctgctgaaccat
gcccttgcttttggacccactccattctggggaactgatgttttcattgaaattggaata
atagcagctggtattccagatttcgatatgtcttcgttggtaagtgctcaaatcgaagga
atcacacctctggctatttcagtcattccacccgcaaaatttactgttgtgttaagccat
caacagatcagcatgttctccaatgaacaggctgaggcggtgtcccccacagtgattgat
gcactgtcttatatgcaaaaacgagccctggccatggtgctgactccctgggaggacagg
cctgtggacctaagagggagatcgctggggctggcgttgagccactgtcctgtgtgtttg
ctgctgggattgctgatgctgctggttatcccatcatga
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