Eucyclogobius newberryi (tidewater goby): 140381214
Help
Entry
140381214 CDS
T10929
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1-like isoform X1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
eny Eucyclogobius newberryi (tidewater goby)
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
eny04040
]
140381214
Ion channels [BR:
eny04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
140381214
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
Ion_trans
LSDAT_prok
Cupin_NOL9
Motif
Other DBs
NCBI-GeneID:
140381214
NCBI-ProteinID:
XP_072321341
LinkDB
All DBs
Position
Unknown
AA seq
1595 aa
AA seq
DB search
MEARGLMARRGTSGSVKRNSIKRSASSASQKIHRAWIEKSFQKRECSRIILSKDPLRCSC
GQLVAQHTALSVENSAALEVQPGERWNALRHTQSMPTDAYGVVEFQGGGLVNKAMYIRVA
YDSKPDALLQMMVKEWQLELPTLLVSVHGGLQNFELPPKLKQVFGKGLIKASVTTGAWIF
TGGVSTGVIRHVGDALKEHSSKSRGKVCAIGIAPWGIIENKEDLIGKDVTRPYQTMSNPL
SKLSVMNSSHSHFILADNGTTGKYGAEVRLRRQLEKHISLQKINTRLGHGVPVVCLILEG
GPNVISIVLESLKEEPPVPVVVCDGSGRASDILSFAHKYCEEDGTVSEGVKDQLLVTIQK
TFNYSRGQAQQIFSMVTECMKRKSLITVFRMGSEGQQDIEMSILTALLKGTNACATDQLS
LALAWNRVDIARNQIFVYGLHWPPVIGSASDRPKSPGAAQRVVTVAGKWKAKGKKVKGKG
KDKPEPPKETDPRKLEMLNWVNALEQSMMDALVLDRVDFVKLLIENGVNIHHFLTIPRLE
ELYNTKLGPANTLHFVVRDVKKGNLPPDYQITLIDIGLVLEFLMGGAYRCNYTRKSFRTL
YNNLYGLKRPKALKLLGMEDDEPRQKGKGKKNKKKEEEIDIDVDDPEVCRFQYPFHELMV
WAVLMKRQKMALFLWQRGEEAMAKALVACKLYKAMAHESSQSELVDDIYQDLENNSKEFG
QLAYELLDQSYKHDEQVAMKLLTYQLKNWSNSTCLKLAVAAKHRDFIAHTCSQMLLTDMW
MGCLRMGKSNSLNVILGIIFPPYILLMDFRLGDESSSFQSEESKGKDDDKSNKDAVSNVD
TMSKKGDEEENPKANKKRVPIGKKIYEFYKTPFTKFWFNTISYLGYLMLYNYIILVKMER
WPSLQEWIVISYIITLGLEKVRQILMSEPGKLKQKINVWLEDYWNITDLAAISTFLLGLL
LRLQAEPYMGYGRVIYCVDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDMLYFVVIMLV
VLMSFGVARQAILHPDEKPTWRLARNIFYMPYWMIYGEVFADSIDLYAMEINPPCGDNMY
DEDGKKLPPCIPGAWLTPAIMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRY
QLIMTFHDRPILPPPLIVFPHIYLALRRICCRCRPRKAEGEPNDQDRGLQLVLSPEELKN
LYEFEEQCVEEYFREKEDEKQSSNNERIRVTCERVENMFMRLEEVNEREHSMKASLQTVD
LRLGQLEEFSGRMMNALEKLAGIDRSQLVRTRSRDSSIYEPGPLLRHGSINSTDGYSLYR
YQLETEEKGPVSAEPEGSKGPLSPERRRTDGGTGAEPNAAVKEYGPTLEVTAQKERRHSV
SSNVGILITPSDSEPPKPDQTQDQSASSPGPTPSSPGPTPSSPGPTPSSPGPTPSSPGPT
PSSPKATEKHKLEATVSCPLEKSKVMQLLSSPTFSSPPTRRRAMSNQWAMSSSMKPGSKS
PIMPRWGSEHKVHPSPLGQASGSTQGVVVGEERTEEMEEEERIYAPLRSKSLNVKTRKTK
KQEDEEEAAKKLHGSSSVRDLVSAFSSRTEAPPDL
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcgaggtctcatggcgcgcagaggcaccagtggctcagtcaaacggaactcg
atcaaacgcagcgcttcatcggcctcacagaagattcaccgggcgtggattgagaaaagc
ttccaaaaacgagaatgttcccggatcatcctgagcaaagacccgctcaggtgcagttgt
ggtcagttggtggcgcagcacacggccctgtcagtggagaacagcgccgccctagaggtg
cagcccggagagagatggaacgcgctcagacacacacagtccatgcccacggacgcctac
ggagtggtggagtttcagggcggaggcctcgtcaacaaggccatgtacatccgtgtggcg
tatgactcgaagcctgacgcgctgctgcagatgatggtgaaggagtggcagttggagctc
cccacgctgctggtgtccgtccacggggggctgcagaacttcgagctgccccccaagctg
aagcaggtctttgggaagggcctgatcaaagccagcgtcaccaccggagcttggatcttc
accgggggagtcagcacaggagtgatccgccatgttggagacgcactgaaggagcactca
tccaaatccagagggaaagtctgcgccatcggcatcgctccgtggggcatcatcgagaac
aaggaggacctgatcggcaaagacgtgacgcggccgtaccagaccatgtccaaccctctg
agtaaactctccgtcatgaacagttctcactctcacttcatcctcgccgacaacgggacc
acagggaagtacggagctgaggtccgcctgcgcaggcaactggagaagcacatctccctg
cagaaaatcaatactcgtttgggtcacggcgtgccggtcgtgtgtctgatcctggaggga
ggtcctaatgtgatctctatagttctggagagcctgaaggaggagccgcctgtgcctgtg
gtggtgtgtgatggcagcgggagggcatctgacatactctcctttgcccacaaatactgc
gaggaagacgggaccgtcagcgaaggcgtcaaagatcagctcttggtcacgattcagaaa
acgtttaactacagtcgcggtcaggctcagcagatcttctccatggttaccgaatgcatg
aagagaaagtctctgatcacagtgttccgaatgggctctgaggggcagcaggacatcgag
atgtccatcctcacagctctgctcaaagggacaaacgcgtgtgccacagaccagctgagc
ctggctctggcctggaaccgagtggacatcgcacgcaaccagatctttgtctatggactc
cactggccgcctgtgatcggaagtgccagtgaccgtccgaaaagccccggagcagctcag
cgtgtggtgacggtggctgggaagtggaaggccaaagggaagaaggtcaaaggcaaaggc
aaagacaaacccgagcctccgaaagagacggacccacgcaaactggaaatgctcaactgg
gtgaatgctctggaacagtctatgatggacgcgctggtgttggatcgagtggactttgtc
aaactgttgattgaaaacggagtgaacatccatcacttcctcaccatcccgcgcctcgag
gaactctacaacacgaaacttggacctgccaacactttgcactttgtggtcagagacgta
aagaagggcaaccttcctccagattaccagatcacgctgattgacattggtttggtactg
gagttcctgatgggcggggcttatcgctgtaactacaccaggaagagcttcaggactctc
tacaacaacctgtacggactcaaacggccaaaagctctgaaacttctcgggatggaggac
gatgagccgcgtcagaaggggaaagggaagaagaacaagaagaaagaggaggagatcgac
attgacgtggacgacccggaggtctgcaggttccagtatcccttccacgagctgatggtg
tgggcagttctcatgaagcgtcagaagatggcgctgttcctgtggcagcgcggggaggag
gccatggccaaagctctggtggcctgtaaactgtacaaagccatggctcacgagtcgtca
cagagcgaactggtggacgacatctaccaggacctggagaacaactcaaaagagtttggt
cagctggcgtacgagctgctggaccagtcgtacaaacatgacgagcaggtggccatgaag
ctgctgacctaccaactgaagaactggagcaactccacctgcctcaaactcgctgtggcc
gccaagcaccgagacttcatcgcccacacctgcagccagatgctcctcaccgacatgtgg
atgggctgtctgcgcatgggcaagagcaacagcctcaatgtgattttgggcatcattttc
cctccgtacattttgcttatggactttcgtctcggagatgagtcttcctcctttcagagt
gaggagagcaaaggcaaagatgatgacaagtccaataaggatgccgtctcaaatgtagac
accatgtctaagaaaggggacgaagaggagaacccaaaagccaacaagaagagagttcca
atcgggaagaagatttatgagttttacaagacaccgttcaccaagttctggttcaacact
atctcgtacctgggttatctgatgctgtacaactacatcatcctggtgaagatggagcga
tggccgtctcttcaggagtggatcgtcatctcctacatcatcaccctgggcctcgagaaa
gtccgacagatcctgatgtcggagccggggaagctgaagcagaagataaacgtgtggctg
gaggattactggaacatcacggacctggcggccatttccaccttcctgctggggctgttg
ctacggttacaggccgaaccgtacatgggctacggccgcgtcatctactgcgtcgacatc
atcttctggtacatccgcgtgctcgacatctttggagtcaacaagtacctgggcccctac
gtcatgatgatcgggaaaatgatgattgacatgctgtacttcgtggtcatcatgctggtc
gtcctgatgagcttcggcgtggcgcgacaggccatacttcacccggacgagaaacccacg
tggcgcctggcgaggaacatcttctacatgccgtactggatgatctacggagaggtgttt
gcagactccattgacctgtacgccatggaaatcaatcctccgtgtggtgataacatgtac
gacgaggacgggaagaagctgcccccgtgcatccccggtgcctggctcacccccgccatc
atggcctgttacctgctcgtggccaacatcctcctggtcaacctgctcatcgccgtcttc
aataacacgttctttgaggtgaagtccatctcaaaccaggtgtggaagttccagcgttat
cagctgatcatgacgttccacgaccgcccgatcctgccgccgccgctcatcgtgttcccg
cacatttacctggcgctgaggagaatctgctgccggtgtcgaccacggaaagccgagggc
gaacccaacgatcaagaccgaggcctgcagctggtgctgagtccagaggagctgaagaac
ctgtatgagtttgaggagcagtgtgtggaggagtacttcagagagaaggaggacgagaag
cagtcgtccaacaacgagcgcatccgggtcacgtgtgagagggtggagaacatgttcatg
cgtctggaggaggtgaacgagagggagcactcgatgaaagcttccctgcagacggtggac
cttcgcttgggtcagctcgaggagttctctgggcgaatgatgaacgcgctggagaaactg
gccggtattgaccgctctcagctggtccggaccagatccagggactcatccatctacgag
cccgggcctttactgcgacacggcagcatcaacagcacagacggatacagcctgtacaga
taccagctggagacggaggagaaggggccggtcagcgctgagccggagggaagcaagggt
ccgctgagtccagaaaggagacgcacagatggaggcacaggtgccgagccaaacgctgcg
gtgaaggagtacggtcccacgctggaggtgacggcacagaaggagaggagacactccgtt
tcttctaacgtgggcatcctgatcacacctagcgattcagagcccccaaaaccggaccaa
acccaagaccagtccgcttcgagtcccggaccaaccccgtcgagtcccggaccaaccccg
tccagtcccggaccaaccccgtcgagtcccgggccaaccccgtcgagtcccggaccaacc
ccgtcgagtcccaaggccacagaaaaacacaaactggaggccaccgtttcgtgccctctc
gaaaagtccaaagtcatgcaacttctatcatcgccgaccttcagctccccgcccacgcgc
aggagggcgatgagcaaccaatgggcaatgagttcttcgatgaagccggggtccaaatct
cccatcatgcctcgctgggggtcagaacacaaagtgcacccgtcgccgttgggacaggct
tctggatcgacgcagggcgtcgtcgtcggcgaagagcgaacggaggagatggaggaagag
gagaggatctacgcgccgctacggtccaaaagtctaaacgtaaaaacgcgaaagacgaaa
aagcaggaggacgaggaggaagcggcgaagaagctgcacgggtccagcagcgtcagagat
ctggtgtcggcgttcagctccaggactgaggcaccgccggacctgtga
DBGET
integrated database retrieval system
