Eucyclogobius newberryi (tidewater goby): 140381349
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Entry
140381349 CDS
T10929
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
140381349 (pcdh20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
eny01009
]
140381349 (pcdh20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eny04515
]
140381349 (pcdh20)
Protein phosphatases and associated proteins [BR:
eny01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140381349 (pcdh20)
Cell adhesion molecules [BR:
eny04515
]
Cadherins
Protocadherins
140381349 (pcdh20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Adeno_E3_CR2
Sensor
CD34_antigen
Motif
Other DBs
NCBI-GeneID:
140381349
NCBI-ProteinID:
XP_072321497
LinkDB
All DBs
Position
Unknown
AA seq
890 aa
AA seq
DB search
MINKKHPCLSKRGGTWGLCILLLYTTPFPCLGNFNKAKELIYKIKEGLPRGTFIGAIGVD
LNLDFNAEPPFLFNLAQKKVSEQYITLNNTTGEIYTSATEIDRETLCPDNSEVKACVLTL
DVLVLPQQYFQLVKVKIVIEDVNDNRPKFPVDEIILTIPENSPVNARYAVEQSAVDPDLG
LHGVQTYWLVNDFAVFTLDVEENDGGELTPFLIVTETLDRETQAEYITDIIAEDGGTPPL
LGAATLKILISDVNDNCPKFTESHLNVTVHGNTSKGAPIARLHAYDPDLGSNAQISYAYS
ERVPRETRSLFHLDRNTGVIKLAGKIESGTARHYKLTVLANGPGCIPAVAAVTLNIVKML
SGPPAIMPRYIATEKDGVVYLKESEPPLSPIAFYTIKNVGSNQKVDCHLDGSGPFRLSPY
QLIKNEYLLETTEALDYETTQEFDLIIVANNSQGLVIKAFLKIQVLDENDNAPVFQQSIV
ELTIEENNPPNTFLTQFQATDQDSDSRGEVVYLLGGDAPGIFELDRVTGVLTVTTSLDRE
EKETYRFIVRALDQGTPRRESIATVVLTVQDRNDNSPRFINKDFTFFVPENFPGYGEIGV
LSVRDADAGENGWVALSILNGTDIFMIDTGRGILRAKTSLDREQQGTYQLWIEAVDGGEP
ALSSITMVTVLLLDVNDNPPIVLFPQSNLSYMLVLPSTLPGTSITEVYAVDKDTGMNAVI
AYSIIKRKGGEPGSFAIDPDTGNITLKRELSNRGLCSLLVKVSDHGQPEPLYSTVMVNFF
VNETVSNESYIHSLLTREADIEVEEKPWFIGQMKDGPERYELFPCKPVLIALSVTCLGLF
LLVVMLMSYICCKRFKRHRKKKKSETEIPLKMNHESVHVANRKIRQISNL
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacaaaaaacacccctgccttagcaagagaggaggcacatggggcctgtgcatc
ctcctgctctacaccacccctttcccctgtttgggaaatttcaacaaagcaaaggagctc
atctataagataaaggagggattaccacgtggaaccttcataggggctatcggagtcgac
ttaaacttggattttaatgctgagcccccctttttattcaatctggctcagaagaaggtc
agcgagcagtacattaccctcaataataccaccggggagatttacacatctgccactgag
attgacagggagaccctctgtcccgacaactcagaggttaaggcctgtgtcctgactctg
gatgtgctggtgttaccacaacagtactttcagcttgtcaaagtcaagattgttattgag
gatgtgaacgacaacaggccaaagttccccgtggatgaaatcatcttaactatcccggaa
aattcacccgtcaatgctcgttacgcagtggagcagtcggcggttgacccagacttggga
ctccatggcgtgcagacgtattggctcgttaatgactttgcggtctttactttggatgtt
gaggaaaatgacgggggagaattgacacccttcctcattgtgaccgaaacattggacaga
gaaacgcaagcagagtacatcacggatattatagcagaagatggcgggacacctcctctt
ctcggggcggcaactttaaaaatactgatctcagacgtcaacgacaattgtccaaaattc
acagagtctcatttgaatgtcactgtccatgggaatacaagtaaaggggcaccaatagcg
cgactccatgcttatgaccctgacctgggctctaatgctcagatcagctacgcctacagt
gagcgtgtgccaagggagactaggagcttgttccatttggacagaaacacaggcgtcatc
aagctagccggcaaaatagaatctggcactgcccgacactacaaactgactgtattagcc
aatgggcctgggtgcatcccagctgttgccgctgttactctcaacatagtcaaaatgctg
agtggacctcccgccatcatgccaagatacatcgcaactgagaaagacggagttgtttat
ttgaaagaatcagaaccgcctctttctccgatagctttttacacgatcaaaaatgtaggg
tcaaaccaaaaagtggactgccatctggatgggagtggcccatttaggctaagcccctac
cagctgattaaaaatgaatacttactggaaaccacagaagcactggactatgaaacaaca
caagagtttgacctaatcatcgtcgcaaataattcacaaggcttagtgatcaaggcgttt
ttaaaaattcaagtcttggatgagaatgacaatgccccagtgtttcaacagtctatagtt
gagctaaccattgaagaaaacaacccgcccaatacgttcctaacgcaattccaagctaca
gatcaagatagcgatagcagaggagaggttgtctatcttttgggaggggatgcacccggc
atattcgaactggatcgagttaccggcgtcctcacagtcactacatcactggaccgcgaa
gagaaggagacgtatcgtttcattgtgagggcactggaccaggggacaccaagaagagag
tctattgcaactgttgtgctaaccgtgcaagaccgcaatgacaacagcccacgctttatc
aacaaagattttactttctttgtgccagagaatttcccaggatatggcgagattggagta
ctttccgttagagatgcagacgcaggggaaaatggttgggtcgcgctgtcgattttaaac
ggtaccgatatttttatgattgatacaggtcgtggtatattgagagccaaaacgtcgctc
gacagagaacagcaagggacctatcagttgtggattgaagctgtggatggcggcgaaccg
gctctgtcttccatcacaatggtaacagttttattattggatgtaaatgacaatccacca
atcgtcttatttccgcaatcaaacttgtcgtacatgctagttctacccagcacgctgcct
gggacgtcgatcacggaggtttacgccgtggataaggatacaggcatgaacgctgtgatt
gcttatagtatcatcaagcgaaaaggtggtgaaccaggatctttcgccattgaccccgat
actggaaatattactctaaaacgtgaactaagcaaccgaggtttatgcagtttactggtt
aaagttagcgatcacggacagccagagccactctactcaacagtcatggtaaactttttt
gtgaatgaaactgttagcaacgagagctacatacacagcttgctaaccagggaggcggac
atagaagtggaagaaaaaccgtggtttattggtcaaatgaaggacggacccgaaagatat
gagctgtttccctgtaagccagttctcattgctctttctgtgacgtgtctagggctgttt
cttctagtggtaatgctaatgtcgtacatttgctgtaaacggtttaaaagacatcgaaag
aagaagaaatctgagactgaaataccattgaaaatgaatcacgaatcggtgcatgttgcg
aacagaaaaatcaggcaaatctcaaatctttga
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