Emys orbicularis (European pond turtle): 135873296
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Entry
135873296 CDS
T11511
Symbol
ARFGEF1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135873296 (ARFGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eob04131
]
135873296 (ARFGEF1)
Membrane trafficking [BR:
eob04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
135873296 (ARFGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
CheX
Motif
Other DBs
NCBI-GeneID:
135873296
NCBI-ProteinID:
XP_065253767
LinkDB
All DBs
Position
2:61392640..61574516
Genome browser
AA seq
1848 aa
AA seq
DB search
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKAETEKQSPPHEEAKP
GSSTLPPVKSKTSFIEADKYFLPFELACQSKCPRIVSTSLDCLQKLIAYGHLTGNAPDST
APGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQMEKERHRQQHHLQQSPLSHHE
PESPQLRHLPSQTVNQLPQDHEGELDHSTNDVDKSLQEDTEAENGSDIYSAENEQTEADQ
AAAAENLSKSDAGTYDGENNECEEKAQDIVQSIVQEMVNIIVGDVEGTAESGSADGTIGT
LEDGSDSENIQANGIPGTPISVAYTPSLPDDRLSVSSNDTQESGNSSGPTPGAKFSHILQ
KDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKILSLQLLLSILQNAGPVFRTNEMFINA
IKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYILETSTS
SFDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELGM
TNIQELSLRKKGLECLVSILKCMVEWSKDQYVNPNSQTTLGQEKPTEQESNETKHTETIN
RYGSLNSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYL
QEQGMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSA
LRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHS
PQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISMKETKELVIPTKSSKQN
VASEKQRRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAAF
SVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTVSSGITEMKQ
KNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKPRYISGTVRGREGSF
TGTKDQAPDEFVGLGLVGGNVDWKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDGNAI
VDFVRWLCAVSMDELLSATHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGC
NPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKRNRSPTIRDMVVRCI
AQMVNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTIVFEKHFPATIDSF
QDAVKCLSEFACNAAFPDTSMEAIRLIRHCAKYVSDRPQAFKEYTSDDMNVAPEDRVWVR
GWFPILFELSCIINRCKLDVRTRGLTVMFEIMKTYGHTYEKHWWQDLFRIVFRIFDNMKL
PEQQTEKAEWMTTTCNHALYAICDVFTQYLEVLSDVLLDDIFAQLYWCVQQDNEQLARSG
TNCLENVVILNGEKFTLEIWDKTCNCMLDIFKTTIPHALLTWRPTGGEAGPVSPSALREK
QLDTISQKSVDIHDTVQPRSSDRHQIQPIVGSTASEEISKTRPTAKFPEQKLFAALLIKC
VVQLELIQTIDNIVFFPATSKKEDAENLAAAQRDAVDFDVHVDTQDQGMYRFLTSQQLFK
LLDCLLESHRFAKAFNSNNEQRTALWKAGFKGKSKPNLLKQETSSLACGLRILFRMYMDE
SRTGAWDEVQQRLLNVCSEALSYFLTLTSESHREAWTNLLLLFLTKVLKISDERFKAHAS
FYYPLLCEIMQFDLIPELRAVLRRFFLRIGLVFQISQPPEQEPGTNKQ
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaggcaagaagacgaagaacatgttcctgacccgggctctggagaagatcctg
gccgacaaggaggtgaagaaggcacatcactcccagctgcgcaaagcctgtgaggtggcc
ctagaggaaataaaagctgaaacagaaaaacaaagtccccctcatgaagaagcaaagcct
ggttcaagcacacttccaccagtgaaatcaaagacaagctttattgaagccgacaagtac
ttcttaccattcgaattggcatgccagtctaagtgccccaggattgttagtacatccctg
gattgtttacagaaacttatagcatatgggcacttgactggaaatgctccagacagtaca
gctccaggcaaaaaattaatcgatagaattattgagacaatatgtggctgttttcaaggt
cctcaaacagacgaaggggttcagctacaaataataaaggctttactcactgcagtaaca
tctcaacacatagaaattcatgaaggaaccgtgctgcaggctgtaagaacatgttacaat
atctatcttgcaagcaaaaatctcataaatcagaccacagccaaggccactctcacacaa
atgctgaatgttatatttgcacgtatggaaaaccaagcactccaggaagccaaacagatg
gaaaaggaaagacaccgacaacagcaccatctacagcagtcacccttaagccatcatgaa
cctgaatcacctcagctgagacatcttccatcacagacagtcaatcagctaccccaagat
catgaaggagaacttgaccacagcacaaatgatgtggacaagagccttcaagaagataca
gaagcagaaaatggttctgatatttacagtgcagaaaatgaacagacagaagctgaccag
gctgcagcagcagaaaatctgtctaaaagtgatgcgggaacatatgatggagaaaacaat
gaatgtgaagaaaaggcacaagatattgtacagagtattgtgcaggaaatggtgaacata
atagttggagatgtagaagggactgctgaaagtggaagtgctgatggcacaattggaact
ttagaagatggcagtgacagtgaaaatattcaggcaaatggaattccagggactccaatc
tctgttgcatatacaccatctttacctgatgacaggttatctgtctcttccaatgacact
caggaatctggaaattcttcaggacctacgcctggtgctaagttttcccacattttacaa
aaggatgccttcctagtattcaggtcactgtgtaaactctctatgaagccgctgtcagat
gggccaccagatccaaagtctcatgagctgcgatcaaagattctttcattgcagttgctt
ctgtccattctgcagaatgcaggacctgtcttcaggacaaatgagatgtttataaatgct
attaagcagtatctttgtgttgcattatccaagaatggagtttcatctgttccagaagtt
tttgagctttcactttccatattcctcacacttctctcaaacttcaagacacacctaaag
atgcagatcgaggttttcttcaaagaaattttcctatatatcttggaaacctctactagc
tcatttgatcataaatggatggttatacaaacactgacaaggatatgtgcagatgcccag
agtgtagtggatatttatgtaaactatgactgtgacttaaatgcagcaaacatatttgaa
agactggttaatgacctatcaaaaattgctcaaggaaggggtagccaagaacttggcatg
actaatattcaggagttaagtttgagaaagaaaggattggaatgtttagtatcaatcttg
aagtgcatggtagaatggagtaaggatcaatatgttaatcccaattctcagacaaccctt
ggccaagaaaaacctacagagcaggagagtaatgaaaccaaacacacagagacaattaac
agatatggaagcttaaattccctggactctacggcctcatcaggaattggcagttacagc
acacagatgtctggcactgacaacccagagcagtttgaggtcctaaagcaacagaaggaa
ataatagaacaaggaatagatttatttaataagaaaccaaagagaggaatacagtacctg
caagagcaaggaatgcttggcactactcctgaagatattgcccagttcttgcatcaagag
gaaagattagactcgactcaggttggagagttcctgggagacaatgataaatttaacaaa
gaagtcatgtatgcatatgtggaccaacatgacttttcaggaaaggatttcgtatccgct
ctgcgcatgtttttagagggattccgtcttccaggagaggctcagaaaattgatcggcta
atggagaaatttgctgctagatatttagaatgcaaccaagggcaaaccctttttgctagt
gcagacactgcatatgtcttagcttactcaattatcatgttaacgacagatcttcatagc
ccacaggtaaagaacaaaatgaccaaggagcagtatattaagatgaacagaggtatcaat
gacagtaaagaccttcctgaggagtatctgtcagctatctataatgaaatagcagggaag
aagatatctatgaaggaaacaaaagaactagtaatacccacaaaatccagtaaacaaaat
gttgctagcgaaaagcagagacgacttctatataacttggaaatggaacagatggctaaa
acagcaaaagccctcatggaagcagtgagccatgttcaggcaccttttactagtgcaacc
catttggagcatgtgagaccaatgttcaagttggcatggacaccattcctagctgcattc
agtgtgggtctgcaagactgtgatgatacagaagttgcttctctttgcttggaaggcata
agatgtgcaatcaggattgcatgcattttcagcattcagcttgaaagagatgcttatgtc
caagcactagcaagatttaccttgcttacagtgagttctggtataactgaaatgaaacag
aagaacattgacacaataaaaacactcatcacagtggctcatacagatggaaactattta
ggaaattcctggcatgagattctgaaatgtattagtcaacttgagctggcacaattaata
ggaactggagtaaaaccacgttacatctctgggacagtgagaggcagggaaggttctttt
actggaacaaaggatcaggcacctgatgaatttgtgggcctgggattagttggaggaaat
gtggactggaagcagatagcgagtattcaggaatccattggagaaactagttcccaaagt
gttgttgttgctgtagacagaatatttacaggatctacaagactggatggaaatgctatt
gtggattttgttcgttggctttgtgccgtatctatggatgaactgctgtctgctacccat
cctcgaatgtttagtctgcagaagatagtagagatttcttactataacatgggtcggata
agactacagtggtctagaatctgggaagttattggagatcattttaataaggttggctgc
aatccgaatgaagatgtagctatttttgcagtagattccttaaggcagttatcaatgaaa
ttcttagaaaaaggagaacttgctaatttccgattccagaaggatttcttaaggccgttt
gaacacataatgaagagaaacaggtctcctaccattcgagacatggttgtacggtgcata
gcacagatggtaaactctcaagctgccaacattcgctcaggttggaagaatatattttca
gtgtttcatctggctgcatcagatcaggatgaaagtatagtggaacttgcatttcaaact
acagggcacattgtcacaattgtatttgaaaaacacttcccagctaccatagattctttc
caggatgcagtaaaatgtttgtctgaatttgcatgcaatgcagcttttccagacacaagc
atggaagcaatccgcctcattcgccattgtgcaaaatatgtatcagacagacctcaggct
ttcaaggaatacacaagtgatgatatgaatgtagctcctgaagatagggtgtgggtgaga
ggatggttcccaattctctttgagttatcctgtatcatcaatagatgcaaattagatgta
agaaccaggggcttaacagtaatgtttgaaataatgaaaacatatggccatacttatgaa
aaacactggtggcaggatttgtttaggattgtcttcaggatatttgacaacatgaaactg
ccagaacagcagacagagaaagctgaatggatgacaactacttgcaatcatgcactttat
gcaatatgtgatgtattcacccagtatttagaagtacttagtgatgtcctcttggatgat
atatttgcacagctgtactggtgtgtgcagcaagacaatgaacagctagcacgatctggt
accaactgtttggagaatgtcgtcattctaaatggtgaaaagtttaccctagaaatctgg
gataaaacgtgcaactgcatgctggatatcttcaaaaccacaatcccccatgcgctgttg
acttggcgaccgacaggtggagaggctggccctgtatctccatctgctttgagagagaaa
cagctggatacaatatcacagaaatctgtagatattcatgatactgtccagccaagatct
tcagatcgacaccaaattcagcccattgtggggtccacagcaagtgaagagatcagcaaa
accagacctacagcaaaatttccagaacagaagttgtttgctgctctgttaatcaaatgt
gttgtacaactggagcttattcagactatcgacaacattgtgttcttcccagcaaccagc
aaaaaagaagatgcagagaatctagcagcagcacaaagagatgcagtagacttcgatgtt
catgtggacacacaagatcaaggaatgtatcgttttctaacatcgcaacagcttttcaaa
ctgctggactgtttgctggaatctcacagatttgctaaagcttttaattcaaacaatgaa
caaagaactgctctctggaaagcaggttttaaaggcaaatcaaagcccaatcttttgaaa
caggagactagtagcctggcgtgtgggttgcgcattcttttccgcatgtacatggatgaa
agccgcaccggtgcatgggatgaagtccagcaaagactactgaatgtctgcagtgaagct
ctaagttacttccttactcttacatcagaaagtcaccgggaagcctggactaatctacta
ctcttattcttgactaaggtcctcaagataagtgatgaaaggttcaaagctcatgcctca
ttctactaccctctcttgtgtgaaattatgcagtttgacctaattcctgaacttcgagct
gttctgcgaaggtttttcctgcggattggtttagtttttcagatatcccaaccaccagag
caggagcctggaacaaacaagcagtag
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integrated database retrieval system
