Emys orbicularis (European pond turtle): 135873328
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Entry
135873328 CDS
T11511
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03013
Nucleocytoplasmic transport
eob03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135873328 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
135873328 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eob03019
]
135873328 (NUP153)
Messenger RNA biogenesis [BR:
eob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135873328 (NUP153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
135873328
NCBI-ProteinID:
XP_065253815
LinkDB
All DBs
Position
2:complement(113806920..113874143)
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AA seq
1468 aa
AA seq
DB search
MASGGGGGGGGSGGGKIRTRRYHLGASKPYPRNKQRHQGIISRVTESVKNIVPGWLQRYF
NKSEDECVDASEPTSQQETPVNYHHGYADDDTPVFDGRVTPESSRINLEEPSTSRSALNF
SDILTRPSLHRSHLNCTMLDSPSPHCQPSTSSAFAIGSSGLSLVKEIKDSTSQHDDDNIS
TTSGFSSRASDKDIAVSKNTSVPPLWSTEAERSHSLTQHSATSSKKPAFNLSAFGALSPS
LGNASVLKTSQLGDSPFYPGKTTYGGAAAAARQSKIRITPYQTPVRRQMKAKQANVQAYG
VTSSTARRILQSLEKMSSPLADAKRIPSSVASPLSSPVDRSMLDITRFHSKRKQVESLHP
PVQKLVTPKTISQSMSRLQYFKPSLTPAAESGKIRQRVDVKHKGVREKNLTAEQQVEPPE
SNFTYPKFSTPASNGLYSGVGGGGGGKMRRERGVHYVSQPGQEKQEVEAPVLPKIPLPIN
TTSLPNFSFGSLASTTVSSSPITNTQPVINKMQPASNASSPVFRFSSPIVKSTEAEVLPP
LSIGFTFSVPVVKSTQASGSSDTPVPLLISPGTTAVNSTSNKKKEKEEYDGAFKPAKVLK
EGSVLDLLKSPDFTSLKTHTPTATQPVSTSTEVYTRPAISNFSAGSLGFRETSKQASSYW
RCDTCLLQNKGTDNKCITCQAAKVPTADPAKQTGTLTLSSTVKSTAPATGTLGFGDKFKT
AAGTWDCDTCLVQNKPEATKCVACETPKPGTGVKPALTLPVVTENTITVTSSPSCTETTV
TLGFGDKFKKPKGSWDCTVCLVSNKAEDSKCVACQCERPGGSVPVTSSSTSSFSAPSGGF
LGLDKFKKPEGSWDCETCLVQNKAEATKCIACENAKPGTKPELKGFGTAAVSSDAAAPSF
KFGIQSSSSESSQTLESTKSFKFGEQGGLKFGITSESGSVTNNMTGGFNFSKTSGDFKFG
VSSSDSKSEESKKDSKNNNFNFGLPSGTSNPSTSAFQFGTSNLGQQEKKEEPVLGGFSFG
TSSTAPVATLENKTGVSGFSFGTVAEKEVAATPFLFKKSGEKKDETPSAKGGFTFGSMEP
ASASQFVLGRTEEKQDSVTSATSLVFRKTVDNEEPKAQPIFSFGKSEQTKEESTANPPFS
FNLTKPEEKETEQTKPAFTFGAQTNTADQGAAKPAFGFLSSGSSSTAIPSTSANSSSVFG
SSSSASNPPPVAAAFLFGQASNTVSSSAFGNASESNAPQSFGFSQENKPATTSSSTGAAV
GSFLFGSGTGGNNTATPGFNFGATTTSSSTGSSSSFVFGSGSSAPAAGPSQTPAFGASQT
PTFGQSQGASQPNAPTFGSLSSTSLFSAGSQPAPPAFGSVSSSSQPPVFGQQASQQPGFG
SSTTPNSGAVFQFGRSDNFSFTSNSPGVFTFGGNPGAPAPPTQPSGSSGFPFNPTPAFAM
GSNGKNIFSASGSSVSGRKIKTAVRRRK
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggcgggggaggcggtggcggcggcagcggaggggggaagattcggacccgg
cggtaccacctgggcgcctcgaagccttacccgagaaacaagcagcgacatcagggaatc
attagcagagttacagaatcagtgaagaatatcgtaccagggtggttacaaaggtacttc
aataaaagtgaagatgaatgtgtagatgcaagtgaacctacaagccagcaggaaactcca
gtaaactaccatcatggttatgcggatgatgacaccccagtgtttgatgggagggtcact
cctgagtcgtcaagaattaatttagaagaaccgtccacaagtagatctgcattaaacttc
tcagatatattaacaagaccctctcttcatcggagtcatttgaattgcaccatgttggat
tccccatcaccacattgtcagccttccacatcctctgcatttgcaattggcagttctgga
ctctctcttgtaaaagaaatcaaagattctacctctcagcatgatgatgataacatctca
actactagtggcttctcctctagagcatctgataaagatatagcagtttcaaaaaataca
tcagtaccacctctctggtccacagaggctgaacgatctcattctctcacacaacattct
gctaccagctctaaaaaacctgcattcaacttatctgcttttggagccctatccccttca
cttggtaatgcttctgtccttaagacaagccagcttggggattctccattttaccctgga
aaaaccacttatggtggtgcagctgcagcagcaaggcaatctaaaatacgaattactcct
tatcagacaccagtcagaagacaaatgaaagctaaacaagcaaatgtgcaagcctatgga
gtgacaagttccacagcgcggcgcatcttgcaatctctggagaagatgtcaagtccttta
gcagatgctaaaaggattccatcttctgttgcttctccactgtcttctcctgtggacagg
agcatgctggatattactcgctttcattcaaagagaaaacaggtggaatccctgcaccct
ccagtccagaaattagtgacaccgaagacaatttctcagtcaatgagccggttacagtat
tttaaaccatctctgactccagctgctgagtcaggcaagattagacagagagtagacgta
aagcacaaaggagtgagggagaagaatttgactgcagaacagcaagtagagccacctgaa
agcaatttcacataccctaaattcagtacacctgcatccaatggattatattctggagtg
ggaggtggtggcggtggcaagatgagaagggaaagaggagtacactatgtatctcaacca
ggacaagaaaaacaggaggtggaggcaccagtactacccaaaatacccttaccaattaat
actacatcactgcctaacttcagctttggctcccttgccagtactactgtgtcgtcatca
ccaatcactaatacacaaccagtgattaacaagatgcaaccagcaagtaatgctagcagt
cctgtgttcagattttcatctccaattgtaaaatctactgaggcagaagtgctacctcca
ctgtctattgggtttacgtttagtgttcctgttgtgaaatcaacacaagcttctggatcc
agtgatactccagtgccacttctgattagcccaggtaccactgctgtaaatagcaccagc
aataagaagaaagaaaaggaagagtacgatggcgccttcaagcctgcaaaagtcttgaaa
gaagggagtgtactggatcttctaaaaagccctgactttacttctctgaagacacacacc
cctacagccacacagcctgtttcaacaagcacagaagtttatacacggcctgcaataagt
aatttttctgcaggttcattgggatttagagagacctctaaacaagcatcatcatattgg
cgctgtgacacatgtctcttacaaaacaagggaacagacaacaaatgcataacctgtcaa
gctgctaaagtgccgacagcagatcctgctaaacagactggaacgttgactctaagcagc
actgttaaatcaactgctcctgcaacaggaacactgggctttggagacaaatttaaaaca
gcagcaggaacatgggattgtgatacatgtttagtccagaataaacctgaagctacaaaa
tgtgtggcctgtgagacaccaaagcctggaacaggagtaaagcctgctctaacattgcca
gtggtcacagaaaatacaataacagtgacttcctctcctagttgcactgaaactacagtc
actttggggtttggagacaaattcaaaaaaccgaagggttcttgggactgtacagtgtgc
cttgtgtcaaataaggcagaagacagtaaatgtgtagcttgtcaatgtgagagaccaggg
ggttcagtgcctgtgactagtagcagcacatcctctttctccgctccttctggaggattt
ctgggattagacaaattcaagaaacctgagggaagctgggactgtgaaacatgcttggta
caaaacaaagcagaggccacaaagtgcatagcttgtgagaatgcaaaaccaggcaccaag
cctgagctcaaaggttttggtactgctgctgtgtcctcagatgctgctgcaccgtcattt
aaatttggtattcagtcgtcatcctctgagtcatctcagacattagaaagcacaaaaagt
tttaaatttggagaacaagggggtttgaagtttggtattacatcagagtcgggatctgta
acaaacaacatgactgggggcttcaatttctctaaaacttcaggggacttcaaatttgga
gtctcttcctcagactctaaatcagaggagagtaaaaaagacagtaagaataacaatttt
aactttggacttccctctggtacaagcaatccatctacttcagcatttcagtttgggaca
tccaatcttggacagcaggaaaagaaagaggaacctgttttagggggtttcagttttggc
acaagttctactgcccccgtagctacattagagaataaaacaggagtgagtggattcagt
ttcggaacagtggcagaaaaggaagttgcagcaactccttttttatttaaaaagtcaggg
gagaaaaaagatgaaactccttcagccaagggaggcttcacttttggcagcatggagccc
gcatctgcctcacagtttgtcttgggaaggacagaggagaaacaggactctgttacctct
gctacttcattagtgttcaggaagacggttgacaatgaggagccaaaggcgcaacccatc
ttttcatttgggaagtctgagcagaccaaagaagagagcacagcaaaccccccattcagt
ttcaacttaacaaaaccagaagagaaggaaactgagcaaacaaagccagcttttacattt
ggggcacaaaccaatactgcagatcaaggggcagcaaagccagcctttggtttcttgagc
tctggttcctccagcaccgccataccaagcacttcagctaacagtagtagtgtgtttggc
agctcctcctctgcctcaaatcctccaccagttgccgctgcctttttgtttggacaggcc
agcaacactgtgagcagttctgcatttggcaatgcctccgaatccaatgcccctcagtca
tttgggttctctcaagaaaacaaaccagcaaccacatcctccagcacaggtgcagctgtt
ggttcatttctctttggttcaggaacaggcggtaacaatactgcaacccctggtttcaac
tttggggccacaaccacatcaagttctacaggttcttcctcttcatttgtgtttggctct
gggtcttcagcacctgctgctggtcccagccagacaccagcatttggtgccagccagaca
ccaacatttggtcaaagtcaaggtgccagccagccaaatgctccaacttttggatcatta
tcatcaacttcattattttcagctggctctcagcctgcacctccagccttcgggtctgtg
tcaagcagtagtcagcctcctgtgtttggacagcaagcaagccaacagcctggttttggc
tccagtacaacacctaattctggtgctgtattccagttcggacgtagtgataatttcagc
ttcacaagtaatagcccaggagtgtttacttttggtggaaatcctggtgcaccagcgcca
ccaacccagccttctggctcttcaggatttccatttaacccgactccagcatttgcaatg
gggtctaatgggaaaaatattttctctgcttctggatcttcagtttctgggcggaagata
aagactgcagttagacgtagaaaataa
DBGET
integrated database retrieval system
