Emys orbicularis (European pond turtle): 135873468
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Entry
135873468 CDS
T11511
Symbol
TIA1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
eob
Emys orbicularis (European pond turtle)
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eob03019
]
135873468 (TIA1)
03041 Spliceosome [BR:
eob03041
]
135873468 (TIA1)
Messenger RNA biogenesis [BR:
eob03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
135873468 (TIA1)
Spliceosome [BR:
eob03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135873468 (TIA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_10
RRM_ACIN1
Calcipressin
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
135873468
NCBI-ProteinID:
XP_065254049
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All DBs
Position
2:complement(141744262..141767177)
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AA seq
384 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTLRSQDHFHVFVGDLSPEITTE
DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN
WATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQI
MEIRVFPDKGYSFIRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMINPIQQNQIG
YPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQAWNQQGFNQTQSSAAWMGANYGVP
PPQGQNGSVLTNQTGYRMAGFETQ
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaaatgcccaagaccctatatgtagggaacctgtcaagagatgtgactgag
gcactaatcctccagctgttcagccagattggaccatgcaaaaactgcaaaatgatcatg
gatacagctggaaatgatccatactgttttgtggagttttatgagcatcgtcacgcagct
gcagcattagctgctatgaatggacggaagataatgggtaaggaggtcaaagtgaactgg
gcaacaacccccagcagccagaagaaagataccagcagtagtaccgttgtcagcacactg
cgttcacaagaccatttccatgtctttgttggagacctcagtccagaaattacaactgaa
gatataaaagcagcttttgcaccgtttggaagaatatcagatgcacgagtggttaaagat
atggcaacagggaaatctaaaggatatggctttgtttccttcttcaataaatgggatgca
gaaaatgctattcagcagatgggtggacagtggcttggtggaagacaaatcagaactaac
tgggcaacacgaaaacctccagctccaaagagtacatatgaatcaaacaccaagcagctg
tcttatgatgatgttgtaaatcagtcgagcccaagcaactgtactgtatattgtggtggt
gttacttcaggactaacagaacaactaatgcgccagaccttttctccatttgggcagata
atggaaattcgagtcttcccagataaagggtactcttttatacggttcaattctcatgaa
agtgctgcacatgcaattgtttctgtcaatggaactactatagaagggcatgttgtgaaa
tgctattggggcaaagaaacaccagatatgatcaatccaatccagcagaatcaaattgga
tatccacaggcttatggccagtggggccagtggtatggaaatgcacagcaaattggtcag
tacatgcctaatggttggcaagtccctgcatatggaatgtacggacaggcatggaatcag
cagggatttaatcagacacagtcttctgccgcatggatgggtgcaaattacggagttcca
ccacctcaggggcagaatggaagtgtgttaactaatcaaactggatatcgcatggcaggt
ttcgaaactcagtga
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