Emys orbicularis (European pond turtle): 135873570
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Entry
135873570 CDS
T11511
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
eob Emys orbicularis (European pond turtle)
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eob04131
]
135873570 (VPS50)
Membrane trafficking [BR:
eob04131
]
Protein recycling
Others
EARP complex
135873570 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
135873570
NCBI-ProteinID:
XP_065254252
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Position
2:complement(252108380..252286936)
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AA seq
986 aa
AA seq
DB search
MQKIKSLMTRQGLKSPQENVHDLSPVENFRIPSKEELRELREQPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELEKLPPVLSLQEVEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNS
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDRDEGTVSSSV
SDGNNVIGAEETNFDRSYVQKKLEHGLSRIWQDVQLKVKTYLLGTDMSIFKYDDFIFVLD
IISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQSASAISTTITLFEQYCNEGNPFEIQVNSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLRSRKRSDY
NLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTPVQSSSLPTSSREQYSARQFESTGLGLSSSRLRTTLNRIQESLIDLEVSTDTTGTLTA
AEERKEKVPSPHLSHLVVLTSGNTLYGLAERVVATESLVFLAEQFEFLQSHLDAVMPAAK
KPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNVYVDA
LLKEFEQFNGRLNEVSKRVRIPLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQ
LDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNV
CLGSHINKKARQKLLAAIDDLDRPKR
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtcactgatgactcgccagggtctcaaaagtccacaggagaacgtt
catgacctcagtcctgttgagaattttcggattcctagcaaggaggagctgagagaactc
cgggaacaaccaaccgatcctcaagcccagcaagaaataattaacagcattgaagaagtg
tatttttccaatgattcctttgatattgtgaagtatgagttggagaagcttcctccagtt
cttagtcttcaagaagtggaagaatacagagacaaattaaagcaacaacaagctgctgta
tctaaaaaggttgcagacttgattcttgaaaagcagcctgcatatgttaaggaacttgaa
cgagttacatctttacaaactggtcttcagttagctgcagtcatttgcacaaatggaaga
agacacctgaatattgcaaaggaaggctttactcaagctagtttgggacttcttgcaaat
caaagaaaacgacagttgctgattggcctgctaaagtctctgagaacaataaaaacactg
caaagaactgatgtacgtttaagtgaaatgttggaggaggaggactatccaggagctatt
caattgtgcttggaatgccagaaagcagccagtactttcaaacactacagttgtataagt
gaattgaattcaaaactgcaagacactttggaacaaatagaggaacaattagatgtagcc
ctctccaaaatatgcaagaactttgatatcaatcattataccaaggtgcagcaggcttac
agactacttggaaagacacagacagcgatggaccaactacatatgcacttcactcaagcc
attcacaacacagtgtttcaagtagttcttgggtacgtagagctgtgcgcaggaaactcg
gacaccaaatttcagaagctacagtacaaggacctctgcacacatattacatcagacagc
tacattccatgtcttgctgacctctgcaaagcactctgggaagtcatgctcagttattat
cgaacaatggaatggcatgagaaacatgaccgagatgagggaactgtttcatcttctgtt
tcagatggcaacaatgtgattggagctgaggagaccaattttgaccgtagctatgtacaa
aagaaattagaacatggactttcacgaatatggcaggatgtgcagctgaaagtgaaaaca
tatctgctgggaacagacatgtctatcttcaaatatgatgactttatctttgtactagat
atcattagcaggctgatgcaagttggggaagaattttgtggcagtaagtcagaagttttg
caagaatccatcagaaaacaaagtgttaactatttcaagaattatcacagaactcgtctt
gaagaattgcgaatgttcttggagaacgagacctgggagctttgtcctgttaagtcaagc
tttagtattttacaacttcatgagtttaaattcatggagcagtcacgttccccgtctgtg
tcgcctagtaagcagtctgcttcagcaatctcaacaaccataactttgtttgagcaatat
tgtaatgaaggaaatccatttgaaattcaggtcaacagcaaagatgatgagacagaagat
gtacttgcttctaatgggtatgaatctgatgaacaggagaagagtgcctatcaagagtat
gacagtgacagtgatgttcctgaggagctgaaaagagattatgtggatgagcagacagga
gatgcccctgtaaaaagtgtttctcgagaaaccctgaggagcaggaagcgatcagattat
aatctcaacaaggtgaatgcacccatcctaacaaacactacactgaatgtaataagactc
gttgggaaatacatgcagatgatgaacattctgaaaccaattgcatttgatgtgattcac
ttcatgtcccagctgtttgattactatctgtatgcagtgtatacgttttttggccgaaat
gacacgcctgtacagagttcttcacttcccacatctagcagggaacagtacagtgctagg
cagtttgaatcaacaggactgggtcttagtagtagcaggctgcgcactacgctaaacagg
atacaggagagcctgattgatctggaggtctctactgataccactggcaccctcacagct
gctgaagagagaaaggagaaagtgccaagtccacacctcagtcatctggtagttttaaca
tctggcaatactctgtatggtttggcagagagagtggtagccacagaatccttggtgttt
ttggctgagcagtttgagttccttcagtcccatcttgatgctgtgatgcctgcggccaag
aaaccctttctccagcaattctactctcagactgtgtcaactgccagtgaactacgcaaa
ccaatttattggattgtagctgctaaagctattgattatgaacagatgctgctcctcatg
gctaatgtgaagtgggatgtgaaagagatcatgtcacaacacaatgtctatgttgatgct
cttttaaaggaatttgaacagtttaacggaaggttgaatgaggtgtctaaaagagtccgt
attccattgccagtgtcaaatattctttgggagcattgtatacgactagccaatagaact
attgtggaaggttatgccaatgtcaagaagtgtagcaatgaagggcgtgccctgatgcaa
ttggacttccagcagtttttaatgaaactagaaaagctaacagacattaggcctattccg
gataaggaattcgtggagacctacattaaagcttactatctgactgaaaatgacatggag
cgctggatcaaggagcacagggaatattccaccaagcagttgaccaatctggtgaatgtt
tgtctgggatcacacatcaacaaaaaagcaagacagaaactgctagcagcaattgatgac
ctagacagacctaaaagataa
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