Emys orbicularis (European pond turtle): 135873573
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Entry
135873573 CDS
T11511
Name
(RefSeq) sodium channel protein type 5 subunit alpha-like isoform X1
KO
K04838
voltage-gated sodium channel type V alpha
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob04261
Adrenergic signaling in cardiomyocytes
eob04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
135873573
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
135873573
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
eob04040
]
135873573
Ion channels [BR:
eob04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
135873573
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
CcmD_alt
Lustrin_cystein
IQ
Motif
Other DBs
NCBI-GeneID:
135873573
NCBI-ProteinID:
XP_065254257
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All DBs
Position
2:complement(284684031..284946079)
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AA seq
2041 aa
AA seq
DB search
MADFLLQPGSNSFHRFTLESLAAIEKRIAEKLARNAKQEYRDQPDDEEKPRPQFDLQACK
KLPGIYGTLPPELIGEPLEDLDPYYSDHKTFIVLNKGKTIFRFSATPALYILSPFHPVRR
AAIKILVHSLFSMFIMCTILTNCVFMAQSEVQSWNKYVEYTFTGIYTFESLIKILARGFC
MTEFTFLRDPWNWLDFSVIVMAYITEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGA
LIQSVKKLADVMILTVFCLSVFALIGLQLFMGNLRHKCVRNYTEFNSTNGTFYSGVQKWN
SLDDFLNDPENYFIKNGTSDALLCGNSSDAGTCPTGYRCLKAGENPDHGYTSFDTFGWAF
LSLFRLMTQDCWERLYQQTLRSAGKIYMLFFMLVIFLGSFYLINLILAVVAMAYEEQNQA
TIAETEAKERKFREAMEMLKKEQEALAARGIDSMSLSSFEMSPLASKNAKERRNRRTKKR
SLGVEDYGEDQKVPKSEYDCGQRRMTLLDISYGPNANSVKRRTSHGSIFSFRFRGRDIGS
ETDFADDEISTAGENESQRGSLLIPRTGRRSSMQSQASHSSHPPTPNYMQNGKRNSSVDC
NGVVSLIGGGTGAHNPDATSPSGLLLPPVIMENPGTGDVTSPSDEASKKQLLMPHRLSVD
HCDLPFQRQRAVSAVSIITSAMEELEESQQRCPPCWNHFAVKFLIWDCSPLWLLIKKHVK
FVVMDPFTDLTITLCIVMNTLFMALEHYKMTKEFDNMLYIGNLVFTGIFTAEMIFKIIAL
DPYYYFQQGWNIFDSIIVILSLMELGLSSMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKI
IGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKDYLIKVSKISPNNNLPRWHMNDFFHSFL
IIFRILCGEWIETMWDCMEVAGQPLCLLVFLLVMVIGNLVVLNLFLALLLSSFCADNLSA
PDEDGEMNNLQLAFARINRGLQYVKNTTWDFCCNLLRHPKTTAEKKAMIKLAAQNTGVLH
NYVNSHTTAEIGKDVENHKENHVDDGTDKNGQKLPVISDNDDFLTNPDLSICVPIAVGES
DIEDQEDDEEQSTFTEMEQQEKQLPLKGQQCKSPGVRSQTSEICEELSELYVDKQLKAEL
PPPPPPPPPLLLGQKELDEISLSEGSTVDLGNSAELLEQIPELADDLMEPENCFPEVCVR
FFPCCSVDTTTFSGKIWWRLRKTCYRIVEHNWFETFIIFMILLSSGTLAFEDIYLEERKN
IKTLLEYADKIFTYIFVLEMLLKWVAYGFKKYFTNAWCWLDFLIVDISVVCLIATTLDYD
QLGAMKSLRTLRALRPLRALSRFESIRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVN
LFAGKFGKCINKTAGDMPLDSKVINNMSECILYNVTGNFYWTKVKVNFDNVGAGYLALLQ
VATFKGWMDIMYAAVDSRGCEDQPEWEYNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFN
QQKKKISGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFIFDVVTKQAFDVSI
MILICLNMVTMMVETDDQSLEKVNILHKINMLFVAIFTAECSIKMLALRHYYFTNGWNIF
DFVVVILSIVGTVLSDIIQQYFFSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSL
PALFNIGLLLFLVMFIYAIFGMANFAYVKKENGIDDMFNFQTFANSMLCLFQITTSAGWD
GLLNPILNTGPPYCDPNLKNANGSKGDCGSPAVGILFFVTYIIISFLIVVNMYIAIILEN
FSVATEESTEPLSEDDFDMFYEIWERFDPEATQFIEYSVLSDFADALAEPLRIAKPNKIK
LIAMDLPMVSGDRIHCLDILFAFTKRVLGETGEMDALKIQMEEKFMAANPSKISYEPITT
TLRRKQEEVSAIIIQRAYRSHLFQRSLKQASFLYRHQACDGNMLEDEAPEKDGLIAFMMN
ENYGRPIDKSETVSSTSFPPSYDSVTRATSDNLQLKVTDSSKSDEPVYYLLSPDRDKESI
V
NT seq
6126 nt
NT seq
+upstream
nt +downstream
nt
atggccgacttcttgttacaaccgggttctaatagcttccaccggttcacgcttgaatcc
ttggctgctattgagaagcgaattgcagagaaacttgcaaggaatgccaagcaggagtac
agagatcagccagatgatgaagaaaagcctcggcctcagtttgacttacaagcttgcaaa
aagttgcctggtatctatgggactcttcctccagagctcattggggaaccactggaggat
ctcgacccttactacagtgaccacaagacatttatagtactgaacaaagggaagacaatc
tttcgatttagtgccactcctgccttgtatatacttagtcctttccatccagtccgaaga
gcagcaattaaaattttggtacattcattgttcagtatgtttattatgtgcactatttta
accaactgtgtgttcatggcacaatcggaggttcaatcatggaataaatatgttgagtac
actttcactggcatttacacttttgaatcattgataaaaatactggcaagaggattttgt
atgacagaattcaccttccttcgagatccatggaattggctggatttcagtgtcattgtt
atggcatacataactgaatttgtggacctgggcaatgtctcagccttacgaacgttcaga
gttcttcgggcgctgaaaacaatctcagtcatttcaggattgaagaccatcgtaggtgca
cttatccagtctgttaagaaacttgctgatgtgatgatcctgaccgttttctgcttgagt
gtctttgcccttataggcctccagctctttatgggcaatttgagacataagtgtgtcagg
aactacaccgaatttaactctaccaatggcacattttattcaggcgttcagaagtggaat
tccttggatgattttcttaatgatccagaaaactacttcataaaaaatggcacttcggac
gcactactctgtggcaacagctcagacgctggcacctgtccaacgggatatagatgccta
aaggctggtgaaaatcctgatcatggctatacaagctttgatacttttggctgggccttt
ctctctttgttccgcctgatgacacaggattgctgggagcgtctctatcaacagactctg
agatctgctgggaagatctacatgctcttttttatgctggtcatctttctgggctcattt
tatctgatcaacttgatcctggctgtagtagccatggcttatgaagagcagaaccaagcc
actattgctgaaacagaggcaaaggaaaggaagtttcgggaagccatggaaatgttaaag
aaagagcaggaggcactggctgctagaggaattgattcaatgtcacttagctcatttgaa
atgtcacctttagcatccaaaaatgccaaagagagaagaaataggagaacgaaaaagagg
tccttgggggtagaagattatggggaagaccaaaaggttcccaaatctgagtatgattgt
ggtcagcgaagaatgactctccttgacattagctatggtccaaatgcaaactcagtgaag
cgcagaaccagccatggaagtatattcagtttccgattccgtggcagagacattggctcc
gaaacagattttgccgacgatgagatcagcactgccggggaaaatgaaagccagcgtggc
tcactcttaattccaaggactgggagacgttcaagcatgcaaagtcaagcaagccatagc
tctcaccctcctactccaaactacatgcagaatggcaagaggaacagctcagtggattgc
aatggtgtggtttccttgataggaggaggcaccggggctcacaacccagatgcaacgtct
ccttcagggttactgctgcccccagttattatggaaaaccctgggacaggcgacgtgacc
tctccatctgatgaggcaagcaaaaagcagcttttgatgccccatcgcctttcagtggac
cattgtgacctgccatttcaaagacaacgagcagtgagtgcagtcagtatcattaccagt
gccatggaagagcttgaggaatcacaacagcgatgtcctccatgctggaatcattttgcc
gttaaatttctcatttgggattgctctccattgtggttgttaatcaagaaacatgtgaag
tttgtggtaatggatccatttactgacctcacgatcaccctttgcattgtgatgaatact
ctcttcatggcattggagcattacaagatgacgaaggagtttgataacatgctttacata
ggcaatctggtcttcactgggatttttacagcagaaatgatcttcaaaataattgcctta
gatccctactactattttcagcagggctggaatatttttgacagtataattgttatccta
agcctaatggaactgggtttatccagcatgggaaatctgtctgttttacgctcattcaga
ttgctgagagtcttcaaattggcaaagtcctggccaaccttaaatactctcattaaaatc
attggtaactcagtgggtgccctgggtaacctcaccctggttctggcgatcatagtcttt
attttcgctgtggtaggaatgcagctttttggaaaagactacttaataaaagtcagcaag
ataagccctaataacaatttgccccgctggcacatgaacgatttcttccattcattcctt
attatattccgaattctctgtggagaatggattgaaaccatgtgggattgtatggaagta
gctggacaaccattgtgccttctcgtcttcttgctggtcatggtgataggaaacctagtg
gtgctcaacctgttccttgccttgctactgagttctttttgtgctgacaacctttcagca
ccggatgaagatggagagatgaacaatctacagctcgcttttgctcggatcaacaggggg
cttcagtatgtgaaaaacacaacatgggatttctgttgtaatttacttaggcatccgaag
acgacagctgaaaagaaggcaatgattaaacttgctgcccagaacacaggtgtccttcac
aactatgtgaatagccataccactgcagagattggtaaagatgtggagaaccacaaagag
aaccatgttgatgatgggactgacaaaaatgggcagaaactcccagtgattagtgacaat
gatgattttctgaccaaccctgacctgtccatctgtgttcccattgctgtgggggagtct
gatattgaagatcaagaagatgatgaggagcagagcacattcacagaaatggaacagcag
gaaaaacagctgccactaaaggggcagcaatgcaaaagcccaggagtccggagtcagacc
tctgagatttgtgaagagttaagtgagttgtacgtggataagcaattgaaggctgagctg
ccaccaccaccaccaccaccgccaccactactactagggcaaaaagagcttgatgaaatc
agtctctctgaaggcagcacagtggatttgggaaattctgcagagctactggaacagatc
cctgagctggctgatgatttaatggaacctgagaactgttttccagaagtctgtgtccga
ttcttcccttgctgttcagtggacaccacaacattttcaggcaaaatttggtggaggctg
aggaaaacctgctacagaatagttgaacacaactggttcgaaactttcatcatattcatg
atcctgctgagcagcggcacgctggcatttgaagatatttaccttgaagagagaaaaaac
attaaaaccctgttggaatatgctgacaaaattttcacttacatctttgtcctggagatg
cttctgaaatgggtggcttatggcttcaagaaatatttcaccaatgcctggtgttggctt
gacttcctaattgtagatatttcagttgtttgcctgatagcaacaactcttgactatgac
cagctgggcgctatgaaatctctcagaacactgagggcattgcggcccctccgagcccta
tccagatttgagagcataagggtggttgtgaatgccctgttaggcgccatcccttccatc
atgaacgttctgctcgtctgcctcattttctggctcatttttagcatcatgggagtgaac
ctgtttgcaggaaagtttggaaaatgcattaacaagacagcaggagatatgcctttagac
tctaaagttattaataacatgagcgagtgcatactctataacgtgacaggcaatttttac
tggacaaaagttaaagtcaactttgataacgttggtgctggttacctggctcttctacag
gtggcaacatttaaaggttggatggacattatgtatgcagcagtagattcacgagggtgt
gaggatcaacctgaatgggaatataatttatacatgtacctctactttgtgattttcatc
atcttcgggtctttcttcacattgaatctcttcataggcgtcattattgacaattttaac
caacaaaagaaaaagataagtgggcaagacatctttatgacagaggaacagaaaaagtat
tataatgcaatgaaaaaactgggctccaagaaaccccaaaaacccatcccaaggccactg
aacaaataccaaggttttatctttgacgtagtcaccaaacaagcctttgatgtctccatc
atgattctcatctgccttaacatggtcaccatgatggtggaaacagatgaccagagtcta
gaaaaagtgaacatccttcataaaatcaacatgctcttcgttgccatcttcacagcagag
tgcagcatcaaaatgttggctttaagacactactatttcaccaatggctggaacatattt
gattttgttgttgtgattctatccattgtgggtaccgtgctttctgacatcattcaacaa
tattttttctctcctacactcttcagagtcattcgcttggctcggattggcagggtccta
agacttatacggggagccaaaggaattagaactctcctttttgccttaatgatgtccctt
cctgctctgttcaacattggtctccttctttttctggtcatgtttatttatgccattttt
ggaatggctaattttgcctatgttaaaaaagagaatgggattgatgacatgttcaacttc
caaaccttcgctaacagcatgctctgtcttttccaaattacaacctcagctggctgggat
ggtcttctcaatcctattttaaacactggaccgccatattgtgatccgaacctaaaaaat
gcaaatggttcgaagggagactgtggaagccctgctgtagggattctattctttgttact
tatatcattatatcatttctcattgttgtaaacatgtacatagccattattttagagaac
ttcagcgtagccactgaggaaagtacagagcctctaagcgaagatgactttgatatgttt
tatgaaatctgggagaggtttgatcctgaagcgactcaatttattgagtattctgtgctt
tcagactttgcggatgctctggcagaacctttacgcatagcaaaaccaaacaaaattaaa
ctcatagccatggaccttcccatggtcagcggagataggatccactgcttggatatttta
tttgcttttaccaaacgggtactaggagaaacgggggaaatggatgcccttaaaatacag
atggaggaaaagtttatggctgccaatccatctaaaatttcttatgaaccaatcacaacc
acactcagacggaaacaagaggaggtttctgccattatcatccagagggcctacaggagt
catttgtttcaacgctccttgaagcaggcctctttcttataccgtcatcaggcttgtgat
ggcaacatgcttgaagatgaggcacctgagaaagacggtctcattgcattcatgatgaat
gaaaattatggtaggccaatagacaaatcagaaactgtgtcctcaacatctttccctcca
tcctatgacagtgtcaccagagccactagtgacaacctccagctaaaggtgacagactct
agcaaaagtgatgaacctgtatattatctgctatctccagacagagataaagaatcaatt
gtctaa
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