Emys orbicularis (European pond turtle): 135873932
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Entry
135873932 CDS
T11511
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03250
Viral life cycle - HIV-1
eob03272
Virion - Hepatitis viruses
eob04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
135873932 (PDCD6IP)
03272 Virion - Hepatitis viruses
135873932 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135873932 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eob04131
]
135873932 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eob04147
]
135873932 (PDCD6IP)
Membrane trafficking [BR:
eob04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
135873932 (PDCD6IP)
Exosome [BR:
eob04147
]
Exosomal proteins
Proteins found in most exosomes
135873932 (PDCD6IP)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Ly49
Motif
Other DBs
NCBI-GeneID:
135873932
NCBI-ProteinID:
XP_065254626
LinkDB
All DBs
Position
2:complement(210540257..210592391)
Genome browser
AA seq
871 aa
AA seq
DB search
MATFISVQSKKASEVDLAKPLCKFIQQTYPAGEAQSDHCRAAEELNKLRKSAVGRPLDKH
ESSLETLMRYYDQLCSIEPKFPFSENQICVTFTWKDAFDKGSLFGGSVKLALASLGYEKT
CVLFNCGALASQIASEQNLDNDEGLKTAAKHYQFASGAFQHIKDTVLSALNREPTVDISP
DTVGTLSLIMLAQAQEVFFLKATRDKMKDAIIAKLANQAADYYGDAFKQCQYKDTLPKYF
YFQEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIGRLQHASDLVKTVASRYDEYVN
VKDLSDKINRALTAAKKDNDFIYHDRVPDLKDLDPIGKASLVKSTSVVVPISQKFTDLFE
KMVPLAVQQSLSLYNQRKADLVNRSIAQMREATNLANGVLASLNLPAAIEDVSGDSVPQS
ILQKSKSVIEQGGIQTIDQLIKDLPELLQRNREILDESLRLLSEEEATDNDLRAKFKERW
QRTPSSELYKPLRAEGANVSNILDKAIQADGHVKERYQTHRDTISLLCKPEPELNAAIPS
ANPAKTMQGSEVVSVLRSLLASLDEVKKEREQLENDLKSVNFDMTSKFLTALAQDGAINE
EAISVTELDRIYGSLTHKVQETLKKQDELLKNIQNAHQEFSKMKQSNSESNLREEVLKNL
AVANDNFVELVANLKEGTKFYNELTEILLKFQNKCSDIVFARKTERDELLKDLQQSIARE
PSAPSIPSQPAYQTAAAGGSKPAASTTPTPAPRTMVSSKPQPPARPPPPVISTANTPVST
ATGATASPAPLPGSSAASTAPSQAQGPPYPTYPGYPGYCQMPMPMGYNPYTYGQYNLPYA
PQMYQNPGQAPYPGPQQPGYPYPQQPYYPQQ
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttttatttcggtgcagtcgaagaaggcctccgaggtggacttggccaagccg
ctctgcaagttcatccagcagacgtacccggccggggaggcgcagagcgatcactgccgc
gcggccgaggagctcaacaagctgcgcaaaagcgcggtcggccgcccactcgacaagcac
gagagctcgctcgagacgctgatgagatactacgatcagctgtgttccatagagccaaaa
tttccattttctgaaaaccagatctgtgtgacctttacatggaaagatgcctttgataaa
gggtcgctttttggaggatctgtcaaacttgctctggcaagtttgggatatgagaagacc
tgcgttttgttcaactgtggtgcattagctagtcagattgcatcagagcagaatctggat
aatgatgaaggattgaaaactgctgctaaacattatcagtttgctagtggtgccttccaa
cacattaaagacacagtcttgtctgcgttgaatagagagcctacagtggacatctctcca
gatacagttggaacccttagtcttattatgttggctcaagctcaagaggtgtttttctta
aaagcgacaagagataaaatgaaagatgctatcatagctaaactggctaatcaagctgca
gattattatggtgatgctttcaaacaatgtcaatataaggacactttgcccaagtatttt
tatttccaggaggtgtttcctgttctggctgcgaagcactgcattatgcaggccaatgca
gagtatcaccagtctatcctggcaaagcagcagaagaaatttggcgaagaaatcgggaga
ctacagcatgcatcagacttggtaaaaacagtggcatctcgttatgatgaatacgtaaat
gtaaaagatttgtctgacaaaatcaaccgcgcccttacagctgccaagaaggacaatgac
ttcatttatcatgaccgggttcctgacttgaaagatctagatcccattggcaaagccagt
cttgtgaaatctacctcagttgttgtccctatcagccagaagttcactgatctctttgag
aagatggttcctctggcagtgcagcagtctctgagcctctacaaccagagaaaggcagac
ttggtaaatagatcaatagcccagatgagagaagccaccaatctggcaaatggagtattg
gcttctctcaacctgcctgctgccattgaagatgtgtctggtgatagtgttcctcagtct
attctgcagaagtctaagtctgttattgaacagggaggcatccagaccattgatcagctc
atcaaagatctaccagaactgctacagagaaacagagagatcttagatgaatcactaaga
ttattgagtgaagaggaagccacagacaatgatctaagagcaaaattcaaagagcgttgg
caaagaacaccatccagtgaactctacaaacctttgagggcagagggagccaatgtcagt
aatattttggataaagctatacaggcagatggacacgttaaagagcgctatcagactcat
cgggatacaatttcacttctgtgtaaaccagagccagaattgaatgcagccattccttct
gccaatccagcaaaaaccatgcagggaagtgaggttgttagtgtcttaagatctctacta
gctagcctggatgaggtgaagaaggagagagaacaacttgagaatgacctaaaatctgta
aattttgacatgaccagcaaatttctgactgcacttgcacaggatggtgctataaatgaa
gaagccatctctgtcactgaattggaccggatatatggaagtttaacacacaaggtgcaa
gagaccctgaaaaagcaggatgaacttctcaaaaacattcagaatgcacatcaggaattt
tcaaagatgaaacaatcaaacagtgaatctaatttaagagaagaagttctgaagaattta
gctgtagcaaatgacaactttgtggaacttgtagccaatttaaaagaaggcacaaagttt
tacaatgaattgacagaaatcttgctgaaattccaaaacaaatgcagtgacatcgttttt
gcccgtaagactgaaagagatgaacttctaaaagacttacaacaaagcattgctagagaa
cccagtgctccctctattccttcacagcctgcataccaaaccgcagcagctggaggaagt
aaacctgctgcatcaactactccaactccagcacccagaaccatggtgtctagtaaacca
caaccaccagcacgccctccaccaccagtgatttctacagcaaatactcctgtatcgaca
gccactggagctactgcttctccagctcctctacctggttcatctgcagcgagcactgca
ccatcacaggcacagggaccaccttacccaacctatccaggatacccagggtattgccag
atgccaatgccaatgggctacaatccttacacctatggccagtataatctgccatatgca
ccacaaatgtatcaaaatcctggacaagcaccatacccaggacctcaacaacctggatac
ccttaccctcaacagccttattacccacagcagtaa
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integrated database retrieval system
