Emys orbicularis (European pond turtle): 135874013
Help
Entry
135874013 CDS
T11511
Symbol
TRAPPC8
Name
(RefSeq) trafficking protein particle complex subunit 8
KO
K20305
trafficking protein particle complex subunit 8
Organism
eob Emys orbicularis (European pond turtle)
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eob04131
]
135874013 (TRAPPC8)
Membrane trafficking [BR:
eob04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
135874013 (TRAPPC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_3rd
Ig_TPPC8_2nd
Ig_TPPC8_C
SNAP
Motif
Other DBs
NCBI-GeneID:
135874013
NCBI-ProteinID:
XP_065254761
LinkDB
All DBs
Position
2:77130059..77238761
Genome browser
AA seq
1428 aa
AA seq
DB search
MAQCVQSVQEFIQDSFVPLVAALCSEEAERLTRKNNLGFSELVKPFCRLTSEVHMRDPNN
QLHVIKNLKIAVNNIITHSPQPGGIRKLLNDVVSVSQPAEGLVTNVITAGDYDLNISATT
PWFESYRESFLQSMPASDHEFLNHYVACMLVVSSGEPEPVEQFLKLSQEQHRIQHSSEYA
YPKWFIPNTLKYYVLLHDVSAGEEQRADSVYEEMKQRYGTQGCYLLKINSRGSNRGADEQ
IPDPWSQYLQKNSIQNQESYDDGPYTVISNKNADHLISDGLDNDIQDGLSNNFKAHPLQL
DHLSDTSSSFDGTDYIKTTSSLHESKKTSSGMPHGACLTLTDHDRIRQFIQEFTFRGLLP
HIEKTIRQLNDQLISRKGLSRSLFSATKKWFSGSKVPEKSINELKNTSGLLYPPEAPELQ
IRKMADLCFLVQHYELAYSCYHTAKKDFLNDQAMLYAAGALEMAAVSAFLQPGAPRPYPA
HYMDTAIQTYRDICKNMVLAERCVLLSAEILKSQSKYSDAAALLIRLTSEDSDLRSALLL
EQAAHCFINMKSPMVRKFAFHMILAGHRYSKAGQKKHALRCYCQAMQVYKGKGWSLAEDH
INFTIGRQSFTLRQLDNAVSAFRHILINDSKQPAAQQGTFLREYLYVYKNVTQLSPDGPL
PQLPLPYINNSATRVFFGHDRRPAEGEKQAATHISLDQEYDCESSHQWKELEEQVVAVVN
KGIIPSNFQPTQYCLNSYSDNSKFPLAVVEEPVTVEVAFRNPLKVPLLLTDLSLLWKFQP
KDFSAKHNGATKELACGNDMIGAEVIAEFLINSEETKMARLKLFPHQTGELHILGVVYNL
GTIQGTMMLDGIDPSIGLQAGKLVYNGMSVRGRQDLEIQGPRLNNTKEEKTSIKYGPDRR
LDPIITEEMPLLEVFFINFPTGLLCGEIRKAYVEFVNVSKCPLTALKVVSKHPEFFTFGG
NTAVLTPLSPSASENCSAYKTVVTDSTSVCTALMSSASSVNFGLGTGSQPEVIHVPLPDS
VLLPGASIQLPMWLHGPDEEGVHEINFLFYYESIKKHSKMCHRVLRHTAVICTSRSLNVR
ATVCRSNALEDEGRGDNMLVFVDVENINTSEAGVKEFHIVQVSSNSKHWKLQKAVNLSED
KDYKLASRERGKLCFKAVRCKNSGENYTFADIVFGNEQIISSASPCADFFFRSLSSKLKR
THAQSNMFQGAAKQSFDEAVRLIQKCSEVDLNIVVLWKAYVVEDNKQLILEGQHHVVLHT
VGKEAFSFPQKQESPEMVLLKFFRPENTSLPTRPTPEQLSNLIKTSLHYPESFNHSFHQK
SLCLVPVTLLLSNCSEADVDVIIDLRHKTTSPEALEIHGSFTWLGQTQYKLQLKSQEVYS
LQLKACFVRTGVYNLGTHRVFAKLADQVTLFETSQQNSMPALIIISNI
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgcgtgcagtcggtgcaggagttcatccaggactcgtttgtgcccttggtg
gccgcgctgtgcagcgaggaggcggagagactcacccgcaagaacaacctgggcttctcc
gagctggtgaagcccttctgccgcctcacctcggaagttcacatgagagatcctaacaac
cagcttcacgtaattaaaaacttgaaaattgctgtcaacaacattattacccactcacct
cagccaggaggcattcggaaacttctaaatgatgttgtatctgtcagtcaaccggctgaa
ggattagtaactaatgtgattactgcaggagattatgatctcaacattagtgctactact
ccatggtttgagtcttacagagagagctttcttcagtccatgcctgcatcagatcatgaa
ttcctaaaccactatgtcgcatgtatgcttgtagtttcttctggtgagcctgaacctgtg
gagcaatttctgaagctgtcacaagagcagcatagaattcagcacagcagtgaatatgca
tatccaaaatggtttataccaaacacactcaaatattatgtattgctacatgatgtaagt
gcaggagaggaacaaagagctgactcagtatatgaagaaatgaaacagagatatggaact
cagggttgctatttacttaaaataaattctcgaggatctaacaggggagcagatgaacaa
ataccagatccttggagtcagtatctccagaaaaacagtatccaaaaccaggaatcttat
gatgatggtccatatactgtaatttcaaataagaatgctgaccacttaatatcagatggc
ttagataatgacatccaagatggtttatcaaataactttaaggctcaccctcttcagctg
gatcatctcagtgatactagtagcagttttgatggcactgattacataaagactacttca
tcactgcatgaatcaaagaagacaagttctgggatgcctcatggtgcatgtttaacgctc
acagatcatgatcgaattagacaattcatacaggagttcacatttagggggcttttgccg
catatagagaaaacaattcgacagcttaatgatcagttaatatccaggaaaggtttgagt
cgatcactattttctgcaacaaaaaaatggtttagtggcagtaaagttccagagaaaagc
ataaatgagctgaaaaatacatctggcttgttgtatcccccagaagcaccagagcttcaa
atcaggaaaatggcagatttgtgtttcttggtccaacactatgaactggcgtatagctgc
tatcatacagcaaagaaagactttttgaatgatcaagcaatgctttatgcagctggagca
ctggaaatggcagcagtatcagcttttcttcagcctggggcgcctagaccgtaccctgct
cattatatggatacagcaattcaaacatatagggatatctgcaagaacatggtgctggct
gagagatgtgtgctgcttagtgctgaaattttaaaaagccagagcaaatattcagacgct
gctgctcttctgatacgtttaaccagtgaggattctgaccttcgcagtgcccttctgttg
gagcaggctgcacattgctttataaacatgaaaagtccgatggttagaaagtttgccttt
catatgatattggctggccataggtatagcaaagcaggacagaagaaacatgccttgcgt
tgttattgtcaagccatgcaagtttacaaagggaaaggttggtctcttgcagaggatcat
attaacttcacaattggtcgtcagtcttttacacttcgtcagcttgataatgctgtgtct
gccttccggcatattttgatcaatgacagcaaacaacctgctgctcaacaagggaccttc
ctcagagaatacctttatgtttacaagaatgtaactcagctatcacctgatggcccttta
ccacaacttcctttaccatatattaacaattctgcaacacgagtattctttggacatgat
agacgaccagcagaaggtgaaaagcaggcagccacacatataagtcttgatcaggaatat
gattgtgaatcttctcaccaatggaaggagcttgaagaacaggttgtggctgtggttaac
aaaggaataataccttcaaactttcaaccgacgcagtattgtttgaacagctattcagat
aactccaagtttccacttgctgtagtagaagaaccagtaacagtggaagtagcctttaga
aacccattgaaggttccacttttgttgactgatttatcgttgctttggaaattccaacct
aaagatttcagtgcaaagcataatggagcaacaaaagagttggcatgtggaaatgacatg
ataggagctgaagtaatagcagagttcttaattaatagcgaagagacaaaaatggcaaga
ctaaagctctttccccatcaaacaggggagctacatattctgggagtcgtttacaatctt
ggcactattcagggtactatgatgttagatgggattgatccttctattggattgcaagca
ggaaaattggtctataatgggatgtctgtacgaggacgacaggacttagaaattcagggc
cctcgacttaataatacaaaagaagaaaaaacatccattaaatatggaccagatcgacgt
ttagatcctattataactgaggaaatgcccttgttggaggtattctttataaattttcct
acagggctgctctgtggagaaatcagaaaagcatatgtagaatttgtgaatgtgagcaag
tgtcctcttactgcactgaaggttgtatcaaaacatccagaattttttacttttggtgga
aatactgctgttctaacaccactgagtccatcagcttctgaaaactgtagtgcttacaag
actgttgtgacagattctacctctgtatgcacagcactgatgtcatcagcttcttctgta
aactttgggcttggcacaggaagtcagccagaggtgatacatgtcccacttcctgactct
gtcctcctccctggggcttcaatccagctgccaatgtggttacatggaccagatgaagaa
ggggttcatgaaataaactttttgttttactatgaaagtattaaaaaacactcaaaaatg
tgtcatagagtattaagacacactgcagttatttgtaccagccgatctttgaatgttcga
gctactgtctgcagaagtaatgcccttgaggatgaaggcagaggggacaatatgctggtg
tttgtggatgtggaaaacatcaatactagtgaagctggtgttaaagaatttcatatagta
caagtatcaagtaacagcaaacactggaagttacagaaagctgtaaatctctctgaagac
aaagattataagcttgccagtagagagagaggaaagctatgctttaaagcagtaagatgc
aaaaactctggagaaaattacacatttgcagacattgtctttggaaatgagcagataatc
agttcagctagtccgtgtgcagacttttttttccgaagcttatcttctaaattaaaaaga
acacacgcacaatcaaatatgtttcaaggagctgcaaaacagtcatttgatgaggcagtc
agattgatacaaaaatgtagtgaggtggatttgaatattgttgttctctggaaggcatat
gttgtggaagacaacaagcagcttattttagaaggccagcatcatgttgttcttcataca
gtagggaaggaggctttttcctttcctcaaaagcaggaatcaccagaaatggttctctta
aagttttttcgaccagaaaacacttcactacccacaagaccaacaccagaacagctttct
aaccttatcaagactagtcttcattatccagagtcctttaatcactcatttcatcagaaa
agcctttgtttagtacctgtcactcttctactttccaattgttctgaggctgatgttgat
gtaataattgacttgcggcataaaacaacaagtccagaagcactagaaatccatggttct
ttcacgtggcttgggcaaacacagtacaaacttcagcttaaaagccaggaggtctacagc
ttgcagttgaaagcttgctttgttcgtacaggagtctataatcttggaactcacagagta
tttgccaagttagccgaccaagttactttgtttgaaacaagtcagcagaactccatgcca
gcactgatcatcatcagtaacatttga
DBGET
integrated database retrieval system
