Emys orbicularis (European pond turtle): 135874100
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Entry
135874100 CDS
T11511
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
eob Emys orbicularis (European pond turtle)
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
eob04990
]
135874100 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
eob04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
135874100 (SNX13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
RGS
PX
Rep3_C
BLOC1_2
DUF6395
Motif
Other DBs
NCBI-GeneID:
135874100
NCBI-ProteinID:
XP_065254875
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All DBs
Position
2:241551963..241704985
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AA seq
925 aa
AA seq
DB search
MKCEARPIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYWYYTLSDDESFLLEIRQALQNA
LIQFSTRSKEMDWQPYFTTRLVDDFATHLRVFRKAQQRITEKDDQMKGTAEDLVDTFFKV
EVEMEKEVCRDLVCTSPKDEEGFLRDLCEVLLYLLLPPGDFQNKIMRYFVREILARGILL
PLINQLSDPDYINQYVIWMIRDSNCNYEAFMNVIKLSDNVGELEAVRDKAGEELQYLRSL
DTAGDDINTIKNQINSLLYVVKVCDSRIQRLQSGKEIDTVKLAANFGKLCTVPLDNILVD
NVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVLLSRQRDGKHQTNQTKGLLRA
AAVGIYEQYLSEKASPRVNIDDSLVAKLAETLNHEEPTPEIFDDIQRKVYDLMLRDERFY
PSFKQNALYVRMLAELDMLKDPSFRGSDDGEGESFNGSPTSSINLSLDDLSNVSSDESAQ
LHAYISDTVYADYNPYTVAGVCNDHGKTYALYAITVHRRNPTSEEIWKTYRRYSDFHDFH
MRITEQFENLASILKLPGKKTFNNMDREFLEKRKKDLNAYLQLLLNPEMMKASPALAHCV
CDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKSLPDSLAEGMTKMSDNMGKMS
ERLGQDIKQSFFKVPPLMQKTDSDPEHCRVAAQLDDNVDDNIPLRVMLLLMDEVFDLKER
NQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDSMTSPEQVADAVKRFRDAFWPNGILAE
TVPRRDKDIRMRTRVAGKTKLLEIMPDELKHIIGAETTRKGILRVFEMFQHTQLNKRMVY
VFLEGFLETLFPQYKFHELFSKLHSRSEQMQRYKQRLQSTQAPSLQKRSTYCKLSPFPYD
FQEGKDSTCGRFLPHSPIYVYFTRF
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtgaagccaggcctattaagattgacagaagattgacaggtgccaatataatt
gatgaacctttgcaacaagtaatccagttttcactgagggactatgtccagtactggtat
tatacactaagtgatgatgagtcctttcttcttgaaatcaggcaggctcttcaaaatgca
ctaattcagttttctactaggtcaaaagaaatggactggcagccttatttcaccacacga
cttgttgatgattttgccactcatcttcgagtattcagaaaagctcaacaaaggataaca
gaaaaagatgatcaaatgaaaggtacagcagaagaccttgtagatacgttctttaaggtt
gaagttgaaatggagaaggaagtctgtcgtgatctagtctgcacttctcccaaagatgaa
gaaggattcctaagggatctgtgtgaggtgttactgtatttattgctacctcctggagac
ttccagaacaagatcatgcgatactttgtcagggaaatcctcgcccgaggaattcttctt
ccattaataaaccagctcagtgatcctgattatattaatcagtatgtcatatggatgatt
cgtgattccaattgtaactatgaggccttcatgaatgttattaaattaagtgacaatgta
ggggagctggaagcagtaagagataaggctggagaagaactgcaatatcttcgatcctta
gatacagcaggagatgatatcaatactataaaaaatcaaataaacagcttattatatgtt
gttaaagtatgtgattcaagaatacagaggttgcagtcaggaaaagaaatagatactgtg
aaactggcagcaaactttggaaaactttgcacagtccctctggacaacattctggtagac
aatgttgcactacaattttttatggattacatgcagcagactggaggccaagcacatctc
ttcttctggatgacagtggaagggtacagggttacagcacagcaacagctggaggtgtta
ctaagccggcagagagatggaaaacatcagactaatcaaaccaaaggcctattaagagca
gcggcagttggaatttatgagcagtacttatcagagaaggcatctccgagagttaatatt
gatgactccttggtagcaaaactggcagaaacattgaaccatgaggaaccaacacctgaa
atcttcgatgacattcagagaaaggtgtatgacttgatgctgcgggatgaaagattttac
ccttcattcaaacaaaatgctctgtatgtgcgcatgttagctgaactggatatgctgaag
gatcctagtttcagaggatcagatgatggggaaggagaatcttttaatgggtcccctaca
agcagcataaatttgtccttagatgacctttcaaatgtctcttctgacgagtcagcacaa
ctacatgcatacatttcagatactgtctatgctgactataacccatatactgtggcagga
gtatgcaacgaccatggcaagacatatgcactgtatgcgatcactgtacatcggagaaat
ccaactagtgaagagatatggaaaacgtatcgtcgctacagtgacttccatgacttccac
atgaggataactgaacagtttgaaaacctagcaagtattttgaagcttcctggcaaaaag
acatttaacaacatggacagagaatttttagagaagaggaaaaaagatttaaatgcatat
ttgcagttgttgttaaatcctgaaatgatgaaagcttccccagctttagcccattgtgtg
tgtgactttctggagaataaagcttacagcaaaggaaaaggagattttgctcgaaagatg
gacacatttgtaaatccactgcgtaactctatgagaaatgtttcaaatgcagtcaagtcc
ctgcctgacagcctggcagaggggatgactaaaatgtcagacaacatgggcaaaatgtca
gaaagattgggacaagacataaagcaatcatttttcaaggtgcctcctttaatgcagaaa
actgattccgatcctgaacactgccgtgttgccgcacagcttgatgacaatgtggatgac
aatatccctcttagagtaatgctgctccttatggatgaagtctttgatttaaaggagaga
aatcagtggttaagaagaaatataaaaaatctacttcaacagcttattagagcaacatat
ggagacacgatcaatagaaaaatagttgatcatgttgactcgatgacgtctcctgagcaa
gtagcagatgcagtgaaacgcttcagagatgccttttggcccaatggcattttagcagaa
actgttccacgcagagacaaagatattagaatgcgaacgagagtggcagggaaaactaaa
ctactggagataatgccagatgaactgaagcacatcataggtgctgagacaacacggaaa
ggcattcttcgggtctttgaaatgtttcagcacactcaactaaataagagaatggtatat
gtctttctggagggcttcctggaaaccttatttccacaatataaattccatgagctcttc
agcaaactgcattcacggtcagagcagatgcagagatacaagcagagactacaatctact
caagcgccttccttacagaaaagatctacatactgtaaattaagtcctttcccttatgat
ttccaggaaggcaaagacagcacatgtggaagattccttccccatagccccatctatgta
tatttcaccaggttctaa
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