Emys orbicularis (European pond turtle): 135874112
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Entry
135874112 CDS
T11511
Symbol
SNRPD1
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135874112 (SNRPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eob03041
]
135874112 (SNRPD1)
03032 DNA replication proteins [BR:
eob03032
]
135874112 (SNRPD1)
Spliceosome [BR:
eob03041
]
Complex A
U1 snRNP components
Sm proteins
135874112 (SNRPD1)
U2 snRNP components
135874112 (SNRPD1)
Complex B
U1 snRNP components
135874112 (SNRPD1)
U4/U6.U5 tri-snRNP components
135874112 (SNRPD1)
Complex C
U2 snRNP components
135874112 (SNRPD1)
DNA replication proteins [BR:
eob03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
135874112 (SNRPD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
EBNA2_Core
YomU_Tube
Gemin7
Hfq
AAA_RNF213_3
Phage_Hfq
SM-ATX
API5
Motif
Other DBs
NCBI-GeneID:
135874112
NCBI-ProteinID:
XP_065254890
LinkDB
All DBs
Position
2:214876541..214887733
Genome browser
AA seq
119 aa
AA seq
DB search
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSI
RGNNIRYFILPDSLPLDTLLVDVEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtgaggtttctaatgaaattgagtcatgagactgtgaccattgaactgaag
aatggaacacaggtgcatggaacaatcacaggagtggatgtcagtatgaatacgcatctt
aaagctgtgaaaatgacactgaagaacagagagcctgtacagttggagacattgagtatt
cgaggaaataacattcgatacttcattctgccagacagtttgcctctggataccttgcta
gtggatgttgaaccaaaagtcaaatccaagaaaagggaagcagttgcaggaagaggccgt
ggcagaggtcggggcagaggccgtggccgtggcagaggaagagggggacctaggcgataa
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integrated database retrieval system
