Emys orbicularis (European pond turtle): 135874684
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Entry
135874684 CDS
T11511
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
eob Emys orbicularis (European pond turtle)
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eob03036
]
135874684 (CHD7)
Chromosome and associated proteins [BR:
eob03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
135874684 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
135874684
NCBI-ProteinID:
XP_065255665
LinkDB
All DBs
Position
2:complement(65604678..65720506)
Genome browser
AA seq
3004 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLESLGECGYPENTVNPMGQQMPIDQGFPSLQSSLHHPPTN
QNQAKLTHFDHYNQYEQQKIHLMDQPNRMMSNAPGNGIASPHSQYHNPPVPQVPHGSGTG
GQMGVYPSMQNERHGQPFVDSGSMWGPRAVQVPDQIRAPYQQQQQQPTQPPQTPSGPPGQ
GHSQHMQQMGNYMARGDFSMQQHGQPQQQRMNQFSQGQEGLNQGNPFIATSGPGHLSHVP
QQNPSMAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSRSQTV
PSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYTNAVGFPSNSGQ
GLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAG
IPMEVGSYPNIPHPQPSHQPPGAMGIGQRNMGPRNMQQSRPFMGMSSTPREMGGHMRPNG
CPGVGLADPQAIQERLISGQQHPSQQPSFQQQMPTCPPMPPHPGIHHQSSPPHPHHQPWA
QLHQSPQNTPQKVPVLQHSPSEPFVEKPVPDMTQVSGLNTQLVKNDDYLPSIEQQPQQKK
KKKKNNHILAAGPSKGFGKEDFPGGLDSQDQTRNSLDCSQEEKKKKKKPKSKKEPKDPKE
PKEKKEPKEPKPPKTPKPPKEPKEKKAKNTTPKPKTSKKTSNKKPDSETSAVKKKVNKGK
EGSENSDLEKTPPPSPHEEDDDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAGR
DSPSNTSQSELQESADAEGPVVEKIMSSRSVKKQMENGEEVEIEEFYVKYKNFSYLHCQW
ASVEQLDKDKRIQQKVKRFKAKQGQNKFLSEIDDELFNPDYVEVDRIMDFSHSTDDNGEP
VTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPQMERVERPPADDWKKSESSR
EYKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFL
VIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAI
ITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNT
VEELFSLLHFLEPGRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAP
KEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLING
AEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLD
ILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADT
CIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQ
SMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITI
ESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRK
QTRLYSAVKEDELMEFSDLESDSEEKPCTKPRRPQDKSQGYARSECFRVEKNLLVYGWGR
WTDILSHGRYKRPLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTRALV
NHSGLSAPVPRGRKGKKVKAQSSQPVLQDADWLASCNPDVLFQEDSYKKHLKHHCNKVLL
RVRMLYYLRQEVIGDQADKILEGADSSEVDVWIPEPFHAEVPTDWWDKEADKSLLIGVFK
HGYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPT
RAPFKDEIDEFANSPPEDKEESIESHTTSKHSESNAELGQLYWPTTSTLTTRLRRLITAY
QRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIITEKRQKWTRREEADFYRVVST
FGVIFDPMKQQFDWNQFRAFARLDKKSDESLEKYFNCFVTMCRRVCRMPAKPDEEPPDLS
TMIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGKHDKDL
LIGAAKHGVSRTDYHILNDPELSFLDAHRNFAQNRGAGNASSVSSLNPLGAGCSHTPPIV
PSTPVQDDKATEQAESKVEGSENSAAKEKSDIKEETDIAEKGIKQECDAEAEPGPVKCER
KAIEMSTDVDPKSISEKGSEEDEEEKLDDDDKSEESSQPEAGTVSQGKNFDEESNASMST
ARDETRDGFYLEDGDPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQ
MFDFQGLIPGYTPTAVDSPLQKRSFAELSMVGQASISGSEDITASPQLSKEDALNLSVPR
QRRRRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSNF
SSVTSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLMDGEPPMKRRRGRRKN
VEGLDLLFMSNKRTSLTVEDAEVTKVFEDDMETPPARNIPSPGQLDPDTRIPVINLEDGT
RLVGEDAPKNKDLIEWLKSHPTYTVDMPSYVPKSADVLFSPFQKPKQKRHRCRNPNKLDI
NTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPES
MFDRLLTGPVVREEGASRRGRRPKSEIAKAAAAAAAVASTSGINPLLMNSLFAGMDLTSL
QNLQNLQSLQLAGLMGFPPGLATAAAAGGDSKNSAAMLPLMLPGMAGLPNMFGLGGLLNN
PITAAPGNTTPASSQGETEDGTSKAEEKKNENEEENKDSEKSTDVSATDSANGSVSAATA
AAATSNNTGLPTNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPGLAGLQNAVGS
NEEKATDKTEGAAFKEEENLEGSDAEESLDKTADSSVLEDEIAQGEELDSLDGGDEIENN
ENDE
NT seq
9015 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaggaatgatgagtctatttggagaagatgggaatattttcagtgaaggg
ctggaaagtcttggagaatgtggatatcctgaaaatacagtaaatcctatggggcagcaa
atgcccatagatcaaggattcccctccttacagtcttctcttcatcatcctcccaccaat
caaaaccaagcaaagttgacccactttgatcactataatcaatatgaacagcaaaaaata
catctgatggatcagcctaacagaatgatgagtaatgctcctgggaatggtatagcatct
cctcactcacagtatcacaaccctccagttcctcaggttcctcatggcagtggcactggt
ggtcagatgggagtctatcctagtatgcagaatgaaaggcacgggcaaccctttgtagac
agtggctccatgtggggaccacgggctgttcaggtgcccgaccaaataagagcaccatac
cagcagcagcagcagcaaccgacgcagccaccacagacaccgtcaggaccccctgggcag
ggccattctcagcacatgcagcaaatgggaaactacatggctcgtggtgatttttcaatg
caacagcatggtcaaccacaacagcagaggatgaaccaattttctcaaggtcaagaaggc
cttaatcagggaaatcctttcattgccacctcaggacctggccacttgtctcatgtgccc
caacagaatcctagcatggcaccttctttgcgacactcagtccaacaatttcaccaccat
ccccccaccgcgctccatggagaatcagtagcccacagtcccagattctcccctaatcct
cctcagcagggtgctgttaggccacaaacacttaattttagttctcggagccagacagta
ccctcacctactataaacaactcagggcagtattctcgatatccttacagtaacctaaat
cagggattagttaacaatacagggatgaatcagaatttaggccttacaaataacactcca
atgaatcaatctgtaccaagatacacaaatgctgtaggatttccatcaaacagtggtcaa
ggactaatgcaccagcagcccattcaccctagtggctcactcaaccaaatgaacacacaa
actatgcacccttcacagcctcagggaacttatgcctctccacctcccatgtcacctatg
aaagcaatgagtaatccagcaggtacccctcctccacaggttaggcctggtagtgctgga
ataccaatggaagttggtagttatccaaatataccccatcctcagccgtcacaccagccc
cctggtgccatgggaattggacagaggaatatgggcccccgaaacatgcaacagagtcgt
ccatttatgggtatgtcttcaactccacgggagatgggtgggcacatgagaccaaatggt
tgtccaggtgttggccttgcagatccacaagcaatacaagaacgactgatatctggccag
cagcatcccagccaacagccgtcttttcaacagcaaatgccaacttgtcctcccatgcca
cctcatccagggatacatcatcagtcttcaccaccacatccccaccaccagccttgggca
cagcttcaccagtcaccacagaatactccacaaaaagtgcctgtccttcagcattctcca
tcggagccctttgtagagaaaccagtgccggatatgactcaggttagtggactgaatacc
cagctagtgaaaaatgatgattacctgccatcgattgaacagcagcctcagcaaaagaag
aagaaaaagaaaaacaatcacattcttgcagcgggtcccagtaaaggttttggtaaggaa
gattttcctggtggtcttgacagccaggatcaaaccaggaactcattggattgctcccaa
gaagagaaaaagaaaaagaaaaagcccaagtcaaaaaaggagccgaaggatcctaaagaa
cccaaggaaaagaaggagcctaaggaacccaagcctcccaaaacccccaagcctcccaaa
gagccaaaggaaaagaaagcaaaaaataccacaccaaaacccaagactagcaaaaagaca
agtaacaagaaaccagactcagaaactagtgcagtgaagaaaaaggtcaacaagggaaag
gaaggttctgaaaactcggatttagagaaaacaccaccaccatctcctcacgaagaagat
gatgacccaggtgttcagaagagacgatccagcaggcaggttaagagaaaacgttacaca
gaagacctggagttcaagatttcagatgaggaggctgatgatgcggatgctgcgggaaga
gactccccttcaaatacgtctcagtcagagctacaggaatcggctgatgctgaaggtcca
gtagtagaaaaaatcatgagtagtcgttcagtcaagaaacagatggagaatggagaggaa
gtggaaatagaggaattctatgtaaagtacaaaaacttctcttaccttcattgtcagtgg
gcatctgtagaacagttggacaaggacaagagaattcagcaaaaggttaagcggtttaag
gcaaagcagggtcagaacaagttcctctcagagattgatgatgagctttttaatccagac
tatgtggaagttgatagaataatggatttttcacatagcacagatgataatggagagcct
gttactcattatctggtgaagtggtgttcacttccttatgaagacagcacatgggagctg
aagcaagacatagaccaagctaagattgaagaatttgagaaactgatgtctagggagcca
caaatggagcgtgtggagcgacctcctgctgatgactggaagaaatcggagagttccagg
gagtataaaaacaataacaaactcagggaataccagttggagggagtaaactggcttctt
ttcaactggtacaacacacgaaactgcattttagcagatgaaatggggttgggaaaaact
atccagtctattacatttctctatgagatatatttgaaaggaatccacggtcctttcttg
gttattgctccactgtccacaattcctaactgggaaagggagttccgcacctggacagag
ttgaatgtggttgtgtatcatgggagtcaagccagccggcggaccattcagttgtatgaa
atgtacttcaaagatccacagggtcgggtaataaaggggtcctataagtttcatgctatc
atcactacgtttgaaatgattttgactgactgccctgagctgcgtaacattccatggcgt
tgtgtagtaattgatgaagcccacaggctgaagaacaggaattgcaagctcttggaagga
ctgaagatgatggacctggaacacaaggtgctgctcactggtaccccattacagaacact
gtagaagagctgttcagcttgcttcatttcttggagccaggtcgcttcccatcagaaagc
acattcatgcaagagtttggtgatttgaaaactgaagaacaggtgcaaaagctccaagcc
attttgaagccaatgatgttgagacgccttaaagaggatgtagaaaagaacctggccccc
aaagaagaaacaatcattgaagttgagctgacaaacattcagaagaaatactatcgcgct
attcttgaaaagaatttcacatttctctccaagggtggtggtcaagctaatgtccctaat
cttttaaacactatgatggaactaagaaaatgctgcaatcatccataccttattaatggt
gctgaagagaaaattttggaagagtttaaagaaacacacaatgccgactctccagatttt
cagctccaggcaatgatccaggctgctggcaagctagtactgattgacaagctgctgcca
aaactgaaggctggtggccacagggtgcttatcttttcccagatggtgcgctgcttggac
atactggaagactacctcattcaaagacggtacccatacgagcgaattgatggtcgagta
agaggcaaccttcgtcaggcagctattgacaggttttccagacctgattctgatagattt
gttttcctgctgtgtacaagggcaggaggtttaggcattaatcttactgctgctgatacc
tgcatcatttttgattcagactggaacccccaaaatgacctccaggctcaagctcgatgt
cacagaattggacagagcaaatcagtgaaaatctacaggttgataacaaggaattcttat
gaaagagaaatgtttgacaaagctagtttaaagcttggccttgataaagctgtacttcag
tctatgagtggaagagaaaatgctacaaatggggtacagcagctttctaagaaagaaata
gaagatcttctacgaaagggggcttatggtgctcttatggatgaggaggatgaagggtcc
aaattttgtgaagaagacattgatcagattctcctaaggcgaacacacacaattactatt
gagtctgaagggaaaggctcaacatttgctaaggctagttttgttgcatctgggaacagg
acagacatttccttggatgaccccaatttctggcagaagtgggctaagaaggctgagttg
gatattgatgccttaaatggaaggaacaacctagttattgatacaccaagagtaagaaag
caaaccaggctgtatagtgcagtcaaagaagatgaactaatggagttttcagacctggaa
agtgattctgaagaaaagccctgtacaaagccccgtagacctcaggacaaatcccagggt
tatgcaaggagtgaatgttttagagtggagaagaaccttttggtctatggttggggtcgg
tggacagacatcctttcacatgggcgctataaacgtccgctaacggaacaagatgtggaa
accatctgccggacaatcctggtgtattgtcttaatcactacaaaggagatgaaaatatc
aaaagtttcatctgggatctgatcactccaactgcagatggacaaacacgagccttggtt
aaccactctggcctatctgcaccagtgcccaggggaaggaaaggcaaaaaagtgaaagcc
cagagttcacagcctgtgcttcaagatgctgattggctggcaagctgtaacccagatgtc
ttgtttcaagaggacagctataagaaacacctcaaacatcactgtaataaggtcctgctg
cgtgtccgcatgctgtactatctaagacaagaagttataggggaccaagcagacaagatc
ttagagggtgctgactcaagtgaagtagatgtgtggatacctgaaccattccatgctgag
gttcctacagactggtgggataaagaagcagataaatccctcttaattggcgtattcaaa
catggctatgagaagtacaattctatgagagctgaccctgcgctgtgctttctggaacgg
gttggtatgcctgatgccaaggccatagctgctgaacagagagggacagatatgttagca
gatggtggtgatggaggagagtttgacagagaagatgaagatccagaatataaaccaacc
agagctcctttcaaggatgaaattgatgaatttgcaaactcacctccagaagataaagaa
gaatccatagagagccacacgacaagcaagcacagtgaaagcaatgctgagttaggccaa
ctctactggcccaccacttcaaccctgactacccgtctgcgtcgcctcattactgcctat
cagcgcagctataaaaggcaacaaatgaggcaagaggcactaatgaagacggaccgacgg
agacgtcggcctagggaggaagtgagagcactagaagcagaaagagaagctataataact
gaaaaacgtcaaaaatggacaagaagagaagaagcagatttttatcgtgtagtatctact
tttggggttatttttgaccctatgaaacagcaatttgactggaatcagttcagagctttt
gctaggcttgataagaagtccgatgaaagtttggagaagtactttaattgttttgtgact
atgtgcaggcgggtatgccgaatgccagccaaaccagatgaagaaccacctgatctttcc
accatgattgagccaatcacagaggagcgtgcttctaggactttatatcgcatagaactg
ttacggaaaatccgtgagcaggttctccatcaccctcagttgggggagaggctaaaattg
tgccagccaagcttggatctgccagagtggtgggagtgtggtaaacatgacaaagactta
ctgattggtgctgctaaacatggagtcagtaggacagattatcacatcctgaatgaccct
gaactctcttttcttgatgcccacagaaattttgctcaaaacagaggggcaggtaatgca
agtagtgtgtcttcactaaacccactgggtgctggctgcagtcatacgccccctattgtc
ccatccacaccagtacaagacgacaaggctacagaacaagctgagtctaaagttgagggg
tctgaaaattcagcagccaaagaaaagtctgatattaaagaggagacagatattgcagaa
aaaggcattaagcaggaatgtgatgctgaggctgagcctggacctgttaaatgtgaaagg
aaagctatagaaatgagtacagatgtagatccaaaatctatttctgaaaaaggttcagaa
gaggacgaagaggagaaacttgatgatgatgacaaatcagaagagtcctcccaacctgaa
gcaggaacagtttctcagggtaagaattttgatgaagaaagcaatgcatctatgagcact
gcaagggatgaaacccgtgatggattctatttggaagatggagatccttcagtcgctcag
ttgcttcatgagagaacatttgccttttctttctggcctaaggaccgagtaatgatcaac
cgattagacaacatctgtgaagcagtgctaaaagggaagtggccagtaaataggcgccag
atgtttgatttccaggggctcatacctgggtatactccgacagctgtggacagccctcta
cagaaaaggagctttgcagagctctccatggttggtcaagccagcatcagtggcagtgaa
gatatcactgcttctcctcagttatcaaaggaagatgcactcaatttatcagtcccacgt
cagcggaggaggagacggagaaagattgaaattgaggctgaaagagcggccaagaggaga
aatcttatggaaatggttgcccagttacgagagtctcaggtggtctcagaaaatggacaa
gaaaaagttgtagatttatcaaaggcctcaagagaggcaacaagttctacctcaaatttt
tcatctgttacttctaagtttatcttgcctaatgtctccacaccagtgtctgatgccttt
aaaactcaaatggagctcctgcaagcaggtctttcacgcacacccacaaggcatctacta
aatggttctttaatggatggagaaccgcccatgaagaggaggagaggaaggaggaaaaat
gtagaaggacttgatctattgtttatgagcaacaaacggacatcgctgactgttgaggat
gcagaagtgaccaaagtatttgaagatgatatggagaccccaccggcaagaaacattcca
tctcctggacaactggacccggacactcggatccctgtaattaacttagaggatgggacc
aggctggtgggggaagatgctcctaaaaacaaggatttaattgaatggcttaaatcgcat
cctacttatactgttgatatgccaagttatgtaccaaagagtgcagatgtgctgttttcc
ccatttcagaagccgaagcaaaaacgacacagatgtcgaaaccctaataaattggatata
aacaccttgacaggagaagaaagggtacctgttgtaaataaacgaaatggaaagaagatg
ggtggagctatggcccctccaatgaaggacctgccaaggtggttggaagaaaatcctgaa
tttgctgtcgctccagactggactgatattgttaagcagtctggttttgttccagagtcc
atgtttgaccgtcttctcacaggcccagttgtgagagaggaaggagcaagcagaagagga
agaaggccaaaaagtgaaattgccaaagcagctgcagcagctgccgctgtagcttcaact
tcgggaatcaacccactgctaatgaacagtctatttgctggaatggacctcacaagcctt
cagaatctacagaatctacagtctctccagcttgccggcctcatgggcttccctccagga
ctagcaacagctgcggctgctggaggtgattctaaaaattcagctgccatgctgcctctg
atgttgccaggtatggcagggttacccaacatgtttggattgggtggattgttgaataac
ccaataacagctgctcctggaaacaccactcctgcttccagtcaaggagaaactgaagat
ggcacttcaaaagcagaagagaagaaaaatgagaacgaagaggagaacaaagactctgag
aaaagcacagacgtttctgctactgactctgcaaatggatctgtcagtgctgctactgcc
gccgccgccaccagcaacaacactggattgcccacaaaccctctggccttcaatcctttc
ctattgtccaccatggctcctggcctgttctatccatctatgtttctacctccaggactg
ggaggattgacgctgcctggtttcccaggattagccggacttcagaatgcagtgggctcc
aatgaagaaaaggctactgacaaaactgaaggggctgcatttaaagaagaggagaattta
gaaggcagtgatgcagaggagagccttgataaaactgcagattcctccgttttagaagat
gaaatagcacagggtgaagaattagactcgcttgatgggggggatgaaatagaaaacaat
gaaaatgatgaataa
DBGET
integrated database retrieval system
