Emys orbicularis (European pond turtle): 135875209
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Entry
135875209 CDS
T11511
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
eob Emys orbicularis (European pond turtle)
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eob03019
]
135875209 (TRIM71)
04121 Ubiquitin system [BR:
eob04121
]
135875209 (TRIM71)
Enzymes [BR:
eob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135875209 (TRIM71)
Messenger RNA biogenesis [BR:
eob03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135875209 (TRIM71)
Ubiquitin system [BR:
eob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
135875209 (TRIM71)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_5
zf-B_box_Trim66
CRLF3_N
zf-C3HC4
zf-RING_UBOX
Vgb_lyase
zf-RING_2
DUF4094
Motif
Other DBs
NCBI-GeneID:
135875209
NCBI-ProteinID:
XP_065256273
LinkDB
All DBs
Position
2:220012869..220098468
Genome browser
AA seq
873 aa
AA seq
DB search
MASFPEADFQLCPLCKEMCGSPAPISSNSSTSSSSSQTSNSSSAGGSSCAPSRRLHVLPC
LHAFCRQCLEAQRQHPAAGDALKLRCPICDQKVVISEPSGMDALPSSNFLLSNLLDVVVV
AAAAAEEQKNNGRGGGGGSSSNNRHHHPRQQQQHRSAGSGSSPAAASAVAPSPSSSGGGG
SASLLLRRPHSRQGEPRCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHFIERF
GGAPGSAAAAAPGPAAQLALGQPYPAAPYNILASVFPDRASYCQHHDDEVLHFYCDTCSV
PICRECTMGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQLSIEQAQAVAEQVEM
KANVVQSEVKAMTSRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLDNTI
SAVQQVLEEGRSMDILLARDRMLAQVQELKNVRGLLQPQEDDRVMFTPPDQALYMAIKSM
GFVSSGAFAPLTKATGEGLKRALQGKAASFTVIGYDHDGEPRLSGGDMISAVVMGPDGNL
FGADVNDQQNGTYLVSYRPQLEGEHLVSVMMCNQHIENSPFKVMVKSGRSYIGIGLPGLS
FGSEGDNDGKLCRPWGVCVDKEGYIMVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQFDR
PAGVACDISRRIVVADKDNHRIQIFTFDGQFILKFGEKGTKNGQFNYPWDVAVNAEGKIL
VSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHRLLVIH
PDCQSARFLGSEGTSNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFLCKFGTQG
SGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttcccgaggcggacttccagctatgcccgctgtgcaaggagatgtgcggc
tcgccggctcccatctcctccaactcctccacctcctcctcctcctcgcagacctccaac
tcctcctcggcgggcggctcgtcctgcgccccgtcccgccgcctgcacgtcctgccctgc
ctgcacgccttctgccgccagtgcctggaggcgcagcgccagcacccggccgcgggggac
gcgctcaagctgcgctgccccatctgcgaccagaaggtggtgatctcggagccctcgggc
atggacgcgctgccctcctccaacttcctcctcagcaacctgctggacgtggtggtggtg
gcggccgccgccgccgaggagcagaagaacaacggccggggagggggaggcggcagcagc
agcaacaaccggcaccaccacccccgccagcagcagcagcaccgctcggccggcagcggc
tcgtcccccgccgccgcctctgcggtcgccccgtccccgtcctcctccggcgggggcggc
tcagcctcgctgctgctccggcggccgcacagccggcagggcgagccccgctgcagctcc
tgcgacgagggcaacgcggccagctcgcgctgcctggactgccaggagcacctgtgcgac
aactgcgtgcgggcgcaccagcgcgtccgcctcaccaaggaccatttcatcgagcgcttc
ggcggggcgcccggctccgccgccgccgccgctcccgggccggctgcccagctcgccctc
ggccagccctaccccgccgcgccctacaacatcctcgcctccgtcttcccggaccgggcc
agctactgccagcaccacgacgacgaggtgctgcatttctactgtgacacttgttctgtc
cctatctgccgggaatgcaccatgggacgacatgtgggtcatagctttatctacctccaa
gatgccctccaggattccagaaccctcaccattcaactgctagcagatgctcagcaagga
cgccaggctattcagctgagtattgaacaggcccaagctgtggcagagcaggttgagatg
aaagcaaacgtggtgcagtctgaagtcaaagctatgacatctcgacataagaaggccctg
gaagaacgggagtgtgagctgctgtggaaggtggaaaagattcgtcaagtcaaagccaag
tccctttacctgcaagttgaaaagttgcgtcagaatctaaataaactggacaacactatt
agtgcagttcagcaggtcctagaggagggtcgtagcatggatattctcctggctcgggat
cgcatgctggctcaagtgcaggaactgaagaatgtgagaggccttctacagccgcaggag
gatgacagagtcatgttcactcctcctgaccaggctctgtatatggccattaaatcaatg
gggtttgtcagcagtggggcttttgctcctctgaccaaagccacgggggaaggtctcaaa
cgtgcactacagggcaaagcggcctccttcacagtgataggctatgaccatgatggtgaa
ccacgcctttcggggggcgatatgatctctgcagtggtgatgggccctgatggaaaccta
tttggtgcagatgtcaatgatcagcagaatggaacctacctggtcagttacagaccgcag
ctggagggagagcatctagtctctgtcatgatgtgcaaccagcacatagagaacagtccg
ttcaaggtcatggtaaaatctgggcgcagttacattggcattggactaccagggctttca
tttggcagcgagggagacaacgatggcaagctgtgtcgcccctggggagtttgcgtagac
aaagaagggtacatcatggttgctgatcgcagtaataaccgcattcaggtgtttaagccc
tgtggcacctttcaccacaaatttggcaccttgggttccaggcctggtcagttcgatcgc
cctgctggtgttgcctgtgatatctcgcgtaggattgtcgtggctgacaaggataatcat
cgcatccagatctttacatttgatgggcagttcattctgaaattcggggaaaagggaacc
aagaatgggcaattcaattacccatgggatgtggcagtcaacgccgagggcaaaatcctg
gtctctgacacgaggaaccatcggattcaactgtttggacctgatggtgtgtttctgaat
aaatatggcttcgaaggggcactctggaagcactttgattctccaaggggtgtgactttc
aatcatgaaggccatctggtagtgacagatttcaacaaccatcgcctcctggtcatccat
ccagattgccagtcagcacgcttccttgggtcagaaggcaccagcaacggccagttcctg
cgcccacaaggcgtggctgtggatcaagaggggcgcatcattgtggccgattctaggaac
caccgagtgcagatatttgagtcaaatggtagttttttatgcaaatttggcactcaggga
agtggctttggtcagatggaccgaccttcaggtatagctgtcacccctgatggcatgatt
gttgtggttgacttcggaaacaatcgaattctcgtcttctaa
DBGET
integrated database retrieval system
