Emys orbicularis (European pond turtle): 135875594
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Entry
135875594 CDS
T11511
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
eob Emys orbicularis (European pond turtle)
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eob04121
]
135875594 (SHPRH)
Enzymes [BR:
eob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135875594 (SHPRH)
Ubiquitin system [BR:
eob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135875594 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-2nd
SHPRH_helical-1st
Linker_histone
Helicase_C
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
PHD
zf-RING_5
PEP-utilisers_N
Motif
Other DBs
NCBI-GeneID:
135875594
NCBI-ProteinID:
XP_065256597
LinkDB
All DBs
Position
3:complement(113044603..113183316)
Genome browser
AA seq
1690 aa
AA seq
DB search
MSNRRKRAPPLRMDEEKKKQLCWNMHEDRRNEVILLDDNMDEDHPVPGPSTSSVSFVIDD
DSIDEGLAYRENRGSKSVGSSTDDGEDSCSILTSISVQLNIVVLPYHSDNSWKALLGEFV
LQLLPQKILIEKIHKRSFTLMRTDSGDQLQICLHARSGEEGGEEEKESLGDYEEGILVES
SLNSEMLEDLRWLQKKKVIGLYQRPREDQALKVGIYLLEAGLSKSEFLSDGGGRIKKANQ
LIQKLMEKYYNFIIPDVLEEDEEESDRELERQNIEELYDFVRHTHQQEIQFLREDVQHSA
LIPVLRPYQSEAVNWMLQRENFRNNPTNENTLHFLWREVITPDGVKLYYNPFTGCIIREH
PVAGPPWPGGILADEMGLGKTVEVLALILTHTQRDVKQDVLTLPEGKLVNFFVPPQPTEG
NKKKKTKKVELKSKEKVQYPSLRVMILAAVKEMNVKKGASIIAIFKYVSAIYRYDIQRNR
RLLKRTLEKLIAEQVVEQVKGHGLAGSFKLGKNYKEQKRHERTKKQTTRSPGRIQKTSLP
NAKSQTKESASKVTSSEKVKPPRQVDIPAEEHDYCTTSKNNKKSETGQKTCIKEENLQPR
VMDLESADLQGDLMSSDSTSPVLSASKHTDDAEVLKDQSSDSQEHAGSVIQHASSIFPFN
TSDYRFECICGELGLVDCKARVQCLKCHLWQHAECVNYKEENLKIKPFYCPHCLVAMKPV
STGATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKHGFLQPHMLAEQEVVITTYD
VLRTELNYVDIPHSNSEDGRRFRNQKRYMAIPSPLVAVEWWRICLDEAQMVECTTAKAAE
MALRLSGINRWCVSGTPVQRGLEDLYGLVLFLGVDPYWVKHWWDQLLYRPYCRKNPQPLY
NLIANIMWRSAKKDVIDQIQIPPQTEDVHWLHFSPVERHFYHRQHEVCCQDALAKLRKIS
DWTLKLSSLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCR
TECEEAHRQLVCALNGLAGIHIIKDEYALAADLYREVLRSSEEHKEKLKTDSLQRLHSTH
NLMELLAAKHPGIPPTLRDGRLEEEAEQLRQHYMSKSNAEVSEAHQALQPVLQTIRELQR
KIHSGSPWWLDVIQTAIQYAVDEELVQRVQNEITSNYKQQTNKLSMADKFRDCRGLQYLL
TTQMEEVKKFQKLVKEAVKNLEGPPSKKVIEAATICHLRPVRLPLNNCVFCKADELFTEY
ESKLFSHTVKGQMAIFEEMIEDEEGLVDDRLPTTSRGLWAASETERSLKAILSFAKAHRM
DVRLIEEGNTFLELFEAWKKEYKLLHEYWMVLRDHVSAIDELAMATERLRVRHPDEPKPS
PPVLHIIEPHEVEQNRVKLLNDKAVAKSQLQKKLGQLLYLTNLEKSQDKTTGGVNPEPCP
ICARQLGKQWAVLTCGHCFCNECIAIIIEQYSVGTRRSSIKCAICRQTTSHKEISYVFTA
ETANQEDDIPVKGSHSTKVEAVVRTLKKIQFKDPGAKSLVFSTWQDVLDIISKALYDNNM
VFAQINGISKFQENLSAFKYDPKINILLLPLHTGSNGLNIIEATHVLLVEPILNPAHELQ
AIGRVHRIGQTKPTIVHRFLIKATIEERMQMMLKTVERSHTSSSMKQSEASVLTVADLAD
LFTEETEELE
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatcgtcgaaagcgtgcgcctccactgaggatggatgaggagaaaaagaagcaa
ctctgttggaatatgcatgaagaccgaaggaatgaggtaatactattggatgataacatg
gatgaagaccaccctgttccaggtccaagcacctcttctgtatcctttgttatagatgat
gatagcattgatgaaggactggcttacagagaaaacagagggtcaaagtcagtgggttcc
tcaacagatgacggagaagactcttgctccatcttgacctctatatctgtacagctaaat
attgtagtcttgccttaccattcagacaattcctggaaagctttacttggagaatttgtt
cttcagcttcttcctcagaaaattcttattgagaagatccataaaaggagttttactttg
atgagaacagattctggtgatcagctgcaaatctgtcttcatgcaagaagtggagaagag
gggggtgaggaggaaaaagaaagcctaggtgattatgaagagggcatattggtggaatca
tccctcaatagtgaaatgttagaagacttgagatggttgcaaaagaagaaggtaattgga
ctttatcaaagacctagagaagatcaagcattaaaggttggaatttaccttctggaagct
ggcttaagcaaatcagaatttctcagtgatggaggtgggagaataaaaaaggccaaccag
ctgattcagaaactaatggaaaagtactacaactttataattccagatgtgttggaggag
gatgaggaagaatctgacagagagctggaacgacagaatattgaagagctgtatgacttt
gtgaggcacacacatcagcaggaaatccagtttttgagggaggacgtacagcactctgca
ttaattccagtactgaggccataccaaagtgaggctgtgaactggatgttgcaacgggag
aatttcagaaacaaccctaccaatgaaaacacactacactttctatggcgagaggtcatc
actccagatggagtaaaactctactataatccatttactggctgcattatccgtgaacac
ccagttgcagggcctccatggcctggaggaatcctggcagatgagatgggtcttggaaag
acagtagaggtactggctcttattctgacacacacccaacgagatgttaaacaagatgtt
ctgacactacctgagggtaaattggtgaacttcttcgttccaccccagcctactgaagga
aacaaaaagaaaaaaacaaagaaagtggagcttaagtcaaaggagaaagtacagtatccc
agcttacgggtgatgatcttagcagctgtcaaggaaatgaatgtgaagaagggagcttcc
atcattgcaatatttaagtatgtcagtgccatatatagatatgacattcagagaaaccgg
cgtcttctcaaaagaactttggaaaaactaattgcagaacaagtagtagagcaggttaaa
ggtcatggtctggctggatctttcaagttggggaagaattacaaagaacaaaagaggcat
gagagaaccaaaaaacagacaacaaggagtcctggaaggattcagaagacttctttgcct
aatgctaaatctcaaaccaaagaatcagcaagtaaggtcacatcttcagaaaaagtcaaa
ccaccccggcaggtggacattcctgcagaagagcatgactactgtacaactagcaaaaat
aacaaaaagtctgagacaggccaaaagacttgcataaaagaagaaaatcttcagccaaga
gttatggacttggagtctgctgatttgcaaggcgacctcatgtccagtgattccaccagt
cctgtcctcagtgcatctaaacatacagatgatgcagaagtcctaaaggaccagtcttca
gactcccaagaacatgctggcagtgtcatacagcatgccagttccatttttccattcaac
acctctgactatcgttttgaatgcatttgtggtgagcttggcttggttgactgtaaggcc
cgtgtgcagtgcctgaagtgccacctatggcagcatgctgaatgtgtaaactacaaagag
gaaaacttgaagattaagcccttttattgtccccattgcctagtagcaatgaaaccagtt
tctacaggagccactctgataatctctccaagttccatctgccatcagtgggtggatgag
atcaacaggcatgtgagatcatcttcccttcgagttctggtgtatcaaggtgtgaagaaa
catggcttcttgcagcctcacatgttagcagagcaggaggtagtcatcaccacttacgat
gtccttcgcactgagctgaactacgtggacatccctcatagtaacagtgaagatgggcgc
cgtttcaggaaccagaagcggtatatggccatcccaagtcccttagtagcagtagagtgg
tggaggatctgcctagatgaagcacagatggttgaatgcaccactgcaaaggctgcagaa
atggcactccgtttgagtggaatcaatcgctggtgtgtcagtggcactcctgtacagcga
ggattagaagatctatatggcttagtgctttttcttggagttgatccttactgggtcaaa
cattggtgggatcagcttctgtatcgaccttactgtaggaaaaaccctcagcctctctac
aatctaattgccaacataatgtggagatcagcaaagaaggacgtgattgatcaaattcag
attccccctcagacagaagatgtacactggcttcacttttctcctgtggagagacacttt
tatcatcgtcagcatgaagtgtgctgccaagatgcgctagcaaaactcaggaagatttct
gattggactcttaaacttagcagcttggacaggaggacggtcacttctattctgtaccct
ttgctgcggctgaggcaggcctgctgtcatccacaagctgttcgtggggaattcttgcca
ttgcagaaaagcaccatgaccatggaggagctactgacttcactgcagaagaaatgtcga
accgaatgtgaggaagcccatcgacaactggtgtgtgctctcaatggtttagctggtatc
catataattaaagatgaatatgcattggcagcagacctgtacagagaggtgttgcgttcc
tctgaagagcacaaagaaaagctcaaaacagattcgctgcaaagacttcattctacacac
aacctgatggaactactggcagcaaagcatccagggataccaccaaccttgcgtgatggc
agacttgaggaagaggctgaacaacttcgacaacattatatgagtaaatccaatgcagaa
gtttcagaagctcatcaggccttgcagccagtgctacagaccattcgtgagctccagaga
aagatacattctgggtcgccttggtggttggacgtgatccagacagcaatacaatatgcc
gttgatgaggagcttgttcagcgtgtgcaaaatgagataaccagtaactacaaacagcaa
actaataaactctccatggcagacaagttccgtgactgtagaggccttcagtatctactc
acaacccaaatggaggaggtgaagaagttccagaagcttgtaaaagaagctgtgaaaaat
ctagaaggtcctccctctaagaaggttattgaagctgccactatctgccatctgcgacct
gttagacttcctttgaacaattgtgtcttctgtaaggctgatgagctgttcacagaatat
gagtcaaagctgttctctcatactgtgaaaggccagatggctatcttcgaagagatgata
gaagatgaagaagggctggttgatgaccgtttgcctaccacaagtcgaggactatgggct
gcaagtgagacagagcgctccctaaaagccatactgtcttttgccaaagctcaccgaatg
gatgttagactaattgaagaagggaatacatttctggaactctttgaagcatggaagaag
gagtacaagttacttcatgaatattggatggtactgagggatcatgtgtctgctatcgat
gaacttgctatggctacagaacggctccgagtgcgtcatcctgatgagccaaaacctagc
ccccctgttcttcacatcatagaaccacatgaggtagaacaaaatcgagtgaaacttttg
aatgacaaggcagttgccaaatcacagcttcagaagaaactaggccagctcctatatctt
actaatttggagaagtctcaggataaaaccactggaggagttaatccagaaccgtgtcca
atttgtgcccgccaactgggaaaacagtgggcagtgctgacatgtggacattgcttctgt
aatgagtgcatagctattattatagagcaatacagtgttggcacccgcagaagttcgatt
aaatgtgccatctgcaggcagacaacttctcataaagaaatatcctacgtcttcactgca
gagactgcaaaccaggaggatgatattcctgtgaagggaagtcactccaccaaagtggaa
gcagtggttcggactctgaagaaaatccagtttaaagatccaggggctaaatctttagtt
ttctcaacgtggcaagatgttttggacataatttcaaaagctctatatgataacaacatg
gtgtttgctcagattaacggaattagtaaatttcaggagaacctctcggcatttaaatat
gatcccaagatcaatattttgttgctaccccttcatactggttccaatggattaaatata
attgaggcaactcatgttctgctagtggagcccattttgaatcctgcacatgaacttcag
gccattggcagagtgcatcgtattggacaaacaaagcccaccattgttcacaggttcctg
ataaaagcaacaatagaagaaagaatgcagatgatgctgaaaactgtagagagaagccac
accagctcttccatgaaacagtcagaagcctcagtgttgacagtggctgatctggcagac
cttttcacagaagaaactgaagaacttgagtga
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integrated database retrieval system
