KEGG   Emys orbicularis (European pond turtle): 135875913
Entry
135875913         CDS       T11511                                 
Symbol
TBPL1
Name
(RefSeq) TATA box-binding protein-like 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
eob  Emys orbicularis (European pond turtle)
Pathway
eob03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:eob00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    135875913 (TBPL1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:eob03000]
    135875913 (TBPL1)
   03021 Transcription machinery [BR:eob03021]
    135875913 (TBPL1)
Transcription factors [BR:eob03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    135875913 (TBPL1)
Transcription machinery [BR:eob03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     135875913 (TBPL1)
  RNA polymerase III system
    TFIIIB
     135875913 (TBPL1)
  RNA polymerase I system
    SL1/TIF-1B
     135875913 (TBPL1)
SSDB
Motif
Pfam: TBP DUF3378
Other DBs
NCBI-GeneID: 135875913
NCBI-ProteinID: XP_065257064
LinkDB
Position
3:104960172..104978684
AA seq 186 aa
MDADSDVALDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATI
WSSGKVICTGATSEEEAKFGARRLARTLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEF
TKNNRPHASYEPELHPAVCYRIKPLRATLQIFSTGSITVTGPNVKAVASAVEQIYPFVFE
SRKEIL
NT seq 561 nt   +upstreamnt  +downstreamnt
atggatgcagacagtgatgttgcattggacattttaatcacaaatgtagtgtgtgttttt
agaacaagatgtcatttaaacttgaggaagattgcattagagggagcaaatgtgatctac
aagcgtgatgttgggaaagtattaatgaagcttaggaaacctaggattacggccacaatt
tggtcctcaggaaaagttatttgcacaggagccacaagtgaagaagaagctaaatttggt
gccagacgattagctcgtactttgcagaaactaggttttcaggtaattttcacagatttt
aaggttgtcaatgttttagcagtgtgcaacatgccctttgaaatcagattgccagaattt
acgaagaataatagacctcatgctagttatgaaccggagcttcatcctgcagtgtgctac
agaataaaacctctcagagctaccttacagattttttcaacaggaagtatcacagtaacg
gggccaaacgtaaaggctgttgccagtgctgtggaacagatttacccattcgtgtttgaa
agcaggaaagaaattttataa

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