Emys orbicularis (European pond turtle): 135876822
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Entry
135876822 CDS
T11511
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135876822 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eob03019
]
135876822 (HBS1L)
Messenger RNA biogenesis [BR:
eob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
135876822 (HBS1L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
GIP1_N
DO-GTPase2
Aq_aa27
DUF6331
Motif
Other DBs
NCBI-GeneID:
135876822
NCBI-ProteinID:
XP_065258245
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Position
3:complement(105653108..105759412)
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AA seq
688 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDCCISPSTAAQFIYSRRDKPSAFAERLEEEYG
YEDAEEPAKNITSNHQLTGVDQARLYSCLDQMREVLGETAPEQVMVEAVLNSKFDVQKAL
DLVLAQDSKQNVKTKNEEAVITGKTTKGKPRDSQSTRIDSKIVPKVTKMTVSGKKQAMGF
EVPSVIAEENGHSANTPQKRPSSEDSSVTSGVVELVSKSALPSQTIQIPEEQSTVPTPVK
KSSKTRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYE
QESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMI
TGAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQE
RFQEITSKLGQFLKQAGFKESDVAYIPTSGLGGENLVTSCQSSELTEWYKGKCLLEQIDC
FKPPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITL
HDEPVDWAAAGDHVSLTLTGMDIIKINVGCIFCGLKEPIKACTRFRARVLIFNIDVPITK
GFPVLLHYQTVSEPATIRRLLSILHKSTGEVTKKKPKVLTKGQNALIELQTQRPVALELY
KDFKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcacaggaacgtccgaggctataactacgacgaagattttgaagatgatgat
ctttatggccaatcagtagaagatgattgttgtatttccccttcaacagctgctcagttt
atttactcaagacgtgacaaaccctcagcatttgctgagcgattagaagaagagtatggc
tatgaagatgcagaagaacctgccaagaatattacatccaatcaccagctaactggagtt
gatcaagctcgtctttattcgtgccttgaccagatgagagaagtgctgggggaaactgca
ccagagcaggtgatggtggaagcagtgttgaatagtaaatttgatgtacagaaggctttg
gatcttgtgcttgcacaagacagtaagcaaaatgtgaagaccaagaatgaagaagctgtg
attacaggaaagacaacaaaaggaaaaccaagagattcccagtcaaccagaatcgattct
aaaattgtgccgaaagttaccaaaatgactgtgtctggaaagaaacaagctatgggattt
gaagttccaagtgtgattgctgaagagaatggccatagtgctaatacacctcaaaaaaga
ccatcatctgaagattccagtgtcacttctggagtagttgagttggtctctaaatcagct
cttccatcccaaacaattcagattccagaagagcagagtacagtacctactccagtgaaa
aagtctagtaagacaagacaacaaatagatgtgaaagcagagctggagaagaggcaagga
ggaaaacagctgctgaatttagtggtaataggacatgttgatgcaggtaaaagtactcta
atgggtcatttactctaccttctgggcaacgtgaacaaacgaactatgcacaaatacgag
caggaatccaaaaaggctggcaaagcttcatttgcttatgcatgggtcttggatgaaact
ggggaagaaagagaaaggggagtaacaatggatgtgggtatgaccaaatttgagacaaag
actaaagttattacattgatggatgctccgggccataaagatttcatcccaaatatgatc
acaggagctgcacaggctgatgtggctatcttggttgtggatgccagcaggggggagttt
gaagcagggttcgagactggtggacagactcgagaacatgggttattggttcgctctctt
ggagtaacacaactggcagttgcagtcaataaaatggaccaggtcaattggcaacaggag
agatttcaggaaattaccagtaaacttggccagtttcttaaacaagctggctttaaggag
tccgatgtagcttatatccctacaagtggtcttggtggtgaaaatctagtcacaagctgt
caatcaagtgaactcactgaatggtataagggaaaatgtttgttagaacaaattgattgt
ttcaagccaccacagagatcagtggataaaccgtttagattatgcgtgtctgacgttttt
aaagaccaaggatcaggattttgtgtgactggtaaaattgaagcaggctatattcagact
ggagaccgacttctggctatgcctcccaatgaaacttgcactgcaaaaggaatcacactg
catgatgaaccagttgattgggctgcagcaggagatcacgttagtctcactttgaccggc
atggatatcatcaaaatcaatgttggctgtatattttgtggtctcaaggaacccatcaaa
gcctgcactcgtttcagagctcgagtcctcatctttaatattgatgtccccattactaaa
ggattccctgtgcttttacactatcaaaccgtaagtgagcctgccactattagacgatta
ttgagtatccttcacaagagtactggcgaagtcacaaagaaaaaacctaaggtcctgact
aaaggacagaatgctttaatagaactacaaacacaaaggcctgttgccctggaattgtac
aaagattttaaagaacttggaaggtttatgttacgctacagcggatccactatagctgca
ggagttgtcacagagattaaagaatga
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