Emys orbicularis (European pond turtle): 135876852
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Entry
135876852 CDS
T11511
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
eob Emys orbicularis (European pond turtle)
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eob03041
]
135876852 (DDX1)
03016 Transfer RNA biogenesis [BR:
eob03016
]
135876852 (DDX1)
Enzymes [BR:
eob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135876852 (DDX1)
Spliceosome [BR:
eob03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
135876852 (DDX1)
Transfer RNA biogenesis [BR:
eob03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
135876852 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
135876852
NCBI-ProteinID:
XP_065258285
LinkDB
All DBs
Position
3:complement(28539388..28573269)
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AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGVTKGKYYYEVSCHDQGLCRIGWSTMQASLDLGTDKFGFGYGGTGKKSHNKQFD
SYGEEFTMHDTVGCYLDIDKGQIKFSKNGKDLGVAFEIPPHIKSQALFAACVLKNAELKF
NFGEEDFKFPPKDGFIALCKAPDGNVLKSQHTGNAQVAQTKNLPNAPKALIVEPSRELAE
QTLNNVKQFKKNVDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLLQGYSDFINRIHGQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKSDKQWERLGKNHIRTDEVHAKDNTRPGVN
SSEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNMEQYFMQQGGGPDRKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIRGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLG
EIEEHLNCTISQVEPDIKVPVDDFDGKVTYGQRRATGGGTYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRMF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggctttctccgagatgggtgttatgccagagatagctcaagctgtggaggagatg
gactggcttcttcccacagatattcaagctgagtctatcccgttgattctaggaggtggt
gatgtgcttatggctgcagaaactgggagtggaaagactggtgctttcagcatcccagtt
atccagattgtttatgaaacacttaaggaccagcaagaaggcaaaaaggggaaaactact
atcaaaactggtggggcagtgctcaacaaatggcagatgaacccatatgatagaggatca
gcttttgcaattggatcagatggtctgtgttgccaaagcagagaggtaaaggaatggcac
ggatgcagagcaactaaaggagtgactaaaggaaaatactattatgaagtatcctgtcat
gaccagggcttgtgcagaattgggtggtccactatgcaggcttcactggatttgggcact
gacaaatttggctttggctatggtggaactggaaagaagtcgcacaacaaacagtttgac
agttatggtgaggaattcactatgcatgatacagttggatgctatctggatatagacaaa
gggcaaatcaagttctccaaaaatgggaaagaccttggcgttgcatttgaaatcccacca
catataaagagccaagcactctttgcagcctgtgttctgaagaatgctgaattgaaattt
aattttggtgaagaagactttaagtttccaccaaaggatggatttattgctctttgcaaa
gctcctgatggaaatgttctgaaatcgcagcacacaggaaatgcacaagtggctcaaaca
aagaaccttcctaatgctccaaaagcattaattgtggaaccatccagagagttagcagaa
caaactttgaacaacgtaaaacaattcaaaaaaaacgttgataatcctaaattaagggag
ctcctaattattggtggtgttgctgcaagagatcagctttccgttctggaaaacggtgtg
gacatagttgtgggaacccctggaagattggatgacttggtgtcaactggaaagcttaac
ttatctcaagttagattcctggttcttgatgaagctgatggcctccttctccaaggttat
tcagacttcataaacagaatccatggtcagattcctcagataacttcagatggaaaaaga
ctgcaggttattgtgtgttctgcaactctacattcttttgatgtgaagaaactgtctgag
aagatcatgcatttccccacttgggttgacttaaaaggagaggattctgtcccagaaact
gtgcaccacgttgttgttcctgtgaatcccaaaagtgacaaacaatgggaaaggcttggc
aagaatcatatcaggactgatgaggtacatgcaaaagataatacaaggcctggtgttaac
agttcagaaatgtggtctgaagctattaaaatactaaagggagagtatgctgttcgagca
attaaggaacacaagatggatcaagcaattattttctgcagaactaaaatagactgtgat
aacatggagcaatactttatgcaacaaggaggaggcccagataggaaaggacatcagttc
tcatgtgtctgtctgcatggtgacagaaaacctcatgaaagaaaacaaaacttggaaaga
tttaagaaaggagatgtcagattcttgatatgcaccgatgtagctgctagaggaattgat
atccgtggtgttccttatgttatcaatgtcacgcttcctgatgaaaagcaaaactacgtt
catcgaattgggagagtaggcagagctgaaagaatgggtctggcgatttccctcgtggca
acagaaaaagagaaggtgtggtatcatgtttgtagtagccgtggaaagggttgctataat
accaggctgaaggaagatggaggttgcactatatggtacaatgagatgcagttgctgggt
gagattgaagagcacctgaactgtactatttcccaagttgagccagatataaaagtaccg
gtggatgacttcgatgggaaagttacatatggacaaagaagggctacaggcggtggaacc
tataaaggccatgtggatattttggcacctacagtacaagagttggctgcccttgaaaag
gaggctcagacatctttcttacatcttggctaccttcctaaccagctgttcagaatgttt
tga
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