KEGG   Emys orbicularis (European pond turtle): 135876894
Entry
135876894         CDS       T11511                                 
Symbol
RAB1A
Name
(RefSeq) ras-related protein Rab-1A
  KO
K07874  Ras-related protein Rab-1A
Organism
eob  Emys orbicularis (European pond turtle)
Pathway
eob04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:eob00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    135876894 (RAB1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:eob04131]
    135876894 (RAB1A)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:eob04147]
    135876894 (RAB1A)
   04031 GTP-binding proteins [BR:eob04031]
    135876894 (RAB1A)
Membrane trafficking [BR:eob04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    135876894 (RAB1A)
 Autophagy
  Other autophagy associated proteins
    135876894 (RAB1A)
Exosome [BR:eob04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   135876894 (RAB1A)
  Exosomal proteins of other body fluids (saliva and urine)
   135876894 (RAB1A)
  Exosomal proteins of colorectal cancer cells
   135876894 (RAB1A)
GTP-binding proteins [BR:eob04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    135876894 (RAB1A)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA SRPRB FeoB_N AAA ABC_tran AAA_7 AAA_29 LANC_like AAA_16 AAA_22 Septin AAA_5 Dioxygenase_N CRAL_TRIO_2 TniB
Other DBs
NCBI-GeneID: 135876894
NCBI-ProteinID: XP_065258340
LinkDB
Position
3:200139030..200162707
AA seq 205 aa
MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL
LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGA
TAGGAEKSNVKIQSTPVKQSSGGCC
NT seq 618 nt   +upstreamnt  +downstreamnt
atgtccagcatgaatcccgaatatgactatttattcaagctacttctgattggagactct
ggtgttgggaagtcttgccttctacttaggtttgcagatgacacgtacacagaaagttac
atcagcacaattggtgtggattttaaaatcaggactatagagttagatggaaaaacaatc
aaacttcaaatatgggacacagcaggccaagagagatttcgaacgatcacctccagttac
tacagaggagcccatggcatcatagttgtgtatgatgttacagaccaggagtccttcaat
aatgtaaaacagtggctgcaagaaatagaccgttatgccagtgaaaacgttaacaagttg
ttggtagggaacaaatgtgacctgaccacaaagaaagtagtagactatacaacagcaaag
gaatttgcagattcccttggaattccatttttggaaaccagtgcaaagaatgcaacaaat
gtagaacagtctttcatgaccatggctgcagagattaaaaaacgaatgggtcctggagct
acagctggtggtgcagaaaagtccaatgttaaaattcagagcactccagtcaagcagtct
agtggaggttgctgctaa

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