Emys orbicularis (European pond turtle): 135877310
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Entry
135877310 CDS
T11511
Symbol
PALS1
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob04519
Cadherin signaling
eob04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
135877310 (PALS1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
135877310 (PALS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
eob04990
]
135877310 (PALS1)
Domain-containing proteins not elsewhere classified [BR:
eob04990
]
PDZ domain-containing proteins
MAGUK family proteins
135877310 (PALS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
L27
PDZ_6
SH3_1
PDZ_2
SH3_9
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
135877310
NCBI-ProteinID:
XP_065258801
LinkDB
All DBs
Position
4:complement(72608885..72748771)
Genome browser
AA seq
675 aa
AA seq
DB search
MTTSHMNGHVTEDSDNETKNVELASPEEPQKHREMAVDCPGDLGSRMMPVRRSAQLERIR
QQQEDMRRRREEEGKKQELDLTASMRLKKLAQIPPKTGIDNPMFDTEEGVILESPHYAVK
ILEVEELLASLKHIQHTLVDPQSQEDLSLILQLVQNTDFQNAFKIHNAVTVHMNKASPPY
PLISNAQELAQEVQCVLKPSHQKDGQELSALLNAPHIQALLLAHDKVAEQEMQPEPVTNE
KVYENFGLYGGETVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDE
VLEINGIEIRGKDVNEVFDLLADMHGTLTFVLIPSQQSKPPPAKETVIHVKAHFDYDPSD
DPYVPCRELGLSFQKGDILHVISQEDPNWWQAYRDGDEDNQPLAGLIPGKSFQQQREAMK
QTIEEDKEPEKSGKLWCAKKNKKKRKKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKR
PIVLIGPQNCGQNELRQRLMNNEVDRFAAAVPHTTRSRRENEVAGRDYHFISRQAFETDI
AAGKFIEHGEFEKNLYGTSIDSVRQVINSGKICLLNLHTQSLKTLRNSDLKPYIIFIAPP
SQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLIN
KLDTEPQWVPSTWLR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttctcatatgaatggacatgttacagaagattctgacaatgaaacaaaaaat
gtggagcttgcatctcctgaggaacctcagaagcacagagagatggctgttgattgccct
ggggatttgggctccaggatgatgccagtacgacgaagtgctcaacttgagcggattcgc
cagcaacaggaggacatgaggcgcaggcgagaagaagaaggaaagaaacaagaattagac
cttactgcttcaatgaggcttaagaaactagcgcagattcctcccaaaactggaatagat
aatcctatgtttgacacagaagaaggagtcattctggagagtcctcattatgctgtaaaa
atactagaagtggaagagctgttagcttctcttaagcatatccaacacactttggtagac
ccccagagccaagaggatctctctctcattttacaacttgtccaaaatactgattttcag
aatgcatttaagatacataatgctgtcacagtgcacatgaacaaggccagccctccgtat
cctcttatctccaatgcacaagagctagcacaagaggtacagtgtgttttgaaacccagt
caccagaaagatgggcaggagcttagtgctttgctgaatgcccctcacattcaggcactt
ttattagctcatgataaggttgcagagcaagaaatgcagccagagccagtgacaaatgaa
aaggtttatgagaactttggcctgtatggaggggagacagtgaaaatagttcgcattgag
aaggcacgagatattccattgggtgctacagtgcgcaatgaaatggattctgtcatcatt
agtcgaatagtgaaagggggtgctgcagagaagagtgggttattacatgaaggggatgaa
gttctggaaattaatggcattgagattcgtggaaaagatgttaatgaagtttttgacttg
ctggctgacatgcatggcactctgacatttgtgctgatacccagtcaacagagcaagccg
cctcctgccaaggagacagttatacatgtgaaagcacattttgactatgatccttctgat
gatccttatgtaccttgccgagagttaggtctgtcttttcaaaagggagatatactccat
gtgatcagccaagaagatccaaactggtggcaggcctaccgagatggagatgaagacaat
cagcctttggcaggccttatcccaggaaagagctttcaacagcaaagagaagcaatgaag
caaaccatagaagaagacaaggagccagagaaatcaggaaaactctggtgtgcaaagaaa
aataaaaagaaacggaaaaaagttttgtacaatgccaataaaaatgacgattatgacaat
gaagaaattttaacctatgaggaaatgtcactgtatcaccagccagcaaataggaaaagg
cccattgtcctgattggcccacagaactgtggccagaatgaactacgtcagagactaatg
aataatgaagtagatcgctttgcagctgcagttcctcataccactcggagtaggcgagag
aatgaagtagctggcagagattaccatttcatctcacggcaggcatttgagactgacata
gctgcagggaaatttattgagcatggcgagtttgagaagaatctgtatggtaccagcata
gactctgtgcggcaagtaatcaactctggcaagatatgccttttaaatctccatacacag
tcattgaagaccctacgcaattcagacttgaaaccgtatattatcttcattgcaccacct
tcgcaagagcggctacgtgctttattggccaaagagggtaaaaatccaaagccagaagaa
ctaagagaaatcatagagaagaccagagagatggaacagaacaatggccactactttgac
acagcgattgtgaattctgatcttgataaggcatatcaggagctacttcgtttaataaac
aaacttgacacagaacctcagtgggtgccatccacctggttacggtga
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