Emys orbicularis (European pond turtle): 135877329
Help
Entry
135877329 CDS
T11511
Symbol
SRCAP
Name
(RefSeq) helicase SRCAP
Organism
eob Emys orbicularis (European pond turtle)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
K-box
HDA2-3
DUF7091
Motif
Other DBs
NCBI-GeneID:
135877329
NCBI-ProteinID:
XP_065258830
LinkDB
All DBs
Position
4:complement(154800128..154825994)
Genome browser
AA seq
3181 aa
AA seq
DB search
MGYTSRRPADSQAPHWTDRVSPSLPLPSTLNRSSLPRERETVEVESDEEEEFSAHTGDSE
TGSPERRLGCQGTQELDSSSQRLLDQNEAGSQHALEQDDSTSATSKAIGARGEEQGSSKM
QSNPPQQHHALRSEIAPDKMTGSNPVSPASSGSPASSGSVSPSHLTHDSSLDSHLGFDVP
RLQSKALASPGVYASDPASMWDKTHAEIAEQAKHEAEIENRIAEMKKEGFWSLKRLSKVP
EPVRPKVHWDYLCEEMQWLSADFAQERRWKRGVARKVVRMVIRHHEEQKQKEERAKREEQ
AKLRRIASSIAKEVKQFWSNVEKVVQFKQQSRLEEKRKKALDLQLDFIVGQTEKYSDLLT
QSLNETFPMASKTGSSSHISSSHAGSTASSPPPPPHLTDEEDGDFQPHEESDDEETIEVE
EQQEGNDSETHRREIELLKQESELPLEELLQSLPAQILENSCSAAPSISSSNNEEEEAAG
QSEEEQEKAKSVMQRNKRPWKPDKEDEEFTANEEEAEDEEETIDAEEKLEGDMDHRKELD
DLAQEGELPMEELLQRYAGAYASDFEMDESDSSSDASEPSTSEYEEESEDEDSSSQSDST
AEEESEEEEESQEEEEEEDAPAEEATAASREEDFGVEYLLKRDEDRGEGSNDAAPALGPK
KEITDIAATAESLQPKGYTLATTQVKTPIPYLLRGTLREYQHIGLDWLVTMYEKKLNGIL
ADEMGLGKTIQTISLLAHLACEKGSWGPHLIIVPTSVMLNWEMEIKRWCPSFKILTYYGA
QKERKLKRQGWTKPNAFHICITSYKLVLQDHQAFRRKNWKYLILDEAQNIKNFKSQRWQS
LLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEY
NESLVKRLHKVLRPFLLRRVKVDVEKQMPKKYEHVIKCRLSKRQRYLYDDFMAQATTKET
LATGHFMSVINILMQLRKVCNHPNLFDPRPIHSPFITQGICFSTASLVLCALNRDPFKHV
DMGIFDLINLEGRVSRYEADTFLPKWKVTRKLIEEIAESPDPPPRPKPVKMKVNRMLQPV
PKPENRTVVLVNSPRPVAPLQRPMAPVLPEALAPMHPMGPVLPGPVQPPLLPHPMAVPIS
LPLPLPPSPVPVPPAARPQGPTLVPTLSQNNAAAAVLQAPVSAQQVLPTLMPAAQLVPNA
PQPPMLPAPATAAAASTLKPGPVPAPAVRLATNPLNPGAVGSMMKPVTVHSTTSTLPGYN
FPATSTVQQRLLLSPDMQARLPSGEVVSIAQLASLANRPLQSAPGSKPLTFQIQGNKLTL
TGTQVRQVTMAQPRQLQRNVVHLVSAGGQHHIISQPAQVALIQAMTQQGAQAQGGVQAMS
GPQPTTILPAPASATTAAATSAAISVPIAATPVPSSMVNSSGVVKIVVRQAPRDGLVPAP
ALQQPPRPATATTLPSLPAALMAQRAQLPVAPMPPVRLPTQPLVPVRAPTPLQALVRPMI
RVVQAPVPSMEQSAPAPAPPSPATAAPLPTPPATTIAAAVCPALAPRPAAAPSPVPKEEP
ETLMLRSTTPTPPPPSPRAPRHRRQPPPPPRSPFYLESLEEKRKKQKEERLDRLFRLNEQ
HCNLAPIYGTEVLRLCTLFPPGPPREQEEEGQEVAPELDGWRGASYSHCYMAQVHRDPQH
LEAYWQRASAIAQAILIPQQRVEQLADIIERFIFAMPPVEAPAITIHTSHPPPSLLLHQA
IFKETLRREISPRASGLHRIVCNMRTQFPDLRLIQYDCGKLQTLDLLLRQLKAGAHRVLI
FTQMTRMLDVLEQFLNYHGHIYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVG
VNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKR
MLGDMAIEGGNFTTAYFKQQTIRELFEMPLDEPAKKEGEVLTMAQEDEEDPMANKQTQIL
EQALCKAEDPEDIRAATQAKAEQVAELAEFNENIPLDADERPSKEEEEEMSKAEQEIASL
MEQLTPIERYAMNFLEASLEDISREELKQAEEQVEAARKDIDQAKDEVVFKLPDDEDEGR
LSEEGYIKKSKKAKVPSRAGPERTGTRMSERLRGTRLSLREADGVDTKSPQARLPSLRHL
RGHHARLEAEEAEDHLSLVAQHTRGAAIRRDLVWEETPAPTRKAAAKREESGTKVPGAGE
RVLRPIPHRTEAPIIGERVFRTSPQRPEPPATGDKVLRGTPQRAEPPATIERVLRAIPQR
ADTPVPGDRVLRGAPQRAEPLAAMERVLRSAPPRTDAPAPGDRVPRLAPLRPEAPPAGEQ
DLRPEAPAGAKLLQPRPEVAPAGEETPQPTLPATEMGMVLGAPALLGHESTAPTGELASK
KPPAEHMLRVEPPPTWEKVLGSMELATGAKMRSVEPSSASERVPLPAHCSLEIPAPHKPV
PTPETPASGEESPEKAKGSLGKAEVAGELAQRPVELDGVAVKRGEPVRRALEEPESPAPD
GPAAELPPETPAHCAARTGVEPPTAEPFSTTEGKGPGEVEPQPVWPLSGSLNQSLEAANS
LPRLKTPPPSKEHNGLERPSPLSNSLAEPQPRELAQGATEPLEIAIGCSSSLKEVSKRGL
GDQEDKPKHPDGVSAANTASLGLGEMQPGTTSSSDSPSPAKTPRRRTSADVEIRQNHQGQ
DGPAAKVLRKLPGRLVTVVEEKELIRRRRNRIHKLDTTGSIVVSPSSSSAHSISELELSP
SSKELPLLRDLPARRRIELESRAAKERGDEGSGLELPPSLPPPPLKRKRGRPPKNKSPEQ
PSQGEAQPPPGTHVPRVRKPEIKTPEPSSPKTLKQPCKGEARPPPGTLKPRAQKLEPKAP
EPASPRSKTESSENDSPLEKRRRGRPPKAQWAPATPSTESPPKRKRGRPPKNPASPRVET
AAPRPGSTSDRDTSAEKEPPPPGRKRRWRRKEEPGQAPSESSSDGEEARPLTRLARLRQE
EKLESGSECSALLPSQSAAPKPEPDGTSSGESSTSEQTPARSTRQRPGSLVPPLEQEHQR
RKRGCLSEGGKSPGAAGSSEDDGGGESESSAELSGEEGERRPKRRRRHAGRATGSRRRQC
PRGSSADRILRSAAATPAGNTRSATGTTPGGVAGAPTPSATAAPAAMVTSSLSIRGRKPK
T
NT seq
9546 nt
NT seq
+upstream
nt +downstream
nt
atgggttataccagccggcggccagccgactcccaggctccgcactggacagacagggtg
tccccgtccctgcctctccccagcacccttaacaggagcagtcttccccgggaaagagaa
accgtggaagtggagtctgacgaggaggaggagttctcagctcacacaggtgattcagag
acaggcagccccgagcgcaggctgggctgccaggggacccaggagctggacagttcgtcc
cagcggttgcttgaccagaatgaggccggttcccagcatgcactggagcaggacgacagc
acttcggccacgagcaaagctatcggggcgcgaggcgaagagcaagggagcagtaaaatg
cagagcaatcctccccaacagcaccatgcactgcgcagtgagattgcaccagacaaaatg
acggggagcaatcctgtgtcaccggcctcttcggggtcacctgcctccagtggcagtgtc
tcgccatcacacctcactcacgattcctctctggacagtcacctgggctttgatgtgccc
aggctgcaaagcaaagctctggcgtccccaggagtttacgcctcggacccggccagcatg
tgggacaagacgcacgctgagatcgctgagcaggccaagcatgaggcggagattgagaac
cgcatcgcggagatgaagaaggaggggttctggtctttgaagaggctctccaaggtgccg
gagccagttcgccccaaggtacactgggattacctctgtgaggagatgcagtggctttcg
gcagactttgcccaggagcgacgctggaagaggggtgtggccaggaaggttgtgcggatg
gtgatccggcaccatgaggagcagaagcagaaggaggagcgagccaagcgggaggagcag
gccaagctgaggcgcatcgcctcctccatcgccaaagaggtcaagcagttctggagcaac
gtggagaaggtagtgcagttcaagcagcagtctcgcctggaggagaagaggaagaaggcc
ctggacctgcagctggacttcatcgtgggccagacggagaagtactcagatctgctgact
cagagcctcaacgagaccttccccatggccagcaagactggctcctcctcccacatcagc
tcttcccacgccggctccaccgcttccagccccccaccacctccacacctcaccgatgaa
gaagatggggacttccagccccatgaggagtcagatgacgaggagactattgaggtggag
gagcagcaggaagggaacgactcggagacgcaccggcgtgagatagagctgctgaagcag
gagagtgagctgcccctggaggagctgctgcagtccctgcccgcccagatcctggagaat
tcctgcagcgctgccccctccatctccagctccaacaacgaggaggaggaggcagcgggg
cagagtgaggaggagcaggagaaagcaaagtccgtcatgcagaggaacaaaaggccgtgg
aagcctgacaaggaggatgaggagttcacggccaacgaggaggaagctgaggatgaagag
gagacgatcgatgctgaagagaagcttgaaggggacatggatcacaggaaggaactggat
gacttggcccaggaaggggagctgcccatggaggagctgctgcagagatacgccggcgcc
tacgcctcggactttgagatggatgagtcggatagctcctcggatgcctcggagcccagc
acctcggagtacgaggaggagtcagaggatgaggacagcagcagccagtcagactccacc
gcagaggaggagagtgaggaggaggaggagagccaggaagaggaggaggaggaggatgcc
cccgctgaggaagcgacggcggcgagccgggaggaagactttggcgtggagtacctgttg
aaaagggacgaggatcggggagaggggagtaacgacgcagcccccgccctggggcccaag
aaggagatcacagacatcgcagccactgccgagagcctgcagcccaagggctacaccctg
gccaccacccaggtgaagacgcccatcccttacctgctgcgggggaccctgcgggagtat
cagcacatcggcctggactggctggtcaccatgtacgaaaagaagctcaatgggatcctg
gcggacgagatgggactgggcaagaccatccagaccatctccctgctggctcacctggcc
tgcgagaagggtagctggggtccccacctgatcatcgtgcccaccagcgtgatgctgaac
tgggagatggagatcaagcgctggtgccccagtttcaagatccttacctactatggggcg
cagaaggagcgcaagctcaagcggcagggctggaccaagcccaatgccttccacatctgc
atcacctcatacaagctggtgctgcaggaccaccaggcgttccggcgcaagaactggaag
tacctgatcctggatgaggcccagaacatcaagaacttcaaatcccagcgctggcagtcg
ctgctcaacttcaacagtcagaggcggctgctgctgacaggcacccccctgcagaacagc
ctgatggagctctggtccctcatgcacttcctgatgccccacgtcttccagtcgcaccgc
gagttcaaggagtggttctccaatcccctgacaggcatgatcgagggtagccaggagtac
aacgagagcctggtcaagcggctgcacaaggtgctgcggcccttcctcctgcggagggtg
aaggtggatgtggagaagcaaatgccaaagaaatacgagcacgtcatcaagtgccggctg
tccaagcgccagcgctatctctacgatgacttcatggcccaggccaccaccaaggagact
ctggccacagggcatttcatgagcgtcatcaacatcctgatgcagctgcggaaggtgtgc
aaccatcccaacctcttcgacccccggcccatccactcgcccttcatcacccagggcatc
tgcttcagcaccgcctccctcgtcctgtgtgccctcaaccgcgatccctttaagcatgtg
gacatgggcattttcgacctcatcaacctggaggggcgcgtgtcccgctacgaggccgac
accttcctgcctaagtggaaggtgacaaggaagctgatcgaggagatcgccgagtccccg
gaccccccgcccaggcccaagcctgtcaagatgaaagtgaacaggatgctgcagccggtg
ccaaagccagagaaccggaccgtggtgctggtgaacagccctcgccccgtggcccccttg
cagagacctatggctcctgtgttgccagaggccctggcccccatgcatcccatgggcccg
gttctcccggggcccgttcagcctcccctgctccctcaccccatggccgtaccaatctcg
ctgcccctgcccctcccgccatcccccgtgccggtgcctcccgctgccaggccgcagggc
ccaacgctagtgcctacactgagccagaacaacgccgctgctgccgtgctccaggccccg
gtgtctgcccagcaggtcctgcccacactgatgcctgcggcccagctggtcccaaatgcc
ccccagccccccatgctgccggcccctgccaccgctgctgctgcctccaccctcaagcct
ggcccggtgccagcccccgccgtgcggctagccaccaaccccctgaacccgggcgccgtg
gggagcatgatgaagccagtgacagtccattccaccaccagcaccctgcctggctacaac
ttcccggccaccagcactgtgcagcagaggctgctgctctccccggacatgcaggcccgg
ctgccctcgggcgaggtggtgagcatcgcacaactggcctcgctggccaaccggcccctg
cagagcgccccaggcagcaagcccctcaccttccagatccaaggcaacaagctgaccctg
acgggcacccaggtgcggcaggtcaccatggcccagccccgacagctgcaaaggaatgta
gttcacctggtctctgccgggggtcagcaccacatcatcagccagccggcccaggtggct
ctcatccaggccatgacccagcagggcgcgcaggcgcagggcggggtgcaggccatgtca
ggcccccagcccaccaccatcctgcccgccccagcctctgccaccacggcagccgccact
tcagcagccatcagcgtccccatagctgccacgccagtgccctcctccatggtgaacagc
tctggtgtggtgaagatcgtggtgcggcaggccccacgggacggcctggtgcctgcccca
gccctacagcagcctccacgcccagccacagccaccaccctgcctagcctgccggccgcc
ctgatggcacagcgagcccagctccccgtggcacccatgccgcccgtgcggttgcccact
cagccactggttccagtgcgggcacccaccccactgcaggccctggtgcgacccatgatc
cgggtggtgcaggcgccagtgcccagcatggagcagtcggctccagcaccggctccacct
tctcccgccacggccgcccctcttcccaccccccctgccaccaccatcgctgctgctgtc
tgccctgcactggctccccggcccgcagccgcgcccagcccagtgcccaaggaggaaccc
gagacactaatgctacgctccaccacgcccaccccgcctcccccgtcgccacgggctcca
cggcacagacggcagccccctcccccgccccggtcacccttctatctggaatcacttgaa
gagaagcggaagaagcagaaggaggagcgcctggaccggctcttccgcctcaacgagcag
cactgcaacctggcccccatctatggcaccgaggtgcttcgcctctgcaccctcttccca
cctggcccccctcgggagcaggaggaggaggggcaggaagtggcacctgagctggatggc
tggaggggggccagctacagccactgctacatggcacaggtgcatcgggacccccagcac
ctagaggcgtattggcagcgggcctcagccattgcccaggccatcctgatcccccagcag
agggttgagcagttggcagacatcattgagaggttcatctttgctatgcctcccgtggag
gcgcctgccatcaccattcacacctctcacccgcccccgtcactcctgctccaccaggcc
atcttcaaggagacactgcggcgggagatctcgccccgcgccagcggcctgcatcgcatc
gtttgcaacatgcgcacccagttccccgacctgcgcctcatccagtacgactgcgggaag
ctccagaccctggacctgttgctgcgacagctgaaggccggggcgcaccgggtcctcatc
ttcacccagatgacccgcatgctggacgtgctggagcagttcctcaactaccatgggcat
atctacctgcgcctggacggcagcacccgcgtggagcagagacaggcgctgatggagcgt
ttcaacgctgacaagcgcatcttctgcttcatcctgtcgacacgcagcggaggcgtgggg
gtgaacctgacgggcgctgacactgtggtgttctacgacagcgactggaaccccaccatg
gacgcccaggcccaggaccgctgtcaccgcatcggccagacccgcgatgtccacatctac
aggctgatcagcgagcggacagtggaggagaacatcctgaagaaggccaatcagaagagg
atgctgggagacatggccattgagggcgggaacttcaccacagcttacttcaaacagcaa
accatccgggagctcttcgaaatgcccttggatgagccagccaagaaggaaggggaggtc
ctcaccatggcgcaggaggatgaggaggatcccatggccaacaagcagacccagatcctg
gagcaggcgctgtgcaaggccgaggaccctgaggacatccgggcggccacgcaggccaag
gctgagcaggtggcagagctggccgagttcaacgagaacatccccctggacgcggacgag
cggcccagcaaggaggaggaggaggagatgtcgaaagctgagcaggagatcgcctcgctc
atggagcagctcacccccattgaacgctatgccatgaacttcctggaggcctctctggag
gacatcagccgagaggagctgaagcaggcagaggagcaggtggaggccgcccggaaggac
atagaccaagccaaggatgaggtggtgttcaagctgcctgacgacgaggacgagggtcgg
ctcagcgaggaaggctacatcaaaaagagcaagaaggccaaggtgcccagccgtgcgggc
ccagagcgcactggcacacgcatgagtgagcgactgaggggcactcgcctctccctgcgc
gaggcagatggagtggacaccaagtcgccccaggcccggctccccagcctgcgccacctg
cggggccaccatgccaggctggaggctgaggaggcagaagaccacctgtccctggtggcc
cagcacacgcgtggcgcagccatccgcagggacctggtgtgggaggagacgccagctccg
acccgcaaggccgcggccaagagggaggagtcggggaccaaggtccccggggctggcgag
agggtgctgcggcccatccctcacagaacagaggcccccatcatcggggagagggtgttc
cggacctctccacagagacctgaaccccctgccaccggggacaaagtgctgcgaggcacc
ccccagagagccgagcccccagccaccatagagcgggtgctccgagccatccctcagaga
gcagacacccccgtccccggggacagggtgctacgaggtgccccacagcgagcagagccc
ctggctgccatggagcgggtgctgcggagcgcccccccaagaacagacgctccagcccct
ggggacagggtgccccggctggccccactcagaccagaagcacctcctgctggggagcag
gacctaagacctgaggcaccagcgggtgcgaagctcctccagccaagacctgaggtagca
cctgccggagaggagaccccccagccaacgctcccagctaccgagatggggatggtcttg
ggggcgcctgccttgctagggcatgagagcacagcacccacaggggagctagcctcaaag
aagccacctgctgagcacatgctgagggtggaacccccacccacttgggaaaaagtgctg
ggatccatggagctcgcgacgggagcgaagatgaggagcgtggagccatcttctgcctca
gagagagttcccctaccagcccactgcagcctggagatcccagccccccacaagccagtg
ccaaccccggagacgccagcctctggggaggagtcacctgaaaaagccaagggatctttg
ggcaaagctgaggtagccggagagctggcccaacgcccagtggagctggacggtgtggcc
gtgaagaggggagagccagtcaggcgtgccctggaggagccggagagcccggcacccgat
gggcccgcagcagagctccccccggagacgcctgcccactgcgctgctaggacgggggtc
gaaccacccactgctgagcctttctccaccacagagggcaaagggccaggagaggtggag
ccccagccagtctggcctctctcgggctccctgaaccagtccttggaggctgccaactcc
ctgcctcgactgaaaacgccgccccccagcaaggagcacaacgggctagagcggccttcc
cctctctccaacagcctggccgagccccagcccagggagctggcacagggtgccacagag
ccactggagatagccattgggtgcagcagcagcctgaaggaggtgtccaagagggggctg
ggggaccaggaagacaagcccaagcacccagacggagtgagtgcagccaacaccgcctcc
ctggggctgggggaaatgcagccagggacgacctcctcctcggacagcccatcgccggcc
aaaacaccgcgccggcggaccagcgctgacgtggagatccggcagaaccaccagggccag
gacggcccggctgccaaggtcttgcggaagctgccaggccgcctggtcaccgtggtggag
gaaaaagaactgatccgacgccggcgcaaccgcatccacaagctggacaccaccggcagc
atcgtggtgagccccagcagcagttcggcccacagcatctccgagctggaattgtccccc
tccagcaaggagctgccgctgctccgtgacctacccgcccgacgcaggattgagctggag
agccgggccgccaaggagaggggagacgagggatctgggctggagctgccccccagcctg
cccccgccgcccctcaagcgtaaacggggccggccccccaagaacaagtctccagagcag
ccaagccagggggaagcacagccaccacccggcacccatgtaccccgcgtcaggaagcca
gagatcaagactcccgagccatcctcacccaagaccctgaagcagccatgcaagggggag
gcacggccaccgcccggcaccctgaagccacgtgcccagaagctggaacccaaggcccct
gagccagcctcgcccaggagcaagacagagagcagtgagaatgactcccccctggagaag
cgccggcggggccggccccccaaggcacaatgggcccccgccactcccagcactgagtca
ccccccaagcgcaagcggggccggccccccaagaacccagcttccccccgcgtggagaca
gcagccccccgccctggctcaacctcggaccgcgacacctccgccgagaaggagccgccc
ccacctggccgcaagaggaggtggagaaggaaggaagagcctggccaggcccccagcgag
agctcgtcggatggcgaggaggcccgccccctcacccggctggcccgtctccggcaggaa
gagaagctggagtcgggtagcgagtgctcggccctgctcccatcccagagcgctgcccct
aagccagagccagacggcacctcgtcaggggagagcagcacctccgagcagaccccggcc
cgctccacccgccagcgtcctggcagcttggtgccaccgctggagcaggagcatcaaagg
cgcaagcgggggtgcttgtcagagggtggcaagtcccccggggctgctggctcatcggag
gacgacgggggcggcgagtcagagtcctcagcagagttgagcggcgaggagggcgagcgg
cggcccaagcgccgccgccgccacgcaggccgagccaccggcagcaggaggcggcagtgc
ccacggggcagttcggccgaccgcatcctgcgaagcgccgccgccaccccagccggcaac
acccgctcggccaccggcaccacgccggggggggtggctggagcccccaccccctcggcc
actgctgctcctgccgccatggttacctcctcactaagtatcagaggccgcaagcccaaa
acgtga
DBGET
integrated database retrieval system
