Emys orbicularis (European pond turtle): 135877618
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Entry
135877618 CDS
T11511
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03013
Nucleocytoplasmic transport
eob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135877618 (THOC6)
09122 Translation
03013 Nucleocytoplasmic transport
135877618 (THOC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eob03019
]
135877618 (THOC6)
03041 Spliceosome [BR:
eob03041
]
135877618 (THOC6)
Messenger RNA biogenesis [BR:
eob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
135877618 (THOC6)
Spliceosome [BR:
eob03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
135877618 (THOC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_NOL10_N
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
WD40_Gbeta
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_SPT8
Beta-prop_WDR75_1st
DSE1_N
Beta-prop_IP5PC_F
Beta-prop_VPS8
Beta-prop_ACSF4
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR41
PAC11
ASA1
Beta-prop_DCAF12
TRM82_WD
WDR54
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
135877618
NCBI-ProteinID:
XP_065259194
LinkDB
All DBs
Position
4:complement(158398295..158404207)
Genome browser
AA seq
332 aa
AA seq
DB search
MAPGEMDAQRALELLHMTVFSQSVSPCGKYLAAGNSYGEIAIFSLSAALSSEAKEESKKP
VVSFTAHDGPVYAMVSTERQLLSSGNGEVRAWNWSDIIKKGCKEAWSRRPPYRSSLEVPE
INTLQLNPKDNSLLLAGGDCAVHAMDLESGAFTHEFRGHSDYVHCLALRDQSQECLSGSE
DGTVRMWDLRTGAQVQLIEVHKYEECSRPQHGKWIRCLATDCDWMVCGGGPALSLWHLRS
VTPTTVFPLPHCQQHVMFYQDLILSAGHSPAINHLQISGEIRAQIPCTPRSVHSLCVNER
SPEHKVLTAAGSSHKVDVFTNFSYRAFSLCFA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcacctggggagatggacgcccagcgcgcgctggagctgctgcacatgaccgtcttc
tcccagagcgtctcgccctgtggcaagtacctggcagcggggaacagctatggggagatc
gccatcttcagcctctcggcggcactgagctccgaagccaaggaggagagcaagaagccg
gtggtgtccttcacagcccacgacgggccggtctacgccatggtctccaccgagcggcag
ctgctgagctccggcaacggcgaggtcagggcctggaactggagcgacatcatcaagaag
gggtgcaaggaagcctggagccgcagacccccgtacaggagcagcctggaggtgcccgag
atcaataccctgcagctgaaccccaaggataacagcctcctgctggccgggggcgactgc
gccgtgcacgccatggacctggagtccggcgccttcacccacgagttccgggggcacagc
gactacgtgcactgcctggcgctgcgggaccagtcccaggagtgtctgtcgggcagcgag
gatggcactgtacgcatgtgggatctacggaccggggcgcaggtccagctcatcgaagtg
cacaaatacgaggaatgcagccggccccagcacgggaagtggatccggtgcctggcgaca
gactgtgactggatggtgtgcggggggggcccggcgctctctctctggcacttgcgctcc
gtgacccccaccacggtcttccccctgccccactgccagcagcacgtcatgttctaccag
gacctgatcctctcggcagggcacagcccggccatcaaccacctgcagatcagcggggaa
atcagggctcagatcccctgcacgccccgctccgtccactcgctctgcgtcaacgagcgc
tcccctgagcacaaggtgctgacggccgccgggagcagccacaaagtcgatgtcttcacc
aacttcagctaccgggcgttttccctctgcttcgcgtag
DBGET
integrated database retrieval system
