Emys orbicularis (European pond turtle): 135877647
Help
Entry
135877647 CDS
T11511
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03022
Basal transcription factors
eob03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135877647 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
135877647 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eob03021
]
135877647 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
eob03400
]
135877647 (GTF2H1)
Transcription machinery [BR:
eob03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
135877647 (GTF2H1)
DNA repair and recombination proteins [BR:
eob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
135877647 (GTF2H1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
135877647
NCBI-ProteinID:
XP_065259244
LinkDB
All DBs
Position
4:complement(120713993..120745279)
Genome browser
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLNAVDNSVAPSKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKVKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSKD
LFAECAKMDEKGLKTMVSQGVKNPLLDLTALEDKSLDEGYGVSSVPSTSNSSKSLKESSN
AAIIKRFNHHSAMVLAAGLRKQEAQNDHYSETSSMDGNSRDSDFFQPPIKKVKLQEAIEY
EDLGKNNSIKTIALNLKKSDRYYHGPTPIQSQQYATSQDIINSFHSIREEMEAYVPRLTQ
VLSSGAATSSITALSPGGALMQGGTQQAINQMVPNDVQSELKHLYVALGELLRHFWSCFP
VNTPFLEEKVMKMKSNLERFQVTKLCPFQEKIRRQYLSTNLINHIEEMLQTAYNKFHTWQ
SRRMLKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatcatctgaggaagtgttactgatcgtaaagaaggtgcgtcaaaagaaacag
gatggggctctctaccttatggctgaaaggatagcatgggcacctgaaggcaaagaccga
ttcacagtcagccatatgtatgcagatataaaatgccagaaaatcagtcctgaaggaaag
gctaaaattcagctacagctggtattgcatgcaggggacacaaccaacttccacttctct
aatgaaagcacagcagtgaaggagcgagatgcagtgaaggaccttcttcagcagctgtta
cccaaattcaagaggaaagcaaataaagaacttgaggaaaagaacagaatgctgcaagaa
gatcctgttttgtttcagctttataaagacctcgttgtgagccaagtaattagtgctgaa
gaattctgggccaaccgtttaagcttgaacgctgtggataattctgtggcacctagtaag
caggatgtgggcatctctgcagcttttctggctgatgttcggcctcaaacggatggttgc
aatggtctgaggtataacttaacttcagatattattgaatccatattcaggacgtatcct
gcagtaaaagtgaaatatgcagaaaatgttccacataatatgacagaaaaagaattctgg
acacgatttttccagtctcactacttccatcgagataggctaaatacaggctcaaaagac
ctctttgctgaatgtgccaaaatggatgaaaaagggttaaaaacaatggtgtctcaaggg
gtgaaaaatccactgctagatttaacggccttggaggataaatcgttagatgagggttat
ggtgtttcctctgtgccatccacatcaaactcctcaaagtccttaaaggagagtagcaat
gctgccattataaaacgctttaatcatcacagtgccatggtccttgcagctgggctcaga
aaacaagaagcacaaaatgatcactacagtgagaccagcagtatggatggaaactccagg
gattcagatttctttcagccaccaataaaaaaggtgaagctacaggaggctattgaatat
gaagatttaggaaagaataatagcattaaaactattgcactaaacctaaagaaatctgat
cggtattatcatggtccaactccaattcaatcacagcaatatgcaactagtcaggatatt
attaattcttttcatagtattagagaagaaatggaagcctatgtacccagactaactcag
gttctttccagtggtgctgctactagcagcatcacagccctgtcacctggaggagcactt
atgcaaggtgggacacagcaagccataaaccagatggtgccaaatgatgttcagtctgaa
ctgaaacacttgtatgtggcacttggggagctactacgtcacttctggtcctgctttcct
gttaatacaccattcctagaagaaaaggttatgaaaatgaagagtaacttggaaagattt
caagttacaaagctctgtccattccaagaaaaaattcggagacagtatttaagcacaaat
ttgataaatcatatagaagagatgttgcagacagcctacaacaagttccacacgtggcag
tcccgacgtatgctgaagaaaacgtga
DBGET
integrated database retrieval system
