Emys orbicularis (European pond turtle): 135877796
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Entry
135877796 CDS
T11511
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135877796 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eob03019
]
135877796 (DCP1B)
Messenger RNA biogenesis [BR:
eob03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135877796 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
135877796 (DCP1B)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
DUF6589
Motif
Other DBs
NCBI-GeneID:
135877796
NCBI-ProteinID:
XP_065259423
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All DBs
Position
1:complement(117752983..117811995)
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AA seq
610 aa
AA seq
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MAAAVAGAALLGKGLDISLAALQRHDPYISSIVDVASQVALYTFGHRANEWEKTDVEGTL
FVYTRSASPRHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEE
CQRIAELMKNLTQQEQFKARQGAGAGASPMIQSSGDSKEVDILRMLTKAKDEYTKCKTCS
EPKQMTSSSAIYDNPNLIKPIPVKPSETQHQQIPHQGKNMDSEPQHLSLTALFGKQENPT
IYQDVPEQSQKKHQLNLSVRQRVVRSLSYEEPSGHSPSAEKQLCPAIQKLMVRGTDLHPL
SELPENRLCENGNVRSVGEVFTGLFQPVTSHGIVTSHPAQDTTGTQSLLQKLQGQSGSVT
KMDPSATGTVSSTASIFSRTSAATASAAQINNMTQPHLVYFNGSLPTQTLEPQTVGKEQS
KLPRQPLSLSGNQSTSSGVISPQELLKKLQIVQQEQQLHVSSRPTLAAKFPVVTQNTNTL
KPLDAWIDKTSGAQKQSPLFQVIPPQRIPATVTPALLMSPMLFTQSTPAPPKASESGCLP
PANQESASNSASLLLPMQNPEPSVVNSNSLTKMQLQETLLHLIQNDDNFLNIIYEAYLFS
VRKAAIKKSM
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggtggccggggccgccctgctgggcaaggggctggacatcagcctggcg
gcgctgcagcggcacgacccctacatcagcagcatcgtggacgtggccagccaggtggcg
ctctacaccttcgggcaccgcgccaacgagtgggagaaaactgatgtggaaggaacactc
tttgtttacacaagatcagcttctcccaggcatggcttcaccattatgaacaggctgagc
atggaaaatcgaacagaacccatcactaaagacctagatttccagctgcaggaccctttt
ctgctttacagaaatgccagattgtccatttatggaatttggttttatgataaggaagaa
tgccaaagaattgcagagctcatgaaaaatctaactcagcaggagcaattcaaagcacgg
cagggggctggagcaggagcctctccaatgatccagagctctggtgatagcaaggaagtg
gatatcttacggatgcttactaaggccaaagatgaatataccaagtgtaagacctgttca
gagccaaaacaaatgaccagttcctctgctatctatgacaacccaaacctgatcaaacca
ataccagtgaagcccagtgaaactcagcaccaacaaatacctcatcaaggcaagaacatg
gactccgaaccacaacacttatctttgacagcactgtttggaaaacaagaaaatcctacc
atataccaagatgtcccagaacagtcacagaaaaagcaccaacttaatctttctgtcagg
cagagggtagtgcgttcactgtcctatgaggaacctagcggacattcaccctcagcagag
aagcagctttgcccagctattcaaaaacttatggtgcgtgggacagaccttcatccactc
tctgagcttcctgagaatcgactgtgtgaaaacggcaatgtccgctccgtaggggaggtt
ttcactggactcttccaaccggtgacttctcatggtattgtaacatctcatccagcccag
gacacaactggcactcaaagcttgttacagaaactgcagggacaatcaggatcagtgacc
aaaatggacccaagtgcaacaggtactgtaagttcaacagcttcaatcttcagcaggact
tctgctgctacagcatcagcagcacagataaataacatgacccagccacatctggtatat
ttcaatggctctcttccaacccagactttagagcctcagactgttggtaaagaacagtcc
aaacttcctagacagccactttccctctcgggcaaccaatcaaccagttctggagtgatt
tcaccccaagagttactgaaaaaactccagatagtgcaacaggagcaacagttacatgtg
tccagcagacctaccttggcagctaagtttcctgtagttactcagaacaccaacactcta
aaacccttggacgcctggatagacaagacatcaggtgcacaaaagcagagccctctcttt
caggtcatcccacctcagcgcattcctgctactgtgactcctgcactgctgatgtccccc
atgctgttcacacagtccacacctgctccaccaaaggcaagtgaaagtgggtgcttacca
ccagcaaatcaagaatctgcttctaattcagctagccttctccttcctatgcagaatcca
gagccatctgtcgtaaacagcaactcattgaccaagatgcagcttcaggaaacactttta
cacctgatccagaatgatgacaacttcttaaacattatctatgaagcttatctcttcagt
gtgagaaaggcagcaatcaaaaagtctatgtaa
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