Emys orbicularis (European pond turtle): 135878030
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Entry
135878030 CDS
T11511
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob04514
Cell adhesion molecule (CAM) interaction
eob04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
135878030 (NFASC)
04517 IgSF CAM signaling
135878030 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eob04515
]
135878030 (NFASC)
Cell adhesion molecules [BR:
eob04515
]
Immunoglobulin superfamily
L1 family
135878030 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
Ig_5
C2-set_2
V-set_CD47
Ig_PDGFR_d4
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
135878030
NCBI-ProteinID:
XP_065259651
LinkDB
All DBs
Position
4:142102183..142204493
Genome browser
AA seq
1340 aa
AA seq
DB search
MVMQQYLLTYTGVVFALYLHHIIRAIEVPLDPNIQNELPQPPTITKQSVKDYIVDPRDNI
FIDCEAKGNPIPTFSWTRNGKFFNVAKDPKVSMQRRSGTLVIDFRGGGRPEDYEGEYQCS
ARNEYGTALSSKILLQVSRSPLWPKEHLDLVEIDEGSPLTLKCNPPPGLPPPVVFWMSSS
MEPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKIQTKNPH
NETSFRNHTDMYSARGVMETTPSFMYPYGTSSNQIVLRGVDLLLECIASGVPAPDIMWHK
KGGELPTDKTKLENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDE
PQNLILAPAEDGRLVCRANGNPKPTIQWLVNGEPIESAPPNPSREVAGDTIVFRDTQIGS
SAVYQCNASNEHGYLLANAFVSVLDVPPRILSPRNQLIKVIQYNRTRLDCPFFGSPIPTL
RWFKNGQGSALDGENYQRHENGSLEINMARKEDQGIYTCVATNILGKAENQVRLEIKDPT
RIVRGPEDLTVKRGSLVRLDCRIKHDSTLKLTVTWLKDDTPLYIGNRMKKEDDGLIIYGV
AEKDQGDYTCVASTELDKDSAKAFLTVLAVVSAPTNRMTALPKERPERPRDLELTDLAER
SVRLTWIPGDDNNSPITDYVVQFEEDKFQPGLWHNHSRYPGSVNSAVLRLSPYVNYQFRV
IAVNEVGSSLPSLPSERYHTIGASPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLR
YIVKWRQRDTRESWSNETVRTTRHVVWNTPIYVPYEIKVQAENDFGRAPEPDIIIGYSGE
DYPKAPPTDIKLKVINSTAVSLQWSRVYPDTVQGQLKEYRAYFWRESSLLKNLWVSKKRQ
SVGFVGDRPRGIVSRLFPYSNYKLEMVVVNGRGDGPRSEIKEFTTPEGVPSVPRYFRIRQ
PNLETITLEWGHPEHPNGILTGYNLRYQAFNGTKTGRTLVETFSPNQTRFTLQRTDPISR
YRFFLRARTQVGDGESIVEESPAPLNEATPTPAATSLPTTTVSLTSTTTIATTTTTAATT
TTTVASTTTTTESAPTATTKQDFATNGSSIWNVKAFTNSNWANITWSHNFSAGTDFVVEY
ITSNNTVRSIPVKAQTPSSVQLADLTPGMTYQLWVFPKWSSPSENSYITFTTSSAYTKNH
VDIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVREKVEVLDHEDHKVDDPSFDY
RSLESDEDNKEPPGSHTSLDGTIKQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEE
TEGNESSEATSPVNAIYSLA
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atggtaatgcaacagtacctcctaacctacacaggagtagtgtttgctctgtaccttcat
catatcatcagagccatcgaagttcccctggatccaaatattcagaatgaattgcctcaa
cctcccacgattacaaagcagtctgtgaaggattatattgtagacccaagggataacatc
ttcattgactgtgaagccaaagggaaccccattcctactttttcttggacacggaatggg
aagttcttcaacgtggccaaggacccgaaggtctcgatgcagcgcaggtcggggacgctg
gtcatcgacttccgcggcggtgggaggccagaggattatgagggggaataccagtgctct
gctcgaaacgagtacgggacagcgctctccagcaaaatcctcctgcaggtttccaggtct
cccttgtggccaaaggaacatttggaccttgtagagatcgatgaaggatccccactgact
ttaaaatgcaacccaccccctgggctgccgcctcctgttgtcttctggatgagcagctcc
atggagccaatccaccaagacaagcgtgtctcccagggccagaacggcgacttatacttc
tccaacgttatgctgcaagacgcccaaactgactacagctgtaacgcgcgcttccacttc
acccacaccatccagcagaaaaacccttacacgctcaagatccaaaccaagaatccccat
aatgaaacgtcttttcgaaatcacactgacatgtacagtgcccgaggggttatggaaacg
acccccagcttcatgtatccctacgggacctcaagcaaccagatagtgctgagaggggtg
gacctcttactcgagtgcattgcttcaggagtaccagcaccagacatcatgtggcacaag
aaaggaggagagctcccaacagacaaaaccaagttggaaaattttaacaaggcccttcgc
atcaccaacgtctctgaggaagactctggggaatacttctgcttagcgtccaacaaaatg
ggcagcatccgccacactatctcagtgagagtgaaggcggccccttactggttggacgaa
ccacaaaaccttattttggcccccgctgaggatggtagactcgtgtgtcgagccaacggg
aacccgaagcctacaatccagtggctggtgaacggagagcccatagaatctgctcctccc
aacccaagtcgggaagtggccggagacaccattgtatttcgggatacccagattggcagc
agtgccgtgtaccaatgtaacgcttccaacgaacatggctaccttctggctaatgccttc
gtcagcgttctggatgtgcctccccggattctttccccacggaaccagctgatcaaagtg
attcagtacaacaggacccgccttgactgcccattctttggctccccgatccccactttg
cgctggtttaagaatggtcagggaagcgccctggatggagagaactaccagaggcatgaa
aatgggagcttggaaataaacatggctcggaaggaggaccagggaatctacacctgcgtc
gccaccaacattctgggtaaagcagagaaccaggttcgtttggagatcaaagacccaact
aggatcgtgagagggccagaagatctgactgtaaagaggggctccctggttcgattagac
tgccgtataaaacatgactctacgctgaaactcacagtcacctggctgaaagatgatacg
cctctgtacattggaaacaggatgaagaaggaagatgacggtttgataatctatggcgtg
gctgaaaaagatcaaggagattatacgtgtgtagccagtactgaactggacaaagactct
gccaaagcattcctcaccgtgctagctgtcgtgtctgctccaactaatcgtatgacagcc
ttacccaaagaacgacctgagcggcctcgtgacctggagctgacagacctggcggaaagg
agtgtgcgcttgacatggatacccggtgatgacaataacagcccgatcacagattacgtg
gttcagtttgaagaggacaagttccaacctgggttgtggcataaccattcccgttaccca
gggagcgtgaactcagctgttctgcgcctctcgccctatgtcaactaccagttccgagtg
atagctgtgaatgaagtggggagcagcctccccagccttccctctgaacgataccatact
attggggcaagtccagaaatcaacccaacaggagttcaaggagcagggactcagaaaaac
aacatggagataacttggaccccactgaatgcaactcaagcttatgggcccaacctcagg
tacatagtgaagtggaggcaaagggatacacgggagagctggagcaatgagacagtgaga
accacaaggcatgttgtctggaatacacccatctatgtgccctatgagatcaaagtgcaa
gcagagaatgacttcgggagagctccagagcctgacattatcatcggctactcaggggaa
gattatcccaaggctccccccactgatattaagctaaaagtaataaacagcacagcagtc
agtctccaatggagccgagtatacccggataccgtccagggacaacttaaggaatacaga
gcctatttctggagagaaagtagtttgctgaagaacctgtgggtctccaaaaaaaggcag
tctgtgggttttgttggagaccgaccaaggggcatagtgtcccggctgtttccttacagc
aactacaaactggagatggttgtagtcaacgggagaggagatgggcctcggagtgaaatt
aaggagttcacaacacctgaaggagtacccagtgtccccaggtatttcagaatccgacag
cctaacctggaaaccatcactttggaatggggccaccctgaacatcccaatggaattctc
actggatacaaccttagataccaagcctttaatggaaccaaaacgggcagaacgctggta
gagaccttctcccccaaccaaacaaggtttacgctccagaggacagaccccatatcgcgc
tatagattcttcctgcgtgctaggacacaggtgggagatggagaatccattgtggaagag
tcgccagccccactgaatgaagccactccaaccccagctgcaacctcgttgcctacaact
acagtcagtctaaccagcactacaaccatcgccacaaccaccaccacagctgccacaacc
actacaaccgtcgccagcactacaaccactacggagagtgctccgacagccaccactaag
caggactttgccacgaatggatcatccatatggaacgtaaaagctttcactaacagtaac
tgggcaaacatcacctggagccacaatttttctgctggaactgactttgtggttgagtac
atcaccagtaacaatacagtgagatctatccctgttaaagctcagaccccttcctctgtg
cagctggctgacctgacccccgggatgacgtaccagttgtgggtttttcccaaatggtct
agccccagcgaaaactcttacataacctttacgacaagctcagcttataccaagaaccac
gtggacattgcaacccagggctggtttattgggctgatgtgtgccattgcgcttctggtt
ctgattttgttgatagtgtgcttcattaagagaagcagaggcgggaaatatccagtgcgt
gaaaaagttgaagtcctggatcatgaagaccacaaagtagatgatccatcatttgactac
aggtctcttgaaagcgatgaagacaacaaggaaccaccaggcagccacacctccttggat
ggcaccataaagcaggaaagcgatgatagcttggtggattatggagaggggggcgaaggg
cagttcaatgaggacggctcctttattggccagtacacagtcaagaaggacaaggaggag
acagaaggcaacgagagttcagaagccacatcccccgtcaatgctatctactccctggcg
taa
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