Emys orbicularis (European pond turtle): 135878151
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Entry
135878151 CDS
T11511
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2 isoform X1
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135878151 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eob03019
]
135878151 (CPSF2)
Messenger RNA biogenesis [BR:
eob03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
135878151 (CPSF2)
U7-dependent histone pre-mRNA processing factors
135878151 (CPSF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
135878151
NCBI-ProteinID:
XP_065259806
LinkDB
All DBs
Position
4:complement(31656937..31676876)
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AA seq
783 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDSLRKYVHQVDAVLL
SHPDPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDSKNSVILTYRTT
PGTLARFLIDNPSEKVIDIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEVDIDSS
DESDVEEDIDQPSVHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISATESMEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLSESCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELREDGEDL
EMQVDMPSSDSSVIAQQKAMKSLFDDDDKEICEESEIIPTLEPLPPHEVIGHQSVFMNEP
RLSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQY
AIV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgacctccattatcaaattgactacgctctcaggggttcaggaggaatctgctctctgc
tatctgctgcaggtagacgagtttcgttttttattggactgtggctgggatgagaatttt
tcaatggatatcattgattctctaaggaaatatgtacaccaggttgatgcagtgctactt
tctcaccctgatcctctacatcttggtgctctcccatatgcagttggaaaaatgggttta
aattgtgctatttatgcaaccattcctgtgtataaaatgggacaaatgtttatgtatgat
ctctatcagtctcgccacaatacagaagatttcactctctttacattggatgatgtagat
gcagcttttgataaaatacagcagctcaagttctctcagattgtgaacttgaaagggaaa
gggcatggtctttctattacaccactgccggctggtcacatgataggaggcacaatttgg
aagattgtcaaagatggagaagaagaaattgtatatgctgttgacttcaaccacaagagg
gagatccatttaaatggatgttctctggaaatgttgagcaggccttcgctgcttatcaca
gattcctttaatgctacttatgtacaacccagacggaagcaaagagatgaacaactgtta
accaatgtcttggagacgttgcgaggtgatggaaatgtgttaatagccgtggatacagca
ggcagagttctggaacttgcccaacttcttgatcagatttggagaacaaaagatgcagga
ttaggagtctactctttagcacttttaaataatgtcagctacaatgtagtggagttttct
aaatcacaggttgaatggatgagtgacaaactgatgaggtgttttgaagacaagaggaac
aatccatttcaattccgccatctctcattatgtcatggtctttctgacctggctcgagtg
cctagcccaaaagtcgtgcttgccagccagcctgatttggaatgtgggttttcaagagat
ctctttatacagtggtgtcaggattccaaaaactctgtcattttaacttataggaccaca
cctgggacactagcacgatttcttatagataacccttctgaaaaagttatagatatagag
ttgaggaaacgtgtcaaacttgaagggaaggaacttgaggagtacctagaaaaggagaaa
ctaaagaaagaagcagctaaaaagttagaacagtccaaagaggtagatattgattccagt
gatgagagtgatgttgaagaggatattgatcagccatcagtgcataaaactaaacatgac
ttgatgatgaaaggtgaaggaagccgaaaaggaagcttcttcaaacaggccaagaagtct
tatccgatgtttccagccccagaagaaagaattaaatgggatgaatacggggagattatc
aagcctgaggatttcctagttccagagcttcaagcaactgaagaagaaaagagtaaatta
gaatctggtctgacaaatggagatgagcctatggaccaagatttatcagatgttcctacc
aaatgtatttcagcaacagaatcaatggaaataaaagccagagttacatacatagactat
gaaggacgctcagatggtgactccattaaaaaaatcattaaccagatgaagccacgacag
ttgatcattgtccatggtccacctgaggccagccaggacctttcagagtcttgcagagct
tttggtgggaaagatattaaagtttatatgcctaaactgcatgaaactgtagatgcaacc
agtgagactcacatctatcaggtcaggttaaaagattctctggtcagctcccttcagttc
tgtaaagcgaaagatgcagaactagcttggatagatggtgtcctggacatgcgggtttca
aaagtggacaccggagtcattctggaagaaggagagctgagagaagatggagaagacttg
gaaatgcaagtggatatgccttcttctgactccagtgttattgcacagcaaaaggctatg
aagagtttgtttgatgatgatgataaggaaatatgtgaggagagtgagatcattcctact
ctagaaccactgccaccacatgaggttattggacatcagtctgttttcatgaatgagcca
agactgtctgattttaaacaagttcttctgcgagaaggaattcaagctgaatttgtagga
ggggtgcttgtgtgcaacaacctagtggctgttcgtaggactgaaacagggcgcattgga
ttggaaggctgtctttgccaggacttctatagaataagagatcttttatacgagcaatat
gccattgtctaa
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