Emys orbicularis (European pond turtle): 135878172
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Entry
135878172 CDS
T11511
Symbol
PDS5B
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B
KO
K11267
sister chromatid cohesion protein PDS5
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
135878172 (PDS5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eob03036
]
135878172 (PDS5B)
03400 DNA repair and recombination proteins [BR:
eob03400
]
135878172 (PDS5B)
Chromosome and associated proteins [BR:
eob03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
135878172 (PDS5B)
DNA repair and recombination proteins [BR:
eob03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
135878172 (PDS5B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
EnP1_C
Motif
Other DBs
NCBI-GeneID:
135878172
NCBI-ProteinID:
XP_065259835
LinkDB
All DBs
Position
1:complement(320440254..320692776)
Genome browser
AA seq
1450 aa
AA seq
DB search
MAHSKTRANDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSISDLSEHVFDLILELYNIDGHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMF
GAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKVRSH
DPEEAIRHDVIVSIVTAAKKDLLLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYS
LQSEAGKEAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETNERMKCLYYL
YATLDSNAVKALNEMWKCQNLLRHQVKDLVDLIKQPKTDASSKAIFSKVMVITRNLPDPG
KAQDFMKKFTQVLEDDEKIRNQLEMLVSPSCSCKQAEGCVREITKKLGNPKQPTNPFLEM
IKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTH
PISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKAKK
GPPRQAKYAIHCIHAIFSSKETQFAQIFEPLHKSLDPSNLEHLITPLVSIGHIAMLAPDQ
FAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWAPDEEVSPETLVKIQAIKMMVRWLLGMK
NNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAASAIVKLAQEPCYHEIIT
LEQYQLCALAVNDECYQVRQIFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQ
CLVKNINVRREYLKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDIKEC
LWFILEILMSKNENNSHAFIRKMVENIKQTKDAQGPDDPKMNEKLYTVCDVAMNIIMSKS
TTYSLESPKDPVLPARYFTQPDKNFSNTKNYLPPEMKSFFTPGKPKAANVLGAVNKPLSA
AGKQSQSKSSRMETVSNASSSSNPSSPGRIKGRLDSTEMDHSENEDFTMASPLPGKKTDK
RDDSDLVRSEMEKPRGRKKATITDSEEKLGIDDLNKLGQEQKLRGSQRGRKRAAVVSESD
EAQWPEEKRLKEDVLESEDEQNSPPKKGRRGRPPKAASGGTPKEEPAAKTSKRGRKKAVP
VASVVEEEEEEEEEGQSENVEQKPKGRQYRTPRRAQQRVEPSETSAVESTQSTPQKRRGR
PPKTPPSQQKKGRAGRTKQAASKENESSEEMDIFQGSSPISDDIPQEEVMEEEEVSTISV
RRRTSKRERR
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atggctcattcaaagacacgagccaatgatggaaaaattacgtatcctccaggagtcaaa
gaaatctctgataaaatatctaaagaagagatggtgaggcggttaaagatggttgtgaaa
acattcatggatatggatcaggactcggaagaagaaaaggagctgtatctaaatcttgca
ttacatcttgcttcagatttttttctcaaacaccctgataaagatgtgcgcttgctggta
gcatgttgccttgctgatattttcagaatttatgctcctgaagctccatacacctcacca
gataaactgaaagatatatttatgtttataacaaggcaactgaaaggattagaagataca
aaaagcccacagttcaatagatatttttatttacttgagaatattgcttgggtcaaatct
tataatatatgctttgagctagaagacagcaatgaaattttcacacagttgtacagaacg
ctgttttccgtaataaacaatggtcataatcaaaaagtacacatgcacatggtggatttg
atgagctctatcatttgtgaaggagatactgtgtctcaggagcttttggatactgtttta
gttaatctagtgccagcacataagaatttaaacaagcaagcatatgacttggcaaaggct
ttactaaagaggacagctcaagctattgaaccgtacattactaacttctttaatcaggtg
cttatgcttgggaaaacttctatcagtgatctgtcagagcatgtctttgacttaattctg
gagttgtacaatattgacggtcatctcttgctttctgttttaccgcagcttgaattcaaa
cttaagagcaatgacaatgaagaacgcctgcaggttgtaaaactactagcaaaaatgttt
ggggcaaaggattcagagttggcatctcaaaacaaaccactttggcagtgctacttgggg
aggtttaatgatatccatgtacctatccggcttgaatgtgtgaaatttgctagccactgc
cttatgaaccatccagatctagcaaaagatttaacagaataccttaaagtaaggtcacat
gaccctgaagaagccattaggcatgatgttattgtatccatagttactgctgctaaaaaa
gatcttttgcttgtaaatgatcacctacttaattttgtgagagagagaacactggacaaa
cggtggagagtgagaaaagaagctatgatgggacttgcccagatatacaagaaatattca
ttacagtcagaagcggggaaagaagctgcaaaacaaatttcatggatcaaggacaaactg
ctgcatatatattatcaaaacagtattgatgaccgattgcttgttgaacgcatctttgct
caatatatggtccctcacaatttggaaacaaatgaacgaatgaaatgtttatattacctt
tatgcaacactggactcaaatgctgtgaaagcattgaatgaaatgtggaaatgtcaaaat
ctgctacgacaccaggtaaaggacttggtcgacttaattaaacagcccaaaacagatgcc
agcagtaaagctatattctcaaaagtgatggtcattacaagaaacttgccagatcctggt
aaggctcaggatttcatgaagaagttcactcaagttctggaagatgatgagaaaataaga
aaccagttagaaatgcttgttagcccatcatgttcttgcaagcaggctgaaggatgtgtg
cgagaaattacaaagaagttgggcaatcccaaacaacctacaaaccctttcctggaaatg
attaagtttcttctagagaggatagctcctgtgcacattgatacagaatcaatcagtgcc
cttatcaagcaagtaaacaagtctatagatggaacagcagatgatgaagatgagggtgta
cctactgatcaggcaatcagagcaggtcttgaattgcttaaggtcctgtcatttacacac
cctatctcatttcattcagctgaaacgtttgaatcccttctggcttgcctgaaaatggat
gatgaaaaggtggcagaagctgcattacaaattttcaaaaacacaggaagtaaaattgaa
gaggactttcctcacatcagatctgctttgctcccagtcttgcatcacaaagctaaaaaa
ggcccccctcgtcaggccaagtatgccattcactgcatccatgcaatattttccagcaaa
gaaacacagtttgcacagatatttgagccactgcataagagccttgatccaagcaacctt
gaacatctcattacaccattggtttctattggtcatatagccatgctggccccagaccaa
tttgctgcccctttgaaatccttggtagccacctttattgttaaagatttgctaatgaat
gacaggcttcctgggaaaaagacaactaaactttgggctccagatgaggaagtttctcca
gaaacgcttgtcaaaattcaggccattaagatgatggttcgatggttgctaggaatgaag
aataaccacagtaaatcaggaacttctactctgagattgctaacaacaatattgcacagt
gatggagacttgacagaacagggaaaaattagtaaacccgatatgtctcgtctgaggctg
gctgctgctagtgctattgtgaagctggcacaggaaccttgttaccatgaaatcatcaca
ttagaacaataccagctgtgtgcattagccgttaatgatgagtgttaccaagttagacaa
atatttgctcagaaactccacaaaggcctttcccgactacggctccctctggaatatatg
gccatttgtgcactgtgtgcaaaagacccagtgaaggaaagaagagcacatgctaggcag
tgccttgtgaaaaacataaacgtgagaagagaatatctgaagcagcatgcagcagtgagt
gaaaaactattgtcacttctaccagaatatgttgttccatatactatccaccttctggca
catgacccagattatgtgaaagtccaggatattgaacaacttaaggacattaaagagtgc
ctgtggttcatactggaaatactgatgtctaaaaatgaaaataatagtcatgcgtttatc
agaaaaatggtggaaaacattaagcagacaaaagatgctcaaggaccagatgatccaaaa
atgaatgaaaaactctacacagtttgtgatgtagcaatgaatatcattatgtcaaagagt
acaacatacagtttggaatcccctaaagacccagtacttccagctcgatatttcacgcag
cctgacaagaatttcagtaacaccaaaaattatctccctccggaaatgaaatcttttttc
actcctggaaagcccaaagcagccaatgttcttggagcagttaataagcctctttcggca
gcaggcaagcagtcccaatccaaatcttcacgaatggaaactgtaagcaatgccagcagc
agttcaaatccaagctctccaggaaggatcaaagggaggcttgacagtactgagatggac
cacagtgaaaatgaagatttcacaatggcttcacctttaccaggaaagaaaactgacaag
agggacgactctgatcttgtaaggtcagagatggagaagcccaggggtagaaagaaagca
accatcacagactcagaagagaagttgggcatagatgacctgaataaattggggcaggaa
cagaaacttagagggagtcagcgggggaggaagagagctgcagttgtttcagaatctgat
gaagcacagtggccagaggaaaagaggctaaaggaagatgtattagaaagtgaggatgaa
caaaacagtccaccaaagaagggaagaagaggacgacctcctaaagcagctagtgggggt
acaccaaaggaagaaccagcagcaaagacatctaaaaggggcagaaaaaaagcagtgccc
gtagcatcagtagtggaggaagaggaagaggaggaggaggaagggcaaagtgaaaacgtg
gaacagaagccaaaaggcaggcaatacaggacaccaagaagagcgcaacaaagagtagaa
ccatctgaaactagtgcagttgaatcaacacagtctacaccacagaaaagacgaggaagg
ccaccaaaaacaccaccatcacagcaaaaaaaaggccgtgctggacgcaccaaacaagca
gcaagtaaagaaaatgaatctagtgaagagatggatatatttcagggcagttctcctatc
agtgatgacattccccaagaagaagtaatggaggaagaggaagtttccactatcagtgta
cgtcgcagaacttccaaaagagagaggcgatga
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integrated database retrieval system
