Emys orbicularis (European pond turtle): 135878478
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Entry
135878478 CDS
T11511
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob04514
Cell adhesion molecule (CAM) interaction
eob04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
135878478 (LRRC4C)
04517 IgSF CAM signaling
135878478 (LRRC4C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eob04515
]
135878478 (LRRC4C)
Cell adhesion molecules [BR:
eob04515
]
Immunoglobulin superfamily
NGL family
135878478 (LRRC4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
LRR_1
LRR_14
V-set
Ig_2
LRR_9
LRRNT
LRR_LRWD1
Ig_6
Sp38
Herpes_gE_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
135878478
NCBI-ProteinID:
XP_065260228
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All DBs
Position
4:80787415..80789328
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AA seq
637 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLTAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLRLERIHLHHN
PWNCNCDILWLSWWIKDKAPSNTACCARCNTPPNLKGRYIGELDLNYFTCYAPVIVEPPA
DLNVTEGMAAELKCRASTSLTSVSWITPNGSVMTHGAYRVRIAVLSDGTLNFTKVTVQDT
GLYTCMVSNSVGNTTASATLNVTALDNGYTYFSTVTVETMEPSQDEARTTEQIGPTPVID
WETTNVTTSLTPQSTRSTEKTFTIPVTDASNGIPGIDEVMKTTKIIIGCFVAITLMAAVM
LVIFYKMRKQHHRQNHHAPTRTVEIINVDDELTGDTPIESHLPMPAIEHEHLNHYNSYKS
PFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtgctactggctcttcaacttcttgtggtggctggt
ctagtcagggctcaaacttgcccttctgtctgctcctgcagcaaccagttcagcaaagtg
atttgtgtgcggaagaatctgagagaggttccagacggcatctccaccaacacacggtta
ttgaatctccatgagaaccagatccaaataattaaggtgaatagcttcaaacatttgaga
cacctggaaatcttgcagctgagtagaaatcacattagaaccattgaaataggggccttc
aatggtctggccaatctcaacactctggaactttttgacaatcgtcttaccaccatccct
aatggggcttttgtatacctgtcaaaactgaaggagctttggttgagaaacaatcctatt
gagagcatcccttcttatgcttttaacagaatcccttccctacgtaggttggatttgggg
gaactaaaaaggctttcatacatctcagaaggtgcctttgaaggtctatccaatttgagg
tatttgaaccttgctatgtgcaaccttcgagagatccctaacctcacaccactcataaaa
ctggatgagttagatctttctgggaaccatctgacagccatcaggccggggtccttccaa
gggttaatgcatcttcaaaaattgtggatgatacagtcccagattcaagtgattgaaagg
aatgcctttgataaccttcagtcactggtggaaatcaacctggcacacaacaacctaaca
ctactgcctcacgatctcttcacaccactccgcctagaaaggatccacctgcaccacaat
ccttggaattgcaactgtgacattctttggctcagctggtggattaaggacaaagcaccc
tccaatactgcatgctgtgctcgctgcaacacacctcccaatttgaaaggaaggtacatc
ggtgagctggacctgaattatttcacgtgttatgctccggtgatagtggagccaccagca
gacctcaacgtcacagaaggcatggctgcagaactgaaatgccgagcatcgacctccctg
acctctgtatcttggattactccaaatggatcggttatgacgcatggggcatacagagtt
cggattgctgtgctcagtgatggcacattaaattttacaaaggtgaccgtgcaagacacg
ggcttgtatacctgcatggtgagtaactctgttgggaatactacagcttctgccacactg
aacgtcactgcactggacaatggttacacatacttttcaactgtcacggtagagactatg
gaaccttctcaggatgaggcacggaccacagagcagattgggcccacaccagttattgac
tgggagaccaccaatgtgacaacttctcttactccacagagcacaaggtcgacagagaaa
acgtttaccatcccagtgacagatgcaagcaatgggatcccaggaatagatgaggttatg
aagactaccaaaatcataattggttgttttgtggctatcactctcatggccgctgtgatg
ctggtaatattctacaaaatgaggaaacagcatcaccggcagaaccaccatgctccaaca
cggactgtagagatcattaacgtggatgatgagcttacaggtgatacacccatagagagt
cacttgcccatgccggcgatagagcatgagcacctaaatcattataactcttataagtct
cctttcaaccacacaacaacagttaacacaataaattcaatacacagttcagtgcatgaa
ccgttattgatccgaatgaactcaaaagacaatgtacaagagactcagatctaa
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