Emys orbicularis (European pond turtle): 135878904
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Entry
135878904 CDS
T11511
Symbol
GABRG1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-1 isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob04080
Neuroactive ligand-receptor interaction
eob04082
Neuroactive ligand signaling
eob04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
135878904 (GABRG1)
04082 Neuroactive ligand signaling
135878904 (GABRG1)
04519 Cadherin signaling
135878904 (GABRG1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
eob04040
]
135878904 (GABRG1)
Ion channels [BR:
eob04040
]
Ligand-gated channels
GABA-A
135878904 (GABRG1)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
135878904
NCBI-ProteinID:
XP_065260714
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Position
5:97174369..97249066
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AA seq
467 aa
AA seq
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MDSWRRPSFPWPLCSPCSRGRLLLLLLTVRLGNCADKADDEDDEDLTVNKTWVLAPKIHG
ADVTHILDSLLQGYDSKLRPDIGVRTTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWYD
SRLKFNSSMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTLR
LTINAECYLQLHNFPMDEHSCPLEFSSYGYPRNEIEYKWKKTSVEVADPKYWRLYQFAFV
GLRNTTEISHTLSGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA
RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFTSNK
KGNKEKEKSSKHKPAKSTAIAVRPRSTLIAINNINHLQQRDEDYGYECLEGKDCTSFFCC
FEDCRTGSWREGRIHIRVAKIDSYSRIFFPTAFALFNLVYWIGYLYL
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggattcatggaggcgtccctccttcccgtggcctctgtgcagtccctgcagcaggggg
aggcttctgctcctgttattgaccgtgcgtttggggaactgtgctgataaagcagatgat
gaggatgatgaagatctaacagtgaacaaaacatgggtacttgcaccaaagattcatggt
gcagatgtcactcacatactggactccttacttcaaggctatgacagtaaacttcggcca
gatattggagtgagaactacggtaattgaaacagatgtctatgttaacagcattggccca
gttgatccaatcaatatggaatacaccatagatataatttttgcccagacttggtatgat
agtcgcctaaagtttaacagctcaatgaaagtgcttatgcttaatagcaatatggttgga
aaaatttggattccagacactttcttccggaactcaagaaaatctgatgctcattggatc
accactccaaatcgtttgcttcgaatctggagtgatggacgagtattatatactctgagg
ttgacaattaatgctgaatgttatcttcagcttcataactttcctatggatgagcattcc
tgtcctctggagttttcaagctatggatatcccagaaatgaaattgaatacaaatggaag
aaaacctctgttgaagtcgcagatcccaaatactggagattataccagtttgcatttgta
gggttacgaaatacaactgaaatttctcatactctgtctggggactatattatcatgaca
atcttctttgatctgagcagacgcatgggatactttactattcagacatacattccttgt
atactaacagttgttctttcatgggtctcattttggattaataaagacgctgtgcctgca
aggacatcattaggtattactacagtattgactatgacaacactaagtacaattgctagg
aaatctctccccaaggtctcatatgtgacagcaatggacctttttgtttcagtttgcttc
atttttgtgtttgctgccttgatggaatatggcaccttgcattacttcaccagcaacaaa
aaagggaacaaagagaaagagaagtcatcaaaacacaagccagctaaatcgactgcaatt
gctgtccgtcctagatcaacattaatagcaattaacaacattaatcacctccaacagcgt
gatgaggattatggatatgagtgcctggaaggcaaagactgcaccagctttttttgttgt
tttgaagactgccgcacaggttcttggagagaaggaagaatacacatccgtgttgccaaa
atcgactcctattctcgaatcttctttccaacagcctttgccttgttcaatcttgtttat
tggattggttacctttacctataa
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