Emys orbicularis (European pond turtle): 135878964
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Entry
135878964 CDS
T11511
Symbol
SMAD1
Name
(RefSeq) mothers against decapentaplegic homolog 1 isoform X1
KO
K04676
mothers against decapentaplegic homolog 1
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob04081
Hormone signaling
eob04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
135878964 (SMAD1)
09133 Signaling molecules and interaction
04081 Hormone signaling
135878964 (SMAD1)
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Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
135878964
NCBI-ProteinID:
XP_065260804
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Position
5:57419039..57458685
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AA seq
465 aa
AA seq
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MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQ
PSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEV
CINPYHYKRVESPVLPPVLVPRHSEYNPQHSLLAQFRNLGQNEPHMPHNATFPDSFQQPN
SHPFPHSPNSSYPNSPGSSNSTYPHSPASSDPGSPFQMPADTPPPAYLPPEDQMTQDGSQ
PMDTNMMAPSIPPEINRGDVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFT
DPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNC
NYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRMSFVKGW
GAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgacaagcttattctccttcacaagcccagcagttaagaggctgctgggatgg
aagcaaggggatgaagaagaaaaatgggcagagaaagctgttgatgcattagttaaaaaa
ctaaagaagaaaaaaggtgctatggaggaactggaaaaagcattaagctgtccaggtcag
cccagcaactgtgttacaattccccgttccctggatggcaggcttcaagtttcgcaccgg
aaagggctaccacatgtaatttactgtagagtgtggcgctggccagacctccagagccat
catgaactgaaaccactggaatgctgtgagtttcccttcggttcaaaacagaaggaggtt
tgcatcaatccctatcactacaaacgggtggagagtcctgttcttcctccagtgctggtt
ccaagacacagtgaatacaaccctcagcacagtcttttggctcaattccgcaacttggga
caaaatgagcctcacatgccacacaatgccacttttccggactctttccagcaacccaac
agtcatccattcccccattcccccaatagtagttatcccaactcccctggaagcagcaat
agcacctatccacactctcctgctagctcggatccaggaagtcctttccagatgccagct
gatactccccctcctgcttacctgcctccggaagatcagatgacacaggatggctcacag
ccaatggacaccaacatgatggcaccctcaattcccccagaaataaacagaggagatgtt
caggcagttgcttatgaagagccaaaacactggtgttctattgtctactatgagctgaac
aatcgtgttggggaggcatttcatgcctcctccaccagcgtgttggtagatggttttact
gatccttcaaacaacaagaacagattttgccttgggctgctctctaatgttaaccggaat
tccaccattgagaacaccaggcggcatattggcaaaggagttcacctctattatgttggg
ggagaagtgtatgctgaatgccttagtgacagcagtatttttgttcaaagtcgaaactgc
aactatcaccatgggttccatccaaccacagtttgtaaaattcccagtggctgcagtttg
aaaattttcaacaaccaagagtttgctcagcttctggctcaatcagtgaaccatggcttt
gaaacagtgtatgagcttactaagatgtgcactatccgtatgagttttgtaaagggttgg
ggagccgaatatcatcgccaagatgtaacgagcactccgtgctggattgagatacacctg
catggcccccttcagtggctggataaagttcttactcagatgggctcacctcataatcct
atttcctctgtgtcttaa
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