KEGG   Emys orbicularis (European pond turtle): 135879457
Entry
135879457         CDS       T11511                                 
Symbol
RNF4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
eob  Emys orbicularis (European pond turtle)
Brite
KEGG Orthology (KO) [BR:eob00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:eob04121]
    135879457 (RNF4)
Enzymes [BR:eob01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     135879457 (RNF4)
Ubiquitin system [BR:eob04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    135879457 (RNF4)
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-RING_4 Prok-RING_4 zf-rbx1 zf_RING_Vps8 zf-UDP zf-C3HC4_4 Rtf2 zf-RING_11 zf-RING_Vps41 zf_RING_Vps8_fungal zf-RING_6 zf-P11 zf-RING_10 zf-RING_16 Zn_ribbon_6 TRAF3_RING IBR_1 Ribosomal_L25p zf-ANAPC11 Serinc DZR
Other DBs
NCBI-GeneID: 135879457
NCBI-ProteinID: XP_065261513
LinkDB
Position
5:complement(126288505..126319756)
AA seq 211 aa
MVSVPLTFFCILYSRNTMSTTQRKRRGGAINSRQTRKRNRLVASATEMASEAEPIELEES
AGEEVVDLTCESSEPVVVDLTHNDSVVIVEENQRQRRNLGLRSQQQSDSCVLSSDDEDES
RDNDVYVTNKVSGDLETLEDETASSRPSGTVSCPICMDGYSEIVQSGRLIVSTKCGHVFC
SQCLRDSLRNANSCPTCRKKLNHKQYHPIYI
NT seq 636 nt   +upstreamnt  +downstreamnt
atggtatctgtacctcttacttttttctgtattttatattcaagaaacaccatgagcaca
actcaaagaaaacgtcgtggaggagccatcaattctaggcaaactcgaaaacgaaacaga
ctggtagcttcagctacagaaatggcttcagaagcagagccaatagaacttgaagaaagt
gctggtgaagaagtagtagatctcacatgtgaatcttctgaacctgtagtagttgatcta
actcacaatgattctgttgtgattgttgaagagaatcaacgtcagcggagaaatcttggg
ttaagaagccaacagcaatctgacagctgtgtattaagtagtgatgatgaagatgaatca
agagataatgatgtatacgtaacaaacaaggtgtctggagatttagaaacactggaggat
gaaactgcaagttcaaggccttcaggtaccgttagttgtccaatttgcatggatggatac
tcagagattgtacaaagtggacgacttatcgtgtcaaccaaatgtggccatgtcttctgt
agtcagtgcctccgtgactcccttagaaatgctaactcttgcccaacttgtaggaaaaaa
ctcaatcacaaacagtaccatccaatttatatataa

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