Emys orbicularis (European pond turtle): 135879747
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Entry
135879747 CDS
T11511
Symbol
DHX15
Name
(RefSeq) ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135879747 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eob03041
]
135879747 (DHX15)
03009 Ribosome biogenesis [BR:
eob03009
]
135879747 (DHX15)
Enzymes [BR:
eob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135879747 (DHX15)
Spliceosome [BR:
eob03041
]
Complex A
U2 snRNP components
U2 related factors
135879747 (DHX15)
Complex B
135879747 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
135879747 (DHX15)
Ribosome biogenesis [BR:
eob03009
]
Eukaryotic type
90S particles
Helicases
135879747 (DHX15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
AAA_29
Cas3-like_C_2
Flavi_DEAD
AAA_25
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
135879747
NCBI-ProteinID:
XP_065261876
LinkDB
All DBs
Position
5:110794865..110864886
Genome browser
AA seq
766 aa
AA seq
DB search
MSKRHRLDLGDDYTSSKKRAMADGKDRDRDRDREDRSKDRDRDRDRERDRDRERDKEKDL
RPSSNSMLLVGGGLPPLKPAILPQGINPFTNLPHTPRYYEILKKRLQLPVWEYKERFTDI
LIRNQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEM
DVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLAT
DILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPER
DYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLY
STLPPQQQQRIFEPPPPKKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNP
RIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGS
VVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDP
QLAKMVIASCDYNCSNEILSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLN
VYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINI
RKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRT
CTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccatcggctagacctgggggatgactacacctccagcaagaagcgcgcc
atggctgacgggaaggatcgagatcgtgaccgggatcgtgaagatcgttctaaagaccgt
gacagagatcgtgacagagagagagatcgtgacagagagagagacaaggaaaaagatttg
cgtccttcatctaattctatgctgcttgttggtggtggattaccacctttaaaaccagca
atacttccacagggtattaatccattcacaaacctaccacatacacctcgatactatgaa
atcctaaagaagcggcttcagctccctgtctgggagtataaggaaagatttacagatatc
ctgattaggaaccagtcttttgtactggttggagagaccgggtctggtaaaacaacacag
atccctcagtggtgtgttgactacatgcggtctttacctggacctaagagaggtgtagct
tgtacccagcctaggagagtagctgcaatgagtgtggcacaacgagttgctgatgaaatg
gatgtgatgttgggccaggaagttggttactctattcgatttgaagactgcagtagtgca
aaaacaattctgaagtatatgactgatggtatgttacttcgtgaagctatgaatgaccct
ttgctggagcgctatggtgttataattcttgatgaggcccatgaaagaacattggctact
gatattttgatgggagttctgaaagaggttgtaaggcaaagatctgacttgaaggttata
gttatgagtgctactctagatgctggcaagttccagatttattttgataattgtcctctc
ctaactatccctggtcgtacccatcctgtggagattttctatactccagagccagagagg
gattaccttgaggcggctattcgaacagtaatacagattcacatgtgtgaagaagaggaa
ggagatcttctactttttcttactggacaagaggagattgatgaagcctgtaagaggata
aagcgtgaaattgatgatttgggtcctgaagtgggtgacatcaaaatcattccattatat
tccacgcttcccccacagcaacaacagaggatttttgaaccacctcctcctaaaaaacca
agtggagcaataggaagaaaggttgtcgtatccactaatattgctgaaacatcattaaca
atagatggtgttgtgtttgtgattgatcctggatttgctaagcaaaaggtatacaatcct
cgtattagagttgaatctctattggtgacagcgatcagcaaagcatctgctcagcagaga
gctggccgtgctggtcgtactaggccaggcaagtgcttcaggctttatacggagaaggcg
tacaaaactgaaatgcaggacaacacctaccctgaaattctgagatctaatttgggatct
gtggtgttacagctgaaaaaacttggtatagatgacttggtgcactttgattttatggac
ccaccagctcctgaaactttgatgagagccctagagcttttgaattatctagccgcttta
aatgatgatggagacctgactgaattgggatccatgatggctgaatttccactggatcca
cagctggctaaaatggttattgcaagttgtgactacaactgttctaatgagatcctatct
attactgccatgttgtcagtcccacagtgttttgttcgccccacggaagccaagaaagca
gcagatgaagccaagatgaggtttgcccacatagatggagatcatttgaccttgctgaat
gtctaccatgctttcaaacaaaatcatgagtcggttcagtggtgttatgacaacttcatt
aactacaggtccctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggat
agatttaatttgcctcgtagaagtacagactttacaagcagagactattatatcaatata
agaaaggctttggttactgggtattttatgcaggtggcacatttggagcgaacagggcat
tacttaacagtgaaggacaaccaggtggtgcagttacatccttccacagttcttgatcac
aaacctgaatgggtgctttataatgaatttgtccttacaacaaagaactacatccgcaca
tgtacagatattaagccagaatggttggtgaaaattgcccctcaatattatgacatgagc
aatttcccacagtgtgaagcaaagagacagttggatcgcatcattgccaaacttcagtcc
aaggaatactcacagtactga
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