Emys orbicularis (European pond turtle): 135880067
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Entry
135880067 CDS
T11511
Symbol
RNF38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
eob Emys orbicularis (European pond turtle)
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eob04121
]
135880067 (RNF38)
Enzymes [BR:
eob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135880067 (RNF38)
Ubiquitin system [BR:
eob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135880067 (RNF38)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
VPS18_RING_C
zf-ANAPC11
zf-RING_5
zf-RING_16
FANCL_C
Motif
Other DBs
NCBI-GeneID:
135880067
NCBI-ProteinID:
XP_065262236
LinkDB
All DBs
Position
6:126057471..126260209
Genome browser
AA seq
433 aa
AA seq
DB search
MRPWEMTSNRQPPSARPNQHHFSGERCNTPARNRRSPPVRRQRARRDRLSRHNSISQDEN
YHHLSYGQQQAIEEPRAFHPPNVSPRMLHPAAHPPQQNAVMVDIHEQIHQGTVPVSYTVT
TVAPHGIPLCTGQHIPACNTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAF
PPLISSDPFLLHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLPVGG
FTYPPSAHPPTLTPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPP
YHPSLLPYVLSMLPVPPAVGPAFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADI
EQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKATKANRLK
VLPPFPIALFSSS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccatgggagatgacatcaaataggcagcctccttcagctcgacccaaccaacat
cacttctcaggggaacgatgcaacacacctgcacgcaacaggaggagtcctcctgttaga
cgccagagagcgagaagggatcgcctgtctcgacacaattccattagtcaagacgaaaac
tatcaccatctctcctacggacagcaacaagcaatagaagagccccgagccttccaccca
ccgaatgtatccccccgtatgttgcacccagccgctcatccgccacagcagaatgcagtg
atggtcgacattcatgaacagatccaccagggcacagtccctgtctcatacacagtaaca
acggtggcaccacatgggattccgctctgcacaggccagcacataccagcttgtaacaca
cagcaggtcccaggatgttctgtggttttcagtggacagcaccttcccgtctgcagtgtg
cctcctccaatgcttcaggcatgctcagtccaacacttaccagtaccgtacgcagcattc
ccaccccttatttctagtgatccatttcttttgcatcctcctcacctctctccacaccat
cctcctcacctgccaccgccaggccagtttgttcccttccaaacacaacagtcacggtcg
ccacttcaaaggatagagaacgaagtagaacttcttggagaacaccttccggtaggaggt
tttacctaccctccctcagcccatccaccaacattgactccctcagccccactccagttc
ttaacgcacgaccctttacaccaggaggtgtcctttggagtaccttatccaccctttatg
cctcgaagactcacagggcgcagtagataccgatcccagcagccaataccaccaccccct
tatcatcccagcctgttaccatatgtgctatcaatgcttccagtgccacctgcagttgga
ccagctttcagcttcgagttggatgtggaagatggagaggtggaaaactatgaggcgctg
ttgaatttggcagaacgattgggagaagccaaaccacgaggactgacaaaggcagacatt
gaacagcttccatcttacaggttcaatccaaacaaccaccagtcagaacagactttgtgc
gtagtatgcatgtgtgattttgagtcaaggcagctacttagagtcttaccttgtaaccac
gagttccatgccaagtgtgtcgataaatggcttaaggctacaaaagccaacagactgaaa
gtgctgcctccttttccaatagcattattttctagtagttga
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