Emys orbicularis (European pond turtle): 135880146
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Entry
135880146 CDS
T11511
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135880146 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eob03019
]
135880146 (SKIC3)
Messenger RNA biogenesis [BR:
eob03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
135880146 (SKIC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_16
TPR_12
TPR_14
TPR_8
TPR_CcmH_CycH
TPR_11
TPR_17
CFAP70_TPR_C
ANAPC3
TPR_9
CFAP70_mid_TPR
CABIN1_N
Fis1_TPR_C
TTC22_N
ARM_TT21_C
TPR_15
Retrotran_gag_2
TPR_30
DUF7923
TPR_20
TPR_10
Motif
Other DBs
NCBI-GeneID:
135880146
NCBI-ProteinID:
XP_065262371
LinkDB
All DBs
Position
6:complement(60685404..60766158)
Genome browser
AA seq
1575 aa
AA seq
DB search
MPQELEDAVIMSNKEVKAALKSARDAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAA
AELEQPDQAQSAYKKAAELEPGQLLAWQGLANLYEKSNQTDVKENLFNVYQKLLELYEST
DKQKWCDVCRKLVELYHQEKKYLEVAHTWHKLIKIKQEEGADNAELHQLWKRLIQLLPDS
TQNQDNETQQLLLTAFEHAVNSADTVPSEDHEKLYKNFIQCLSKFPHETARLKKACDDMM
VLYPTMSYPLEVLCLHFIQSGSFTEEALRCCCRLMEMDSSSSLGLIGLGIKFLQEKKYEE
AVKSLTEGLQQTSQCQAAWYYLAEAQMKMHKHKEAVISCNRALKISGQFDDDSGNLQQKY
IALHLKAEALIKIAGADAAEEAISTLEQVSDINNDPVLLALKGQAYLNKGLIDQASKVAQ
QLVLSHPHLAEAHALEGLIHYTQKNYQQAERSFQRAIERKAEIAEYHHYLGLTYWFMGEE
IRKDKTKALTQFLKAAKLDSYMGSVFCYLGHYYRDVAGDKSRARGCYKKAFELDRTDGEA
GAAAVDLSVELGDTETALAILTAVTERASAGTAKWAWLRRGLYYLRASQHSQAVADLQAA
LRADPKDSNCWESLGEAYLSRGGYTTALKSFTKASELNPESIYSIYKAASIEQILGKYKD
AIAEYQQILKKSKEYVPALKGLGECYLMMARAALADYLDGKVLDYVEQALEYFTRATKHR
PDVSCLWKLLGDACTIVHVISSSKVNVKVLGSLLGQNEGKQMLKKSELLSLGGRCYGRAL
KLMSSPNTWCDLGINYYRQAQHLTAADSDTNEISELLEKSLQCLKKAVRLDSKNHLYWNA
LGVVACCSGVGNYALAQHSFIKSVQAEQINVVAWTNLGVLYLATENIQQAHEAFKVAQSL
EPSYLMCWIGQALIAEAVGSYETMDLFRHTTELSMHTEGAKGYAHWVCSTLQDKTNRETE
LYRYNIVQMNAIPAAHVVLSKYTERIQNDASAFTMLGYLNEYLQLKKQATDAYQRAVSLL
KNSEDKEKYNISMQNYGRSLCAIGQYDKAIQAYMSTPLTALDGIVGVALAYFKKGLLQDS
IKAYERALSLAKSEQDKAHILTALAIMEYKQNKVDAAKTLLFKCSILKEPTIESLQALCT
LGLAKQDATLATAALKELLKHTKSKDNVYERCLITSAVYALQGRNVGAQRQASKAVHSNP
DDPALWALLSQLVPLYTPQNAKGGAVAGNVAHILDLNHGKKALLHTAVNQLAVGCHSAED
EKNNALKDIQKAVHLFPDDPATWAVLMGACHAENTVVYLSNTQPKRRDLEMTLVATVSAK
TKEKDLSAEYIQALEDWSLCQAITGLKETGRITEAEALCTKGLKSCPNHPDLFLLLRQVQ
CKQLFQSHRELPDAILEELHKTVMSNSTSVTAWHWLAKVYQSQRMMVAAEMCYRKSLQLA
SQQGSWNGKLSSLLRLAMLALEICMANISNDHWPSLVQEATTEALKLSFCPLAVLLQALL
QYNRKMGARETRRMLERVVYQPGYPETIVSVARWYLLRHLYAKDDYELIDALVANAKANG
DTRSLELDKKLSASA
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgccacaggagctggaggacgcagtaataatgtcaaataaggaggtgaaggcagcattg
aaaagtgccagagatgcaataagaaataaagaatacaaagaagccttaaaacattgcaag
gcagtgctgaaacaagagaaaaataactacaatgcctgggtgtttattggcctggcagct
gcagagttagagcagcctgatcaggcccaaagtgcatacaaaaaggctgctgaacttgaa
ccaggccagctactggcatggcagggattagcaaatttgtatgagaaatctaaccaaaca
gatgtcaaagaaaacttgttcaatgtttaccaaaagctcttggaactctatgaaagtact
gacaagcagaagtggtgtgacgtatgtaggaaacttgtggaactgtatcaccaagaaaaa
aaatacctagaggtggctcacacatggcataaactgataaagataaaacaggaggaaggt
gcagataatgctgagctccaccagctatggaagaggctgatccaattactgccagacagt
acacagaatcaagataatgagacacagcagttgcttttgactgcatttgaacatgcagtg
aactctgcagacacagttcccagtgaagaccatgaaaagctttataaaaacttcattcag
tgtttgtcaaaatttcctcatgagactgctaggctgaagaaggcctgtgatgatatgatg
gttttgtatcctaccatgagttatcctttagaagtgctctgcttgcactttattcagtca
ggcagtttcactgaagaggccctgcgttgttgttgcaggcttatggagatggactcaagt
agcagcctgggccttattggtttaggtatcaaattcctccaagaaaaaaaatatgaagaa
gctgtcaagagcctaactgaaggtttgcagcagaccagccaatgtcaagcagcatggtat
tatctggcagaggcgcaaatgaaaatgcataaacataaagaagctgttatttcctgcaat
cgagctcttaagatatcaggacaatttgatgatgatagtggcaatctacagcagaaatac
attgcccttcatttgaaagcagaggctcttattaaaatagcaggtgctgacgctgcagaa
gaagccattagcactcttgagcaggtttcagatataaataatgacccagtgcttctagct
ctcaaaggtcaggcttatctgaacaaaggtttgattgatcaagcttcaaaggttgcacaa
cagctcgtgttgtcccaccctcacctggcagaagcccatgctcttgagggtttgattcat
tatacccaaaagaattatcaacaggcagagagaagctttcaaagagcgattgaaagaaaa
gctgaaattgcagagtaccatcactacctaggactcacttactggttcatgggtgaagaa
ataaggaaagataaaacaaaagctctcactcagtttctgaaggctgcaaaattggacagc
tacatgggaagcgtcttctgctatttaggtcattactacagagatgtagctggagacaaa
agcagagctcgtggctgctataaaaaggcttttgaactagatagaactgatggagaagct
ggagcagcagctgtagacttaagtgtggaacttggagacacggagactgctctggcaatc
ttgactgcagtaactgaaagagcaagtgccggtacagcaaagtgggcctggcttcgtcgt
ggactttactacctgagagccagtcagcactcccaagcagtggctgacttgcaggcagct
ctaagggcagatccaaaggactccaactgttgggagtctctaggagaggcatacctgagc
agaggtggatatacaacagcactgaagtcctttacaaaggccagtgagctgaatcctgaa
tcgatatacagtatttacaaggctgcatcaattgagcagattctaggaaaatataaagac
gctatagctgaataccaacaaatcttaaagaagtcaaaagaatatgtacctgctctcaaa
ggtctgggtgagtgctatctcatgatggcacgggctgctcttgcagactatcttgatggg
aaagttctagattatgtagaacaagcacttgaatattttacacgagcaacaaagcatcgt
cctgacgtttcttgcctttggaaactacttggggatgcatgtactatcgtgcatgtcatt
tcatcatccaaagtgaatgttaaagttctgggatcccttcttggtcagaatgaaggcaaa
caaatgctgaagaaaagtgagctcctcagtttgggaggaaggtgttatggcagagcatta
aaactgatgtcctcacctaacacatggtgtgatcttggaataaactactatcgtcaagca
cagcacctaacagcagccgatagtgacacgaatgaaatcagtgaactgttagagaaatct
ttacagtgtctcaaaaaagccgtgaggcttgatagtaaaaaccatctctattggaatgca
cttggtgtggttgcctgttgcagtggtgttgggaattatgctcttgctcaacattcattc
atcaagtctgttcaagctgaacaaataaatgttgttgcctggaccaacttgggggttttg
tacttagcaactgaaaacattcagcaagctcatgaagccttcaaggtagctcagtccctt
gagccatcttacttaatgtgctggattggacaggctcttattgcagaggcagtgggcagc
tatgaaactatggatctctttaggcacaccactgaactcagtatgcataccgagggagca
aaaggctatgctcattgggtatgctcaacgctgcaagataaaaccaacagagaaacagag
ctgtatcggtacaacattgttcaaatgaatgctattccagcagcgcatgtggttttaagc
aaatacacagaaagaattcaaaatgatgcatctgctttcacgatgctgggttatttgaat
gaatatctgcaactgaaaaagcaggcaacagatgcttatcaaagggcggtctcattgctg
aagaactctgaagataaagaaaagtataacatatcaatgcaaaattatggtagatcactc
tgtgccataggtcaatatgacaaggccatccaggcttacatgtccactcctctcacagcg
ttagatggcatcgtaggagttgcactagcttacttcaagaaagggcttttacaagacagc
attaaagcttatgagagagccctatctcttgccaaatctgaacaagacaaagcccatatc
ttgacagcccttgcaataatggagtacaaacagaataaagtggatgctgcaaagacgttg
ctgtttaaatgctctatattaaaggaacctactatagaaagcctgcaggctctgtgcact
ctaggtctggcaaagcaggatgctacacttgcaacagcagcacttaaagaattactgaag
cacacaaaaagcaaggataacgtttatgagagatgccttattacatctgctgtgtatgcg
ctgcaaggtagaaatgtgggagcgcagaggcaagcttccaaagctgtccatagtaaccca
gatgatcctgccctttgggctcttctgtctcaacttgttcctctgtatacgccacaaaat
gcaaagggtggagctgtggcaggaaatgttgctcatatacttgatttaaaccatggaaag
aaagccctgctgcatactgcagttaatcagttggcagtgggatgtcattcagctgaagat
gagaaaaacaatgcactgaaagatatccaaaaggcagtccatctttttccagatgatcct
gctacatgggcagtgctaatgggtgcctgccatgctgaaaatactgttgtctatttgagc
aacacacagcctaagagaagagacctagaaatgacacttgtagccacagtttcagccaaa
actaaagaaaaggacctttcagctgagtacatccaggctcttgaagactggtctctttgt
caggctattactggtttaaaagagactggtagaattacagaagctgaggctctctgcaca
aagggtttaaaaagttgccccaatcacccagatctgtttctgctcttgagacaagttcag
tgtaaacagctttttcagtcacacagagagcttccagatgccattttggaggaacttcat
aaaactgtcatgtccaactccacttcagtaacagcatggcattggctcgcaaaagtgtac
cagtctcaaagaatgatggtcgcagcagagatgtgttacagaaagagtctacagttggca
tcccaacagggcagttggaacgggaagttatcaagtttgctcaggctagctatgcttgca
ctggaaatctgcatggctaacatttcaaatgatcattggccatccttggttcaggaggca
acaactgaagccttgaaactttccttctgcccactggctgttcttctgcaagcgctgtta
cagtacaatcgcaaaatgggggcgagggagactcgtcgaatgttggaaagagtggtgtat
cagcctggatatccagaaaccatagtatcagttgcacgctggtacctcctaagacattta
tatgccaaagatgattacgaattaatagatgcacttgtagcgaatgccaaagctaatgga
gatactagatctctggaactagacaagaaattatcagcatctgcctag
DBGET
integrated database retrieval system
