Emys orbicularis (European pond turtle): 135880171
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Entry
135880171 CDS
T11511
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03013
Nucleocytoplasmic transport
eob03015
mRNA surveillance pathway
eob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135880171 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
135880171 (NCBP1)
03015 mRNA surveillance pathway
135880171 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eob03019
]
135880171 (NCBP1)
03041 Spliceosome [BR:
eob03041
]
135880171 (NCBP1)
Messenger RNA biogenesis [BR:
eob03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
135880171 (NCBP1)
Spliceosome [BR:
eob03041
]
Common components
Common spliceosomal components
Cap binding complex
135880171 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Importin_rep_6
C24B10_03
Vfa1
DUF1690
Motif
Other DBs
NCBI-GeneID:
135880171
NCBI-ProteinID:
XP_065262399
LinkDB
All DBs
Position
6:complement(135553224..135597856)
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AA seq
795 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRRTSEPSEIEERLESLICRVGEKSTSSLESNLEGLAGVLEAD
LPNYKSKILRILCTVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKANM
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRCDWYVFAFLSSLPWV
GKELYEKKDAEMDRILSQTESYLKRRQKIHVPMLQVWSADKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVVFAELF
QLPVPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCIDRFMNWFSHH
LSNFQFRWSWEDWSDCLTHDLDKPKPKFVREVLEKCMRLSYHQRIIDIVPATFSVLSPAN
PSCIYKYGDEGNKSLPGYTVALCLTIAIKNKTSNDEIFGILKDVPNPNQDDDDDEGFTFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVVYEVWKNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSPELAHDFTRFYIWEILHSTIRKMNKHVVKIQKELE
ETKARLARQHKRRDSDDDDDDDDRSSDREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQ
RFIMILTEHLVRCETGGIDVITPWYKNCIERLQQIFLQHHQIIQQYMLTLENLLFTAELD
HHILAVFQQFCALQA
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgacgagaacgatggaggacaacctcataaaaggaggaga
acatctgagccatctgaaattgaagagagactggaatctttaatatgcagagtgggagag
aagagtacttcttctttggagagcaacttggaaggcctagctggtgtcttggaggctgat
ctgccgaactacaaaagcaagatattaagaattctttgtacagttgcacgtctgttacca
gaaaagcttaccgtttacacaacactagttgggttgctgaacgccaggaactacaatttt
ggtggggaatttgtagaagctatgattcgtcagctcaaagaatgtttgaaagccaatatg
tataatgaagctgtgtatttagttcgttttctatctgaccttgtgaattgtcatgtaata
gctgcaccttcaatggtagccatgtttgagaactttgtgagtgtgactcaagaggaagac
gtgcctcaggtgcgatgtgactggtatgtgtttgcatttctgtcatctctgccctgggtt
ggaaaagaactgtatgagaaaaaggacgctgagatggaccgcattttgtcccagactgaa
agctatttgaaacggcgtcagaagatccatgtacccatgttgcaagtttggtctgctgac
aaaccacatccacaagaagagtatttagactgcctttgggctcagattcagaagttgaaa
aaagatcgctggcaggaaagacacattctgaggccctatcttgcctttgacagcatcctc
tgtgaagcactgcagcacaatctgcctccttttactccaccacctcacactgaagattca
gtttaccctatgccgagagtcatctttagaatgtttgactacacagatgatcctgagggt
cctgttatgcctggcagtcattcagttgagagatttgtaatagaagagaatcttcactgc
atcatcaaatcccactggaaagagagaaaaacgtgtgctgcacagctactgagctatcca
ggaaataacaagatccctttgaactatcacatagttgaggtagtatttgcagaactgttt
cagcttccagttccaccacacattgaggtcatgtacacaacacttctgattgaattgtgc
aaacttcaacctggctctttaccacaagttcttgcacaagccacagaaatgctgtacatg
cgtttggatacaatgaacactacgtgtatagaccggttcatgaactggttttcccaccat
ctgagtaactttcagttccgttggagctgggaagattggtcagattgtcttactcacgac
cttgacaagcccaaacccaagtttgtaagagaagtcttggaaaaatgcatgaggctttca
taccatcagcgaataatagatattgttcctgctacattctctgtccttagtcctgcaaac
ccatcgtgtatttataaatatggagatgaaggcaataagtctcttccgggatacactgtt
gcactctgtttgaccattgccattaaaaataagacaagtaatgatgaaatcttcggcatc
ttaaaagatgtgcccaatcctaaccaggatgatgatgacgatgaaggattcacctttaac
cccttgaaaatagaagtttttgtacagactctgctccatttagctgccaagtcgttcagc
cactcattcagtgctctggcaaagtttcatgaagtcttcaaaaccctcgctgaaagtgat
gaggggaagctccatgtgctgagggttgtgtatgaggtctggaagaaccatccacagatg
attgctgtgcttgtggataagatgattcggacgcagatagttgattgtgctgccgtagca
aactggatcttctctccagagcttgctcatgattttactaggttctatatctgggagatc
ttacactccacgattcgtaagatgaacaagcacgtagtgaagatacaaaaggagctagag
gagactaaagcaagattagccaggcagcacaaacgacgagacagtgatgatgacgacgat
gacgatgaccgaagcagcgatagggaagatggacccttggaagagcagatagaacgcttg
caggagaaagtagagtctgctcagagtgaacaaaagaatctcttccttgttatattccag
cgtttcattatgatattaacagagcatttagtgcggtgtgaaactggtgggattgatgta
attacgccttggtacaagaactgtatagagagactgcagcagatcttcttacagcatcat
cagataatccagcagtacatgctgaccttggagaaccttctgtttacagctgaattggac
catcacatattggctgtatttcagcaattctgtgctctgcaggcctga
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