Emys orbicularis (European pond turtle): 135880539
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Entry
135880539 CDS
T11511
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135880539 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eob03021
]
135880539 (SMARCA2)
03036 Chromosome and associated proteins [BR:
eob03036
]
135880539 (SMARCA2)
Transcription machinery [BR:
eob03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135880539 (SMARCA2)
Chromosome and associated proteins [BR:
eob03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
135880539 (SMARCA2)
Chromatin remodeling factors
BAF complex
135880539 (SMARCA2)
PBAF complex
135880539 (SMARCA2)
GBAF(ncBAF) complex
135880539 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
135880539
NCBI-ProteinID:
XP_065262937
LinkDB
All DBs
Position
6:complement(93889789..94071384)
Genome browser
AA seq
1570 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHSLPSM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDMHCSSMKSANMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPHMPPSQPGPMIPGDPQVMSQPNRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQAPANYSRLPGIGVHSIPGPPT
GPGPASGVPGHAAAMTPKSWAEGQGPDMNVASTPQKLAVPPPSGRPSPAPPAAQPSAAMP
GPSVPQPTPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELEN
LPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTL
REARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATW
HANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNL
VWEHKQAQAAKEKKKRRRRKKKAEENAEGMGSDLGPDGEPIDESSQMSDLPVKVTHTETG
KVLLGPEAPKASQLDAWLEMNPGYEVAPRSDSEEESDSEYEEEDDDEESSRQEVDEKILL
DPNSEDVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAIAERVEKQSALLING
SLKHYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPL
STLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAK
IRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTI
FKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKV
EYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMF
QHIEESFAEHLGYSSGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIM
EDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVI
IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAG
MFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRR
EDARNPKRKPRLMEEDDLPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTE
KQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPK
LTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHK
YRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEDESEDESNDDE
EDDEEDESESESKSVKVKIKLNKKDEKSRDKGKGKKRQSRVKAKPVVSDDDSDEDQDEND
QSEASGSDDE
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgccaacagatcctggcgcaatgcctcatcccggcccttccccggggccaggc
ccatcacctggaccaattctaggacctagcccaggaccaggaccctctccgggttcagta
cacagcatgatgggaccgagtcctggaccccctagtgttccacattcactgcccagtatg
gggcccactgattatccacaggaaggcatgcaccaaatgcacaagtccattgatggcttg
catgaaaaaggaatggttgaagacatgcattgtagctccatgaagagtgcaaatatgaga
ccgcctcaccctggaatgggcccaccacagagtccaatggatcagcatagccaaggttat
atgtctcctcacccatctcctttgggagcaccagaacatgtgtccagcccaatgtctgga
gggggcccaactccaccccacatgccaccaagtcaaccaggacccatgataccaggagat
ccacaggtcatgagccaacccaacaggggtccttcaccttttagccctgtccagctgcac
cagctccgggctcagattctagcttacaaaatgttagctagaggccagcctttacctgaa
aacctgcaacttgctgttcaagggaagaggacgttgcctgggattcaacagcaacaggct
cctgctaactacagcagactacctggtattggggtgcattcaattcctggtcccccaact
gggccaggacctgcttcaggagtgccaggacatgcagctgccatgacccctaaatcttgg
gcagaaggtcaaggcccagatatgaatgttgccagtacaccacaaaagcttgctgtacca
cctcctagtggaaggccttcacctgcccctcctgctgctcagccttctgcagccatgcct
ggtccttctgtaccacagccaacacctggacagccttcacctattgtccagctgcaacaa
aaacagaaccgtatcagccccatccagaagccacaaggattggatcctgttgaaatactc
caggagcgtgaatacagacttcaggctcgaattgctcacagaatccaggaactggagaat
ttacctggctctctgcctcctgatctgcgaaccaaagctacagtcgagctgaaggcactt
aggttactgaattttcagcgccagctaagacaagaggtggtggcctgcatgcgccgtgac
acaacactggagacagcactgaattccaaagcctacaagcgcagcaagcgccagactctg
agggaagcccgcatgacagaaaagcttgagaaacagcagaaaatagaacaggagagaaaa
cgtagacagaagcaccaggaatatctgaacagcatattgcagcatgctaaagattttaaa
gaataccaccggtcagtggctgggaaaattcagaaactttctaaagctgtggcaacttgg
catgccaatactgagcgtgagcagaagaaggaaactgagcgaattgagaaagaaagaatg
agaagactgatggctgaagatgaagaaggctaccgtaagctgattgaccagaagaaagac
agacgtctggcatacctgctgcagcagacagatgagtatgtggccaacctgactaatctg
gtttgggagcacaagcaagcacaagctgccaaagaaaagaaaaagaggaggagaagaaag
aagaaggcagaagagaatgcagagggaatgggatctgatcttggtcctgatggagagccc
attgatgagagcagtcagatgagtgaccttccagtcaaagtgactcacactgaaacaggc
aaagttcttcttggaccagaagctccaaaagcaagtcagctggatgcttggttagaaatg
aatcctggctatgaagtagctcctaggtctgacagtgaggaggagagtgactctgaatat
gaggaggaggatgatgatgaggaatccagtagacaagaagtagatgagaaaatactcctg
gatcctaacagtgaagacgtttctgagaaggatgctaagcagatcattgagacagccaaa
caagatgtggatgatgaatacagtatgcaatatagtgctagaggatctcagtcctactat
acagtcgctcatgcaatcgctgagagggtggagaaacagtctgctcttcttattaatgga
tcactaaaacattatcagatccagggcctggaatggatggtttcactttataataacaat
ttgaatggaattttagctgatgaaatggggctaggaaagaccatacagactattgcactc
atcacgtatctgatggagcacaaaagactcaatggcccctatctcatcattgttcccctt
tcgactttatccaactggacatatgaatttgacaaatgggctccttctgtggtgaaaatt
tcttacaaggggacacctgccatgcgtcgttcacttgttcctcagcttcgaagtggaaaa
tttaatgttcttttaactacttacgaatacataataaaggataaacacattcttgctaag
attcgatggaagtatatgatagtagatgaaggccatcgaatgaagaaccatcactgcaag
ctgactcaggtcttgaacacccactacgtggctcctagacggattctgttgactgggaca
ccactgcagaacaagttgcctgaactttgggctctcctcaacttcctcctccccaccatt
ttcaagagctgcagcacctttgaacagtggtttaatgctccatttgccatgactggagaa
agggtggacttaaacgaggaagagactattctgatcatcagacgtctccacaaagtgtta
cgacccttcttgctgaggagactgaagaaagaggttgaatctcaactgccagaaaaggtt
gaatatgtgatcaaatgcgacatgtcagctcttcagaagattctctaccgccatatgcaa
gcgaagggaatcctcctcacagatggctctgagaaagacaagaagggaaaaggtggggcg
aaaactcttatgaacactatcatgcaattgagaaagatatgcaatcacccatatatgttt
cagcatattgaggagtcctttgctgaacacttgggctattcaagtggtgttatcaatgga
gccgagctttatcgggcctcagggaagtttgaactacttgatcgtattctaccaaagttg
cgagccactaatcaccgtgtgcttctcttctgtcaaatgacatccctcatgaccattatg
gaggactattttgcttttcgaaatttcctttaccttcgccttgacggtacaacaaaatca
gaggatcgggctgctctgctgaagaagttcaatgagcctgggtcacagtactttatcttc
ttgttgagcacaagagcgggaggcctgggcctgaatcttcaagctgctgacactgtcatt
atctttgacagtgattggaatcctcaccaggatttgcaggcacaagacagagctcaccga
attggtcagcagaatgaggttcgagttctgaggctgtgcactgtaaacagtgtggaggag
aagatacttgctgctgccaagtataaactgaatgtggatcagaaagtcattcaggccggc
atgttcgatcaaaaatcttcaagccatgaacggagggcttttctacaggctatattggaa
catgaggaagaaaatgaggaagaagatgaagttcctgatgacgagactctgaatcagatg
attgcgcgacgtgaagaggaatttgatctcttcatgcgtatggacatggatcgtcgcaga
gaggatgcccgaaaccccaagcgcaagccacgcttgatggaggaggatgatctgccatcc
tggattattaaagatgatgctgaagtggaaaggctcacctgtgaggaagaggaagaaaaa
atatttgggagggggtcccgtcagcgcagagatgtggactacagcgatgctctcacagag
aaacagtggctcagggcaatcgaagacggcaatttggaagaaatggaagaggaagtccgg
cttaaaaaacgaaagagacgaagaaatgtggataaggattctgggaaagaagatggagaa
aaggcaaagaagagaagaggcagacctcctgcagaaaaattgtcacccaacccccctaaa
ctaacaaaacagatgaacgccattatcgatactgtgataaactacaaggacagttcagga
cggcagctaagtgaagtcttcattcagctcccatctaggaaagaattaccagaatattat
gagttaattaggaaaccagtggacttcaaaaaaataaaggaaagaattcgtaaccataag
taccgtagccttggtgacttggagaaagatgtcatgttgctgtgtcacaatgctcagaca
ttcaacttggagggatcgcagatttatgaggattctattgttctccagtcagtcttcaag
agtgcccgacagaagattgccaaagaggatgagagcgaggatgaaagcaatgacgatgag
gaagatgatgaggaagatgagtcagagtcagaatcaaaatctgtgaaagtgaaaatcaag
ctgaataagaaggatgagaaaagccgggacaaagggaaaggcaagaagcgacagagccgg
gtaaaagccaagcctgtcgtgagcgatgatgacagtgatgaggatcaggatgaaaatgac
cagtcagaagcaagtggaagtgacgatgagtga
DBGET
integrated database retrieval system
