Emys orbicularis (European pond turtle): 135880809
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Entry
135880809 CDS
T11511
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
eob Emys orbicularis (European pond turtle)
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eob03036
]
135880809 (JMJD1C)
Chromosome and associated proteins [BR:
eob03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
135880809 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
135880809
NCBI-ProteinID:
XP_065263224
LinkDB
All DBs
Position
7:49024466..49268473
Genome browser
AA seq
2359 aa
AA seq
DB search
MQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQMTF
LDDVVHSLLKGENIGITSRRRSRSNQNSNTAHGHYTRAQANSPRPAMNSQTAAPKQNSHQ
HHQQRNARPNKRKGSDSSMPDEEKMKEEKYDYIGRGENPKSKNKHFINKRRKPEEDEKKL
SMKRLRTDNISDYSESSDSENSNKRLTDSSSEQNSENESKRKNTSNINGEEGKSQSSERV
EEQTLIDRQSPWDEIQADKNHQDAERPKSAELDLQEKNSLHPAEQLKFHGQSASDANVQE
CNVENQHTMELLTNEQFVPRPPTPKCGVDATNENNSDEESQENAASTFGLQTLQKIVSCG
SNLKHQFTNVNFLEVRKQETDQSWVSNVVGKMDLIQSGIMKTTVNEHLNPEKEKVQHGSF
VSSLNVASLAEEGKLHKRSPAPDAMKSKSSTSVDHPKTKSNSSPDVKPKLTQSPDTVKSK
VSYQNSHVTGVSRSANKTEHDMPRSSFHPVPARVSALEATKSPLIIDKNEHFTVYRDPTL
IGQETGTNHISPYLHQHNYPLHSSSHRTCLNLNTHHPALSGAPHLLTGSSNQTPLSAINT
HPLSTASHHSVHHPHLLPAVLPGVPTASLLGGHPRLETAHASSLSHLALAHQQQQMLQHQ
SPHLLGQAHPSASYNQIGLYPIIWQYPNGTHAYSGLGLPSSKWVHPETPVNAEASLRRNT
PSPWLHQPTPVTSADSLGLLSHIPVRPSSADPHRPLKLTTHSSPPLSKNIVDHHKEELER
KAFIEPLRSVTTVPVKTDLEHSRTQTKESHLHRHFVDPMLSQLQKPPQETGERLSKYKEE
HRRILQESIEVAPFTAKIKAPEGERENYSRVTPLSSSSPKSYAVKHDKEPERSVSELYKI
KHSAPQSLPQSNYFTTLSNSVVNEPPRSYPSKEVSSLYVDKQNSCPSTAANPQSLISFIS
SLSKPPPLIKHQPEGEGSVSKITEQLSHQMTSHSVNSFRNDCRSPTQLSVSSSNTLRSMP
ALHRAPVFHPPVHQNLERKESSYSSLSPPTLTPVQPVNAGGKTQELQKPPTLVPEPKEAQ
TMYKSTSEQNLSDIWKSNNAPNNEKVEWHVERTSGKSQSATASVIVRPPSSTKYDSMPVM
QSASKDRVNERSSTGTNQTDCLKSAEARDTGRIILPNMNSDTTHTHYEKNFPAVSQGSIP
SSVTPTTTIMCSTKTDVTTSAATTTSVSSWGSSEVTYSLSNTVLACTPLECTSSRTVSQV
VAQTQENKVNTTAPVTPASGKTGSAIQPNSGFSGPTDFIHLKKHKAALAAAQFKSSNASE
TESNAVKNQTFPASISLDSTIVCNTINKANCVGNGQASQTSQPNYHTKLKKAWLTRHSEE
DKNTNKKENSGNNVSEIIKPCTVNLIASTSSDLQNNIESTIRADKFVKEDKHTRRKTKRT
YESGSECGDSDESESKSEQRTKRQPKPTYKKKQNDLQKKKGDTEEEVKPNGVLSRSAKER
SKMKLQSSSNTGIPRSVLKDWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRLIRSKK
GEEPTHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEAMSLWTHDNYEDDEVDLET
SKYILDIIGDKFCQLVTSEKTAMSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQ
KCGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMH
SLREKFEIKSYCQCTSNQSMQTGKFPAMNGVSQVLQNVLNHSNKISLCMPESQQPNTPQK
SETNGNTSPGSDVSADSKLTPPESQSPLHWLADLAEQKAREEKKENKECPPGKHTKEERD
QDSSESLNCKTSPPVPQNNEQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVYSTGTTGGKG
GRTMPNILDDIIASVVENKIPPNRPPKINVKSELKDGPKDGQKSILDDCSKFYSDIPHSW
ICDKHILWLKDHKNSSNWKLFKECWKQEKPVLVSGVHKKMNINLWKAESISLDFGDHKAD
LLNCKDSIISNTNVKEFWDGFEEVAKRQKIKGGETVVLKLKDWPSGEDFKAMMPARYEDL
LKSLPLPEYCNPEGKLNLASHLPGFFVRPDLGPRLCSAYGVAAAKDQDIGTTNLHIEVSD
VVNILAYVGIAKGNGVLSKAGVLKKFEEEDLDDLLRKRLKDSSELPGALWHIYAGKDADK
IREFLQKIAKEQGLEVLPEHDPIRDQSWYVNKRLRQRLFEEYGVKTCTIIQFLGDAIILP
AGALHQVQNFHSCIQVTEDFVSPEHLVQSFHLTQELRLSKEEINYDDKMQVKNILYHAVK
EMVRALKINENEMEDVEEN
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtccatattccttaaacggatatagggtgagagtatacagacaggattctgcc
acccagtggttcactggtataattactcatcatgatctcttcacccgcactatgattgtt
atgaatgaccaggtgttagaaccacagaatgttgatccttctatggttcagatgaccttt
ctagatgatgttgttcactctttgttgaaaggtgaaaatattggcatcacatcacgtcgc
aggtctcgttccaaccagaacagcaacacagcccacgggcattatacacgtgctcaagca
aatagtcccagaccagccatgaactcccaaactgcagcaccaaaacagaactctcaccag
caccatcaacaacggaatgctcgtccaaataaaaggaaaggctcagatagcagcatgcct
gatgaggaaaagatgaaggaagaaaaatatgattatataggtcgaggagaaaatcccaaa
agtaaaaataaacactttattaataaaagaagaaaacccgaagaggatgaaaagaaacta
agtatgaaaagattgcggacagacaatatctctgactactctgagagcagtgactcagaa
aattcaaataaaagattaacagattcttcatcagagcaaaattcagagaatgagtcgaaa
agaaagaacacttcaaacataaatggagaagaaggaaaatcccagagtagtgagagggta
gaggaacagacactaatagataggcagtctccatgggatgaaatacaagcagataaaaat
catcaagatgcagaaagaccgaagtcagctgaattagacctacaagaaaaaaattcactc
catccagcagagcagctgaaatttcatggtcagagtgccagtgatgcaaatgttcaagag
tgcaatgtagaaaatcagcatactatggaattgttaacaaatgagcagtttgtacccagg
cctcctacaccaaaatgtggtgttgatgcaactaatgaaaacaattctgatgaggagagc
caggaaaatgctgcaagtacctttggtttgcaaacacttcagaaaatagtgtcttgtggc
agcaatttaaaacatcaatttacaaatgtaaattttctagaagtaagaaaacaagaaact
gatcagagttgggttagcaatgttgtcggtaaaatggatttgatacagtctgggattatg
aaaacgacagtaaatgaacatttaaatcctgaaaaagaaaaagttcagcatggctcattt
gtgtcttcattaaatgtagcttcattagctgaagagggtaaactacataaacgaagtcca
gcccctgatgctatgaagtcaaaatctagtacttcagttgatcatcctaaaacaaagtca
aattcttcacctgatgttaagcctaaactcacccaatctcctgatactgtgaagtcaaag
gttagttatcagaacagccatgttactggagtatcaaggtcagcaaataaaactgagcat
gatatgcctaggtctagttttcatccagttccagctagagttagtgctttagaagctact
aaaagtcctcttattattgacaagaatgaacatttcacagtatacagggatcccactctt
attggtcaagaaacaggaactaatcacatttcaccttacttacatcagcataattatcct
cttcattcctcatcccacagaacctgtttaaatctgaacacccaccatcctgcattaagt
ggtgcaccccatctattaactgggtcttcaaatcagactccattatctgctattaacact
catcctcttagtactgcatctcaccattctgttcatcaccctcatctacttcctgcagtg
ttacctggagtgcctacagcttccttattaggtggccatccacgactagagactgctcat
gccagcagcttaagccatttggcattagcacaccagcagcagcagatgttacagcaccaa
tctccacatcttcttggacaagctcatccttctgcttcatataatcagataggactttat
ccaattatttggcagtatccaaatggaacacatgcttactcaggacttggtctaccctcc
tctaaatgggtccatccagaaactcctgttaatgctgaggcttctttaagaaggaatact
cccagcccttggttacaccaacccacccctgtgacctcagctgacagtcttgggttactg
agtcacattcctgtaagaccatccagtgcagatccgcatcggccactcaaattgacaaca
cattctagtccaccattgtccaaaaatatagtagatcatcacaaagaagaattggagagg
aaagcatttattgaacctttacgttctgttacaactgtaccagtgaagactgacctggaa
catagcagaacacagacaaaagagagtcatttgcacagacattttgtggacccaatgttg
agtcaattgcagaagccacctcaagagacaggagagcgactaagcaaatataaagaagaa
catagacggatacttcaagagagtattgaagttgctccttttactgctaagatcaaggca
cctgagggtgagagagagaattattctagagtaacgccattatcgtcttctagccccaaa
agctatgcagtaaaacatgacaaagaaccagagcgttctgtgtcagaactttataaaatc
aagcattcagcaccacagagtttgccgcaaagtaactatttcaccaccttgtcaaacagt
gtagtgaatgaaccaccaaggtcctacccatctaaggaagtttcaagtttgtatgtcgat
aaacagaatagttgtccttcaacagcagctaatccccagtctctcatttcttttatttca
tctctttcaaaacctccacctttgattaagcatcaaccagagggtgaaggttcagtaagc
aagataacagagcaactttcccatcaaatgacatctcactctgtaaattcttttagaaat
gactgcagaagccctactcagttgtcagtttcatcttcaaatacactccgaagtatgcct
gccttacacagagcaccagtgtttcaccctccagttcatcaaaacctggagagaaaggaa
agcagctatagcagcctttcacctccaaccctaacgccagtgcagccagttaatgctggt
ggcaaaacccaagaattacaaaaaccaccaactttagtacctgaacctaaggaagcgcaa
acaatgtacaagagcacttctgagcagaatttatcagatatttggaaatctaataatgcc
ccaaacaatgaaaaagttgaatggcatgttgagcgaaccagtggaaaatcgcaatccgcc
acagcatccgtcattgtacgtccaccttctagtacaaaatatgatagtatgccagtaatg
cagtcagcttccaaagatcgagttaatgaaagatcttcaactgggacaaatcaaacagat
tgcctaaaatcagcggaagccagagacactggaagaataattctgccaaatatgaactca
gacactacacacacacattatgaaaagaactttccggctgtctcacaaggcagtattccc
agttctgtcacacctaccacaactataatgtgcagtaccaaaacagatgtaaccacatct
gcagccacaactaccagtgtttcaagctggggtagttcagaagtgacatattctttatca
aacacagttttggcttgcacaccactggaatgtacctcctctagaacagtaagtcaggta
gtggcacagacacaagaaaacaaggtcaataccacagctccagttacaccagccagtggc
aagacaggaagtgccattcagcccaactctggattttctggcccaactgattttatccat
ttgaaaaagcacaaggcagcattggctgcagctcagtttaaaagtagtaatgccagtgaa
actgagtccaatgctgtgaaaaatcagacatttccagcctccatttccctagacagtact
atcgtctgcaatacaataaacaaagccaactgtgtaggcaatgggcaagcttcccagaca
agtcagccgaactaccacacaaaactgaaaaaggcttggcttactagacattcagaagaa
gataaaaacactaataaaaaagagaattcagggaacaatgtatcagaaattattaagcca
tgtactgtcaatttaatagcttctacatctagtgatttacaaaataacatagaaagtaca
atccgagcagataaatttgtgaaagaagataaacacacaagaagaaaaacaaaaaggact
tacgaatctggctctgaatgtggagactctgatgaaagtgagagcaagtcagagcaaagg
actaaacggcagcctaagccaacttacaaaaagaaacaaaatgatttgcaaaagaaaaag
ggtgatacagaggaagaagtaaaacccaatggtgttcttagcaggagtgccaaagaaaga
agcaagatgaagttacagagcagcagtaacactggcatacctcgttcagtattaaaagac
tggcgcaaagtaaagaaactgaagcaaacgggagaatcttttttgcaggatgactcttgc
tctgaaatagggcccaatttgcagaaatgcagagaatgtagactcattagaagtaagaaa
ggtgaagaaccaactcactccccagtattttgtagattttattactttcgtcggttgtct
tttagtaaaaatggagtggttaggatagatggtttctcttctcctgatcaatatgatgat
gaagcaatgagtttgtggacacatgacaattatgaagatgatgaagtggacctagaaact
tctaagtacattttagacatcataggtgataaattttgtcagctagtaacatctgagaaa
acagccatgtcctgggtgaagaaagatgccaaaattgcctggaagagagcagtgagagga
gtccgtgagatgtgtgatgcatgtgaagccacactgtttaacattcattgggtctgccaa
aaatgtgggtttgtggtctgcttagattgttataaggcaaaggaaaggaagagttctaga
gataaagaattatatgcttggatgaaatgtgtgaaaggacagcctcatgatcacaagcat
ttgatgccaactcagattattccaggctctgttctgacagatcttctagatgcaatgcac
agtcttagagagaaatttgagattaaatcctactgtcagtgtaccagcaaccagagcatg
caaactgggaagttccctgcaatgaatggtgtctctcaggttttacagaatgtccttaat
cacagtaataaaatttctctgtgcatgcctgagtctcagcagccgaatacccctcaaaag
tctgagacaaatggcaatacaagtccagggagtgatgtaagcgcagacagcaagttaact
ccaccagaatcccagtcaccactgcattggttagctgatctagcagagcaaaaagccaga
gaggaaaagaaagaaaataaagaatgtcctcctggaaaacatactaaagaagagagagac
caagacagttcagagtctctaaattgtaaaacatctcctcctgtgccccagaacaatgaa
cagggctcaaccttacgagacctactgactacaacagctggaaaactgcgtctgggctct
acagatgctggcattgcttttgctccagtttactctacaggaacaacaggtggcaaaggt
ggaaggactatgccaaacattcttgatgacataattgcttcagttgtagaaaacaagatt
ccaccaaatagaccaccaaagataaatgtaaaatctgaactgaaggatgggccaaaagat
ggtcaaaagtctattctggatgattgcagtaaattctacagcgatattccacattcatgg
atctgtgataagcacattttgtggctcaaagatcataaaaacagcagcaactggaagctc
tttaaagagtgctggaaacaagagaagcctgtattagtgtctggagtgcacaagaaaatg
aacatcaacttgtggaaggcagagtcaattagcctagattttggagaccacaaagctgat
ctcctgaactgcaaagacagcattatttcgaacaccaatgtcaaggaattctgggatggt
tttgaagaagttgcaaaacggcaaaaaataaaaggtggggaaacagttgtactaaaactg
aaagactggccctctggtgaagatttcaaggctatgatgcctgcaaggtatgaagactta
ttaaaaagtttaccattgccagaatattgtaacccagaaggaaaattgaacttggcttcc
catttaccagggttttttgtacgtccagatttgggacccagattatgcagtgcgtacggt
gtggctgctgctaaagatcaagatataggaactacaaatctccatattgaagtttctgat
gtagtgaacatccttgcctatgtgggcatagcaaaaggaaatggagtactgtcaaaagca
ggagtattaaagaagtttgaagaagaagatctggatgaccttttaaggaaaagattgaaa
gactcaagtgaattacctggggctttgtggcacatttatgctggcaaagatgctgacaag
ataagggaatttctgcaaaagattgcaaaagaacagggtctagaagttttaccagagcat
gatccaatacgtgaccagagttggtatgtgaacaaaagacttcgccaaagactttttgaa
gaatatggagtaaaaacctgcactattattcaattccttggtgatgctattattttacca
gcaggagcccttcatcaggtgcaaaattttcacagctgcattcaagtaactgaagacttt
gtgtctccagaacatcttgtacagtcatttcacttaacacaggaactgaggctgtcaaaa
gaagaaatcaattatgatgataaaatgcaggttaaaaatatcttgtatcatgcagttaag
gaaatggtgagagctttgaagattaatgaaaatgaaatggaagatgtggaagaaaactaa
DBGET
integrated database retrieval system
