Emys orbicularis (European pond turtle): 135881335
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Entry
135881335 CDS
T11511
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135881335 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eob03021
]
135881335 (TAF5)
03036 Chromosome and associated proteins [BR:
eob03036
]
135881335 (TAF5)
Transcription machinery [BR:
eob03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
135881335 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
135881335 (TAF5)
Chromosome and associated proteins [BR:
eob03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
135881335 (TAF5)
STAGA complex
135881335 (TAF5)
TFTC complex
135881335 (TAF5)
SAGA complex
135881335 (TAF5)
SLIK complex
135881335 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_EIPR1
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
Tricorn_2nd
PEP5_VPS11_N
CDK5RAP3
KNTC1_N
Beta-prop_ACSF4
eIF2A
RAB3GAP2_N
LisH_TPL
LisH_PAC1
VID27
Motif
Other DBs
NCBI-GeneID:
135881335
NCBI-ProteinID:
XP_065264032
LinkDB
All DBs
Position
7:4844757..4862711
Genome browser
AA seq
785 aa
AA seq
DB search
MAALPEEPAEVVVKPDPDGGVPPQPPPAPPPAAPPTTAPVEGEAAGAPGSGGEAAPPKPA
PPGPAASPAPTDRQTLLAVLQFLRRNNLHESEDILRREARLLGEEVAAAALSPAGPGAQG
TPGGETDATGGEALLSRVAAASGAAGGGVAAGASATPGGGAAVVAAPPGKVGGGVPVEDQ
PDVSAVLSAYKQQGDPALYEEYYSGLKHFIECALDCHRAELSQLFYPLFVHMYLELVYNQ
HENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQ
LLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFFG
LLKEPEIEVPLDDEDEEGENEEGKPKKKKPKRESMGSKSKKQDPNAPPQTRIPLPELKDS
DKLDKIMNMKEATKRVRLGAECLPSICFYTFLNAYQGLTAADVTDDSSMIVGGFADSTVR
VWSVTPKKLRSVKSAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDR
NYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATD
HYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL
AFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVYALRFSRDGEILASGSMDNTV
RLWDAVKVFEDLETDDFTTATGHINLPENSQDLLLGTYMSKSTPVIHLHFTRRNLLLASG
AYSPQ
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctacctgaggagccggctgaagtggtggtgaagccggacccggacgggggt
gtcccgccgcagccccctccggctcccccgcccgccgctccccccaccacggcgccggtg
gagggggaggcggcgggggccccggggagcggaggggaggccgctccccccaagccggcc
cccccgggtccggccgcctcccccgcccccacggaccggcagaccctcctggccgtgctc
cagttcctgcgtcgcaacaacctccacgagtccgaggacatcctgcgccgggaggcccgg
ctgctgggggaggaggtggccgcggctgccctcagccccgcgggacccggcgcccagggg
accccgggtggggagacagacgccaccgggggcgaggcgctgctcagccgggtcgccgcc
gcctctggagcggccggagggggcgtcgctgctggtgcctctgcaacccccggcggcggc
gccgctgtagtcgcggcaccgccagggaaagttggaggaggtgttcctgtagaagatcag
ccagatgtgagtgcagtgttatctgcctacaaacagcagggggacccagcgctgtacgag
gaatactacagtggactgaagcactttattgagtgtgccctagactgtcatcgggctgaa
ttatcccagttgttttatcctctctttgtgcatatgtatttggaattggtctacaaccag
catgagaatgaagcaaagtctttctttgaaaagtttcatggggatcaagagtgttattac
caggatgacctgcgtgtattatctagtttaaccaaaaaggagcacatgaaagggaacgag
accatgctggatttccgaacaagcaagtttgtgctgcgcatttctcgtgactcttaccaa
ctcttgaagagacatcttcaggaaaaacagaacaatcaaatctggaacattgttcaggag
catctgtacattgatatctttgatggaatgcctcgcagtaaacaacagatagatgctatg
gtgggaagcttggcaggggaggctaaaagggaggctaataaagcaaaggttttctttggc
ttattaaaagaaccagagattgaggtgcctttggatgatgaagatgaagagggggagaat
gaggaaggaaaaccaaaaaagaaaaaacctaaaagagagagcatgggatcaaaaagtaaa
aagcaagaccctaatgctcctccacaaaccagaattcctcttcctgaactgaaagactct
gacaagctggataaaataatgaatatgaaggaagccacaaaacgtgtgcgtcttggtgca
gaatgtttgccttccatctgtttctacacattccttaatgcctaccagggtcttactgca
gcggatgtcactgatgactctagcatgattgtaggaggctttgctgactccactgtaaga
gtatggtctgtgacaccaaaaaagctacgcagcgtgaaatcagcagcagatctcagtctc
atagacaaagaatcagatgatgtcttggagaggatcatggatgagaaaacagcaagcgag
ttgaagattttatatggtcacagcggacctgtctatggtaccagcttcagtcctgatagg
aactacctcttgtcctgttcagaggatggcactgtcagattgtggagccttcaaacattc
acttgcctcgtgggatataaaggacacaactatccagtgtgggatacacagttctctccc
tatggatattactttgtatcaggtggacatgacagagtggctcgtctgtgggctacggat
cactatcagcctttacgaatatttgctggccatcttgctgatgtcacatgtacccggttt
caccccaactccaactatattgccacgggctcagcagacaggactgtacgactctgggat
gttctgaacgggaactgtgtaagaatcttcactggacataagggaccaattcattcattg
gcattttctcctaatggacgattcctggctactggagcaacagatggaagagtgcttctg
tgggatattggccatggtttgatggtgggagagttgaaagggcacactgatacagtctat
gcactcagattcagtagagatggggaaattttagcatcaggttcaatggataacacagtc
cggctgtgggatgctgtgaaagtatttgaagacttagaaactgatgattttactacagcc
actggacatataaatctgcctgaaaactcacaggacttgctgttgggtacatacatgagc
aaatcaactccagtcatacacctccattttacccgcagaaacttgctactagcttcagga
gcatatagtccacaataa
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integrated database retrieval system
